Interaction network and enrichment analysis of genes downregulated in hepatocellular carcinoma
Canned Analysis
FAIR Metrics
0 evaluations
General Information
| Accession | DCA00034037 |
| Title | Interaction network and enrichment analysis of genes downregulated in hepatocellular carcinoma |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by hepatocellular carcinoma and healthy control cells in the Tumor tissues and Adjacent non-tumorous tissues of Hepatocellular Carcinoma cell type. |
| Analysis URL | http://genemania.org/#/search/human/HAMP|CYP2C8|CYP1A2|CRP|CYP2E1|APOA2|CD81|HBB|ADH4|SCD|CYP4A11|MT2A|AHSG|AFM|DCXR|UGT2B10|ORM2|HBA2|SAA4|ADH1A|ECHS1|PLIN2|MT1A|IGFBP3|SULT2A1 |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | cadimo |
| CREEDS ID | dz:660 |
| Cell Type | Tumor tissues and Adjacent non-tumorous tissues of Hepatocellular Carcinoma |
| DO ID | DOID:684 |
| Disease Name | hepatocellular carcinoma |
| Organism | human |
| UMLS CUI | C0279607 |
Characteristic Direction parameters
| Gene Set | downregulated |
| Gene Set Size | 50 |
| Control Samples | GSM1398646, GSM1398648, GSM1398650, GSM1398652, GSM1398654, GSM1398656, GSM1398658, GSM1398660, GSM1398662, GSM1398664, GSM1398666, GSM1398668, GSM1398670, GSM1398672, GSM1398674, GSM1398676, GSM1398678, GSM1398680, GSM1398682, GSM1398684, GSM1398686, GSM |
| Perturbed Samples | GSM1398645, GSM1398647, GSM1398649, GSM1398651, GSM1398653, GSM1398655, GSM1398657, GSM1398659, GSM1398661, GSM1398663, GSM1398665, GSM1398667, GSM1398669, GSM1398671, GSM1398673, GSM1398675, GSM1398677, GSM1398679, GSM1398681, GSM1398683, GSM1398685, GSM |
Tools
used in the analysis
Datasets
used in the analysis
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.
