Small molecules which mimic CDH1 OE
Canned Analysis
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General Information
AccessionDCA00020105
TitleSmall molecules which mimic CDH1 OE
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the gene expression signature induced by CDH1 OE in the MKN28 cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d2121ce467bea600fba974
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgregmicrotask
CREEDS IDgene:3056
Cell TypeMKN28
Gene Symbol (human)CDH1
Gene Symbol (mouse)Cdh1
Organismhuman
Perturbation TypeOE
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM806613, GSM806614, GSM806615
Perturbed SamplesGSM806619, GSM806620, GSM806621
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE32540
Gene Expression Omnibus
E-cadherin/CDH1 intron2 protein isoform overexpression in Mkn28 gastric tubular adenocarcinoma cell line
33
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