Interaction network and enrichment analysis of genes downregulated in papillary thyroid carcinoma
Canned Analysis
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General Information
| Accession | DCA00034021 |
| Title | Interaction network and enrichment analysis of genes downregulated in papillary thyroid carcinoma |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by papillary thyroid carcinoma and healthy control cells in the Papillary thyroid carcinoma tumors (without a BRAF mutation) and Normal thyroid specimens cell type. |
| Analysis URL | http://genemania.org/#/search/human/REXO1L1P|HBA2|USP17L9P|ZNF595|RFC1|RN7SL2|SNORD57|USP17L20|USP17L6P|MT1F|HIST1H1E|UIMC1|LINC00965|KRTAP4-7|RPS28|KRTAP4-11|HIST1H4C|KRTAP4-9|RNU2-2P|MT1G|MT2A|TOB2|SNORD33|GAGE12D|RMRP |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | cadimo |
| CREEDS ID | dz:652 |
| Cell Type | Papillary thyroid carcinoma tumors (without a BRAF mutation) and Normal thyroid specimens |
| DO ID | DOID:3969 |
| Disease Name | papillary thyroid carcinoma |
| Organism | human |
| UMLS CUI | C0238463 |
Characteristic Direction parameters
| Gene Set | downregulated |
| Gene Set Size | 50 |
| Control Samples | GSM1327256, GSM1327257, GSM1327258, GSM1327259, GSM1327260, GSM1327261 |
| Perturbed Samples | GSM1327231, GSM1327232, GSM1327233, GSM1327234, GSM1327235, GSM1327236, GSM1327237, GSM1327238, GSM1327239, GSM1327240, GSM1327241 |
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