Interaction network and enrichment analysis of genes downregulated
Canned Analysis
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General Information
AccessionDCA00036961
TitleInteraction network and enrichment analysis of genes downregulated
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between
Analysis URLhttp://genemania.org/#/search/mouse/Rex2|Rpl39l|Pcna|Zfp42|Tdh|Dnmt3l|Pnp|Gm4340|Pou5f1|Asna1|Ftl1|Stmn1|Trim28|Senp3|Chchd10|Gsta4|Zbed5|Trap1a|Nr0b1|Tipin|Eif4a2|Dpy30|Akr1b8|Lgals3|Hspb1
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorFabioAmaral
CREEDS IDgene:1352
Cell TypeES cells
Gene Symbol (mouse)Panct1
Organismmouse
Perturbation TypeKD
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size50
Control SamplesGSM738388, GSM738389, GSM738390
Perturbed SamplesGSM738385, GSM738386, GSM738387
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE29798
Gene Expression Omnibus
A combined RNAi and localization approach for dissecting long noncoding RNAs reveals a function of Panct1 in ES cells
7
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