Interaction network and enrichment analysis of genes downregulated in IKBKB expression of a constitutively active allele of the IÎ&ord
Canned Analysis
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General Information
AccessionDCA00039271
TitleInteraction network and enrichment analysis of genes downregulated in IKBKB expression of a constitutively active allele of the IÎ&ord
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between IKBKB expression of a constitutively active allele of the IÎ&ord cells and control cells in the Ramos cells; cell type: human Burkitt lymphoma; dsmz no.: ACC 603 origin: established from the ascitic fluid of a 3-year-old boy with American-type Burkitt lymphoma in 1972; cells were described to be EBV-negative but EBV infectible, to carry the (8;14) translocation and p53 mutations cell type.
Analysis URLhttp://genemania.org/#/search/human/IGJ|TCL1A|TOP2B|HMGB1|IGLL1|KIAA0226L|CCNB1IP1|VPREB1|RPS25|CKS1B|HNRNPA1P10|OAZ1|ID3|EIF3E|TRAM1|CCL4|TUBA1A|CXCR4|CD81|HIST1H4C|RPL36A|FAM72A|RCSD1|HMGN2|SRP9
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curator
CREEDS ID
Cell Type
Gene Symbol (human)
Gene Symbol (mouse)
Organism
Perturbation Type
Characteristic Direction parameters
Gene Set
Gene Set Size
Control Samples
Perturbed Samples
Tools used in the analysis

Keyword
Dataset Accession

GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis

Keyword
Tool Name

GSE17129
The IKK2/NF-kB-pathway suppresses MYC-induced lymphomagenesis
7
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