Interaction network and enrichment analysis of genes downregulated in IFNL3 mutant (SNP polymorphism)
Canned Analysis
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General Information
| Accession | DCA00039477 |
| Title | Interaction network and enrichment analysis of genes downregulated in IFNL3 mutant (SNP polymorphism) |
| Description | The analysis explores the gene interaction network and pathway enrichment of the top 50 most downregulated genes identified by applying the Characteristic Direction method comparing gene expression between IFNL3 mutant (SNP polymorphism) cells and control cells in the Analysis of resected liver from hepatocellular carcinoma (HCC) patients with chronic hepatitis C (CHC) cell type. |
| Analysis URL | http://genemania.org/#/search/human/CRP|FABP1|FGL1|PLA2G2A|HSPA1B|SAA2|G6PC|HSP90AA1|ALB|SERPINA7|LECT2|CYP3A5|NNMT|IGFBP1|SPINK1|PHYH|ITIH3|ORM1|H19|VTN|CYP2A6|CYP2E1|LOC100510047|SERPINF1|HSPA1A |
| Upload Date | September 20, 2017 |
| Uploader | maayanlab |
Metadata
| Analysis Curator | VICENTE |
| CREEDS ID | gene:3109 |
| Cell Type | Analysis of resected liver from hepatocellular carcinoma (HCC) patients with chronic hepatitis C (CHC) |
| Gene Symbol (human) | IFNL3 |
| Gene Symbol (mouse) | Ifnl3 |
| Organism | human |
| Perturbation Type | mutant (SNP polymorphism) |
Characteristic Direction parameters
| Gene Set | downregulated |
| Gene Set Size | 50 |
| Control Samples | GSM1024521, GSM1024522, GSM1024523, GSM1024524, GSM1024525, GSM1024526, GSM1024527, GSM1024528, GSM1024529, GSM1024530, GSM1024531, GSM1024532, GSM1024533, GSM1024534, GSM1024535, GSM1024536, GSM1024537, GSM1024538, GSM1024539, GSM1024540 |
| Perturbed Samples | GSM1024541, GSM1024542, GSM1024543, GSM1024544, GSM1024545, GSM1024546, GSM1024547, GSM1024548, GSM1024549, GSM1024550, GSM1024551, GSM1024552, GSM1024553, GSM1024554, GSM1024555, GSM1024556, GSM1024557, GSM1024558, GSM1024559, GSM1024560 |
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