Interaction network and enrichment analysis of genes upregulated in Human immunodeficiency virus infectious disease
Canned Analysis
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General Information
| Accession | DCA00033564 |
| Title | Interaction network and enrichment analysis of genes upregulated in Human immunodeficiency virus infectious disease |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by Human immunodeficiency virus infectious disease and healthy control cells in the T lymphocyte cell type. |
| Analysis URL | http://genemania.org/#/search/human/DEFA1B|KLF2|ISG15|MYL12B|TRAC|TMSB4XP8|TMSB10|PFN1|TXNIP|GZMA|B2M|RPS2|LTB|TRBC1|RARRES3|GPR183|C4orf46|IL32|PSME2|CFL1|TRIM22|MAT2B|HLA-J|IFI44L|NACAP1 |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | Joel.Dudley |
| CREEDS ID | dz:419 |
| Cell Type | T lymphocyte |
| DO ID | DOID:526 |
| Disease Name | Human immunodeficiency virus infectious disease |
| Organism | human |
| UMLS CUI | C0019693 |
Characteristic Direction parameters
| Gene Set | upregulated |
| Gene Set Size | 50 |
| Control Samples | GSM155228, GSM155229, GSM155230, GSM155232, GSM155233, GSM155234, GSM155235, GSM155236, GSM155237, GSM155238 |
| Perturbed Samples | GSM154936, GSM155179, GSM155180, GSM155181, GSM155182, GSM155183, GSM155184, GSM155185, GSM155186, GSM155187, GSM155189, GSM155190, GSM155192, GSM155195, GSM155200, GSM155201, GSM155202, GSM155203, GSM155204, GSM155206, GSM155218, GSM155219, GSM155220, GS |
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