Interaction network and enrichment analysis of genes upregulated in Viral cardiomyopathy
Canned Analysis
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General Information
AccessionDCA00033494
TitleInteraction network and enrichment analysis of genes upregulated in Viral cardiomyopathy
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by Viral cardiomyopathy and healthy control cells in the Myocardial tissue cell type.
Analysis URLhttp://genemania.org/#/search/human/GABARAPL3|ACTA1|CSRP3|EEF1A1P9|GJA1|LPL|SNHG5|MLLT11|RPS4Y1|LDHA|HNRNPA1P10|GPX3|XIRP1|APOD|HSPA8|TIMMDC1|GOT2|ANKRD1|FLNC|GHITM|ADI1|UNC45B|PSMA1|C14orf166|TYRP1
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:384
Cell TypeMyocardial tissue
Disease NameViral cardiomyopathy
Organismhuman
UMLS CUIC0264797
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM94831, GSM94854, GSM94855, GSM94870
Perturbed SamplesGSM94836, GSM94837, GSM94838, GSM94839, GSM94840, GSM94841, GSM94842, GSM94843
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE4172
Gene Expression Omnibus
Inflammatory dilated cardiomyopathy
7
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