Interaction network and enrichment analysis of genes upregulated in Ischemic stroke
Canned Analysis
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General Information
| Accession | DCA00034444 |
| Title | Interaction network and enrichment analysis of genes upregulated in Ischemic stroke |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by Ischemic stroke and healthy control cells in the Peripheral blood mononuclear cells (collected from IS patients at least 6 months after the first and only stroke event) cell type. |
| Analysis URL | http://genemania.org/#/search/human/RPS4Y1|LYZ|ND2|HBD|DEFA1B|ZFP36|NFKBIA|SH3KBP1|RPS25|CXCR4|RPL21|NCOA4|CCL3L3|DCAF6|RPSA|RPL9|IER3|GLRX5|RPL30|RPL27|IER2|COX2|F13A1|EEF1A1P9|MXI1 |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | cadimo |
| CREEDS ID | dz:856 |
| Cell Type | Peripheral blood mononuclear cells (collected from IS patients at least 6 months after the first and only stroke event) |
| Disease Name | Ischemic stroke |
| Organism | human |
| UMLS CUI | C0948008 |
Characteristic Direction parameters
| Gene Set | upregulated |
| Gene Set Size | 50 |
| Control Samples | GSM554014, GSM554015, GSM554016, GSM554017, GSM554018, GSM554019, GSM554020, GSM554021, GSM554022, GSM554023, GSM554024, GSM554025, GSM554026, GSM554027, GSM554028, GSM554029, GSM554030, GSM554031, GSM554032, GSM554033 |
| Perturbed Samples | GSM554034, GSM554035, GSM554036, GSM554037, GSM554038, GSM554039, GSM554040, GSM554041, GSM554042, GSM554043, GSM554044, GSM554045, GSM554046, GSM554047, GSM554048, GSM554049, GSM554050, GSM554051, GSM554052, GSM554053 |
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