Interaction network and enrichment analysis of genes downregulated in MYC JoMa1 cells are pluripotent precursor cells, derived from the ne
Canned Analysis
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General Information
AccessionDCA00036829
TitleInteraction network and enrichment analysis of genes downregulated in MYC JoMa1 cells are pluripotent precursor cells, derived from the ne
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between MYC JoMa1 cells are pluripotent precursor cells, derived from the ne cells and control cells in the JoMa1 cell type.
Analysis URLhttp://genemania.org/#/search/mouse/Bex1|Tmsb4x|F2r|Gm3601|Hmgn2-ps1|Hspd1|Mest|Cdh11|Ftl1|Fabp5|Rpl22l1|Tmem176b|Psat1|Hmga1-rs1|Fbl|Foxg1|Ftl2|Gm6793|Ifi30|Hsp90ab1|Prmt1|Hnrnpu|Set|Mrpl22|Atp5a1
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatormtahay
CREEDS IDgene:1273
Cell TypeJoMa1
Gene Symbol (human)MYC
Gene Symbol (mouse)Myc
Organismmouse
Perturbation TypeJoMa1 cells are pluripotent precursor cells, derived from the ne
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size50
Control SamplesGSM671403, GSM671404, GSM671405, GSM671406
Perturbed SamplesGSM671407, GSM671408, GSM671409, GSM671410
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE27159
Gene Expression Omnibus
Expression profiling of the murine neural crest precursor cell line, JoMa1
7
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