Interaction network and enrichment analysis of genes downregulated
Canned Analysis
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General Information
AccessionDCA00037709
TitleInteraction network and enrichment analysis of genes downregulated
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between
Analysis URLhttp://genemania.org/#/search/mouse/Lce1c|Lor|Gm94|Krtdap|Sbsn|Lce1i|Lce1m|Crct1|Krt1|Eif3f|Dmkn|Hbb-bs|Hspb1|Rps3a2|Krt79|Flg|Asprv1|Rpl31|2310011E23Rik|Rpl17-ps9|Eef1a1|Rpl7a|Kprp|Fam25c|Rpl39-ps
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorcadimo
CREEDS IDgene:188
Cell Typeembryonic skin
Gene Symbol (mouse)Atf7ip2
Organismmouse
Perturbation TypeDeficiency
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size50
Control SamplesGSM177486, GSM177491, GSM177492
Perturbed SamplesGSM177490, GSM177547, GSM177548
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE7381
Gene Expression Omnibus
Epithelial transcription factor Get-1 deficiency effect on embryonic skin
7
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