Interaction network and enrichment analysis of genes upregulated in lung squamous cell carcinoma
Canned Analysis
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General Information
| Accession | DCA00034234 |
| Title | Interaction network and enrichment analysis of genes upregulated in lung squamous cell carcinoma |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by lung squamous cell carcinoma and healthy control cells in the Primary lung tumor and Normal lung cell type. |
| Analysis URL | http://genemania.org/#/search/human/POU2AF1|CXCL13|CLCA2|ADH7|SERPINB3|MMP12|GIMAP4|TNFRSF17|THBS2|SERPINB4|PLEKHS1|HIST1H1A|CXCL9|ADAMDEC1|MXRA5|POSTN|DAPL1|C12orf54|KRT6B|SERPINB13|CD48|MMP10|CD163|GIMAP5|AIF1 |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | cadimo |
| CREEDS ID | dz:734 |
| Cell Type | Primary lung tumor and Normal lung |
| DO ID | DOID:3907 |
| Disease Name | lung squamous cell carcinoma |
| Organism | human |
| UMLS CUI | C0149782 |
Characteristic Direction parameters
| Gene Set | upregulated |
| Gene Set Size | 50 |
| Control Samples | GSM1253940, GSM1253941, GSM1253942, GSM1253943 |
| Perturbed Samples | GSM1253912, GSM1253913, GSM1253914, GSM1253915, GSM1253916, GSM1253917, GSM1253918, GSM1253919, GSM1253920, GSM1253921, GSM1253922, GSM1253923, GSM1253924, GSM1253925, GSM1253926, GSM1253927, GSM1253928, GSM1253929, GSM1253930, GSM1253931, GSM1253932, GSM |
Tools
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Datasets
used in the analysis
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