Interaction network and enrichment analysis of genes upregulated in FOXP1 KD
Canned Analysis
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General Information
AccessionDCA00037598
TitleInteraction network and enrichment analysis of genes upregulated in FOXP1 KD
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between FOXP1 KD cells and control cells in the cell type: umbilical cord endothelial cells (HUVEC) passage: 4 cell type.
Analysis URLhttp://genemania.org/#/search/human/SIRT6|RPL41|RPLP1|RPL13A|RPS20P27|RPL38|PYCR2|EDN1|MTRNR2L6|RPS16|MIF|SPARC|CD63|RPS27L|ARPC2|RPL36|SEPW1|ATP5G2|RPS29|GPX1|RPS8|RPL37A|HSPB1|RPS27|NDUFAF3
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:1809
Cell Typecell type: umbilical cord endothelial cells (HUVEC) passage: 4
Gene Symbol (human)FOXP1
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM816568, GSM816569, GSM816570
Perturbed SamplesGSM816571, GSM816572, GSM816573
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE32968
Gene Expression Omnibus
Gene expression in human umbilical cord endothelial cells following FoxP1 knockdown
7
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