Interaction network and enrichment analysis of genes upregulated in NR2F2 KD
Canned Analysis
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General Information
AccessionDCA00038134
TitleInteraction network and enrichment analysis of genes upregulated in NR2F2 KD
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between NR2F2 KD cells and control cells in the cell line: ES2 cell type: Ovarian cancer cell line cell type.
Analysis URLhttp://genemania.org/#/search/human/KRT81|PLAT|LOX|PLAU|ACTB|TNFRSF12A|LPXN|TUBA1B|RPL27|TM4SF1|SERPINB2|FOXD1|ANXA1|CNN3|ACTG1|DUSP5|RPS2|RPS11|EEF1A1|ALDH1A3|LASP1|CALM2|YWHAQ|S100A6|COLEC12
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2217
Cell Typecell line: ES2 cell type: Ovarian cancer cell line
Gene Symbol (human)NR2F2
Gene Symbol (mouse)Nr2f2
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM1149535, GSM1149537, GSM1149539
Perturbed SamplesGSM1149534, GSM1149536, GSM1149538
Tools used in the analysis
Keyword
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Datasets used in the analysis
Keyword
Tool Name
GSE47438
Gene Expression Omnibus
Expression and functional pathway analysis of nuclear receptor NR2F2 in Ovarian cancer
14
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