Interaction network and enrichment analysis of genes upregulated in BATF KO
Canned Analysis
FAIR Metrics
0 evaluations
General Information
| Accession | DCA00037224 |
| Title | Interaction network and enrichment analysis of genes upregulated in BATF KO |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between BATF KO cells and control cells in the 3 day in vitro effector CD8+ T cells--Naïve CD8+ T cells (P14 TCR transgenic C57Bl/6) were stimulated with plate-bound anti-CD3 (4 mg/ml, clone 2C11, BD Pharmingen) and anti-CD28 (4 mg/ml, clone 37.51, BD Pharmingen) in the presence of recombinant human IL-2 (100 U/ml, R&D Systems) cell type. |
| Analysis URL | http://genemania.org/#/search/mouse/Hist1h2ao|Lgals3|E430024C06Rik|Erdr1|Ifitm1|Ifi27l2a|Ly6c2|F2r|Rnaset2a|Scd2|H2-Q7|Ranbp1|Nkg7|Gzmb|Gvin1|Emilin2|Syce2|Gm17767|Psme2|Cd52|Eomes|LOC100504949|Gm5805|Psma2|Pcbp1 |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | gszeto |
| CREEDS ID | gene:1523 |
| Cell Type | 3 day in vitro effector CD8+ T cells--Naïve CD8+ T cells (P14 TCR transgenic C57Bl/6) were stimulated with plate-bound anti-CD3 (4 mg/ml, clone 2C11, BD Pharmingen) and anti-CD28 (4 mg/ml, clone 37.51, BD Pharmingen) in the presence of recomb |
| Gene Symbol (human) | BATF |
| Gene Symbol (mouse) | Batf |
| Organism | mouse |
| Perturbation Type | KO |
Characteristic Direction parameters
| Gene Set | upregulated |
| Gene Set Size | 50 |
| Control Samples | GSM1310344, GSM1310345, GSM1310346, GSM1310347 |
| Perturbed Samples | GSM1310348, GSM1310349, GSM1310350, GSM1310351 |
Tools
used in the analysis
Datasets
used in the analysis
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.
