Interaction network and enrichment analysis of genes upregulated in WNT1 OE
Canned Analysis
FAIR Metrics
0 evaluations
General Information
AccessionDCA00038352
TitleInteraction network and enrichment analysis of genes upregulated in WNT1 OE
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between WNT1 OE cells and control cells in the M24met melanoma cell-line cell type.
Analysis URLhttp://genemania.org/#/search/human/TGFBI|TMSB10|COL6A3|CTHRC1|ACTB|H3F3AP4|CSRP2|ADM|CD63|HTRA1|CHN1|NET1|ADD3|SH3KBP1|MRPS6|IGFBP3|PGAM1|PLS3|MLLT11|RNF149|SCG2|PFN2|MFAP2|GEM|MARCKSL1
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgszeto
CREEDS IDgene:2356
Cell TypeM24met melanoma cell-line
Gene Symbol (human)WNT1
Gene Symbol (mouse)Wnt1
Organismhuman
Perturbation TypeOE
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM656300, GSM656301, GSM656302, GSM656303, GSM656304
Perturbed SamplesGSM656305, GSM656306, GSM656307, GSM656308, GSM656309
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE26656
Gene Expression Omnibus
Gene expression profiles of Wnt-1 overexpressing melanoma
14
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.