Interaction network and enrichment analysis of genes upregulated in MIR142 OE
Canned Analysis
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General Information
AccessionDCA00039696
TitleInteraction network and enrichment analysis of genes upregulated in MIR142 OE
DescriptionThe analysis explores the gene interaction network and pathway enrichment of the top 50 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between MIR142 OE cells and control cells in the Raji cells (B lymphocytes) cell type.
Analysis URLhttp://genemania.org/#/search/human/MGC10814|RPL22L1|YWHAB|GGT6|RPS24|FUT6|CD19|HSPE1|PSME2|SLC35E4|KLC3|ISG20|HIST1H4C|RPS12|DUT|POU2AF1|ARHGDIB|LRMP|RCOR2|RPS19|COX7C|OAZ1|LCE1D|RPL27|RPL37
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorlkwhite
CREEDS IDgene:497
Cell TypeRaji cells (B lymphocytes)
Gene Symbol (human)MIR142
Organismhuman
Perturbation TypeOE
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size50
Control SamplesGSM703270, GSM703271, GSM703272, GSM703273
Perturbed SamplesGSM703268, GSM703269, GSM703274, GSM703275
Tools used in the analysis
Keyword
Dataset Accession
GeneMANIA
Published June 2010
Biological network integration for gene prioritization and predicting gene function
7435
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE28456
Gene Expression Omnibus
miR-142-3p over-expression in the Raji B-cell line
7
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