Interaction network and enrichment analysis of genes upregulated in alcohol abuse
Canned Analysis
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General Information
| Accession | DCA00033622 |
| Title | Interaction network and enrichment analysis of genes upregulated in alcohol abuse |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by alcohol abuse and healthy control cells in the endothelial cells and neurons from dorsolateral prefrontal cortex cell type. |
| Analysis URL | http://genemania.org/#/search/human/LOC389765|TRIM73|EOMES|TIGD1|HDHD2|BTAF1|CT45A2|P2RY14|ITIH4|DROSHA|C2orf80|LOC286437|LOC100130232|LOC100288009|LOC100510649|APOD|LOC100505656|BTN3A2|LMO2|RNF182|ZDHHC11|GPR19|LOC101930071|LEP|DFNA5 |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | vcogliani |
| CREEDS ID | dz:451 |
| Cell Type | endothelial cells and neurons from dorsolateral prefrontal cortex |
| DO ID | DOID:1574 |
| Disease Name | alcohol abuse |
| Organism | human |
| UMLS CUI | C0085762 |
Characteristic Direction parameters
| Gene Set | upregulated |
| Gene Set Size | 50 |
| Control Samples | GSM318415, GSM318419, GSM318425, GSM318426, GSM318427, GSM318428, GSM318429, GSM318433, GSM318436, GSM318440, GSM318441 |
| Perturbed Samples | GSM318410, GSM318411, GSM318412, GSM318413, GSM318414, GSM318416, GSM318417, GSM318418, GSM318420, GSM318421, GSM318422, GSM318423, GSM318424, GSM318430, GSM318431, GSM318432, GSM318434, GSM318435, GSM318437, GSM318438, GSM318439 |
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