Interaction network and enrichment analysis of genes upregulated
Canned Analysis
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General Information
AccessionDCA00039044
TitleInteraction network and enrichment analysis of genes upregulated
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between
Analysis URLhttp://genemania.org/#/search/mouse/Clu|Gsta1|Apoa2|Alas1|Krt8|H19|Gsta2|Trf|Anxa2|Serpina1b|Rplp1|Ttr|Apoa1|C3|Ahsg|Lrg1|Rpl41|Igf2|Tuba1b|Tgm2|Fth1|Ctsb|Mif|Cstb|Rps20
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorTolen
CREEDS IDgene:2794
Cell TypeLiver
Gene Symbol (mouse)Map3k7
Organismmouse
Perturbation TypeKO
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM1256112, GSM1256113
Perturbed SamplesGSM1256114, GSM1256115
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE51962
Gene Expression Omnibus
TGF-activated kinase 1 deficiency effect on liver
7
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