Interaction network and enrichment analysis of genes upregulated in NFIX KD
Canned Analysis
FAIR Metrics
0 evaluations
General Information
AccessionDCA00039080
TitleInteraction network and enrichment analysis of genes upregulated in NFIX KD
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between NFIX KD cells and control cells in the hematopoietic stem and progenitor cells cell type.
Analysis URLhttp://genemania.org/#/search/mouse/Cd74|Tyrobp|Mpo|Cd52|Lgals1|Sh3bgrl3|Ly6e|Tmsb10|Rogdi|Malat1|Mpeg1|Plac8|Tmsb4x|Lsp1|Grn|Ctss|Irf8|Fcer1g|Sun2|H2-Eb1|Ly6a|Laptm5|Cfp|Rpl13|Ms4a4c
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorKathaLahl
CREEDS IDgene:2846
Cell Typehematopoietic stem and progenitor cells
Gene Symbol (human)NFIX
Gene Symbol (mouse)Nfix
Organismmouse
Perturbation TypeKD
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM1105587, GSM1105588, GSM1105589
Perturbed SamplesGSM1105590, GSM1105591, GSM1105592
Tools used in the analysis
Keyword
Dataset Accession
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Datasets used in the analysis
Keyword
Tool Name
GSE45492
Gene Expression Omnibus
Nfix is a novel regulator of murine hematopoietic stem and progenitor cell survival
7
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.