Enrichment analysis of genes upregulated in swine influenza
Canned Analysis
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General Information
AccessionDCA00060358
TitleEnrichment analysis of genes upregulated in swine influenza
DescriptionAn enrichment analysis was performed on the top 500 most upregulated genes identified by applying the Characteristic Direction method comparing gene expression between cells affected by swine influenza and healthy control cells in the peripheral blood cell type.
Analysis URLhttp://amp.pharm.mssm.edu/Enrichr/enrich?dataset=1bt6c
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorvcogliani
CREEDS IDdz:514
Cell Typeperipheral blood
DO IDDOID:0050211
Disease Nameswine influenza
Organismhuman
Characteristic Direction parameters
Gene Setupregulated
Gene Set Size500
Control SamplesGSM670463, GSM670464, GSM670465, GSM670466, GSM670467, GSM670468, GSM670469
Perturbed SamplesGSM670449, GSM670450, GSM670451, GSM670452, GSM670453, GSM670454, GSM670455, GSM670456, GSM670457, GSM670458, GSM670459, GSM670460, GSM670461, GSM670462
Tools used in the analysis
Keyword
Dataset Accession
Enrichr
Published May 2016
A comprehensive gene set enrichment analysis web server 2016 update
7759
65
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE27131
Gene Expression Omnibus
Severe pandemic H1N1 influenza effect on peripheral blood: time course
7
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