Interaction network and enrichment analysis of genes downregulated in NR2C2 KD
Canned Analysis
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General Information
AccessionDCA00038783
TitleInteraction network and enrichment analysis of genes downregulated in NR2C2 KD
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between NR2C2 KD cells and control cells in the HuT-102 cells cell type.
Analysis URLhttp://genemania.org/#/search/human/CCL3L3|LOC728026|DEK|HIST1H2BK|RRM2|LBR|DUSP2|CA2|PTMA|DNAJB11|G0S2|ARF4|ANP32E|MORF4L1|FAM35A|TMEM123|FAM72A|BTBD1|MSMO1|CCT6A|TOMM20|IARS|PMAIP1|USP1|NACAP1
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorBodolino
CREEDS IDgene:2628
Cell TypeHuT-102 cells
Gene Symbol (human)NR2C2
Gene Symbol (mouse)Nr2c2
Organismhuman
Perturbation TypeKD
Characteristic Direction parameters
Gene Setdownregulated
Gene Set Size50
Control SamplesGSM407316, GSM407317
Perturbed SamplesGSM407318, GSM407319
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE16219
Gene Expression Omnibus
Identification of genes that are regulated by TAK1 in human cutaneous T cell lymphoma HuT-102 cells
7
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