Interaction network and enrichment analysis of genes upregulated in Obstructive sleep apnea
Canned Analysis
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General Information
AccessionDCA00033160
TitleInteraction network and enrichment analysis of genes upregulated in Obstructive sleep apnea
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by Obstructive sleep apnea and healthy control cells in the Hepatic Tissue cell type.
Analysis URLhttp://genemania.org/#/search/mouse/Mt2|Gnmt|Fbp1|Me1|Aldob|Fasn|Ass1|Gapdh|Hbb-bs|Scd1|Uox|Cyp2a5|LOC100048117|Sult2a2|Eno1b|Sult1a1|Gstm3|Cyp17a1|Khk|Thrsp|Atp5b|Slc38a3|Trf|Msmo1|Elovl6
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:217
Cell TypeHepatic Tissue
Disease NameObstructive sleep apnea
Organismmouse
UMLS CUIC0520679
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM32860, GSM32861, GSM32862, GSM32863, GSM32864
Perturbed SamplesGSM32865, GSM32866, GSM32867, GSM32868, GSM32869
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE1873
Gene Expression Omnibus
Intermittent hypoxia effect on liver
7
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