CySBML
Computational Tool
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General Information
DescriptionA Cytoscape plugin for SBML
Homepagehttp://www.charite.de/sysbio/people/koenig/software/cysbml/
Publications
CySBML: a Cytoscape plugin for SBML
Matthias König; Andreas Dräger; Hermann-Georg Holzhütter
Summary: CySBML is a plugin designed to work with Systems Biology Markup Language (SBML) in Cytoscape having the following features: SBML import, support of the SBML layout and qualitative model packages, navigation in network layouts based on SBML structure, access to MIRIAM and SBO-based annotations and SBML validation. CySBML includes an importer for BioModels to load SBML from standard repositories.
Availability and implementation: Freely available for non-commercial purposes through the Cytoscape plugin manager or for download at http://sourceforge.net/projects/cysbml/.
Contact: cysbml-team@lists.sourceforge.net
Supplementary Information: Tutorial, usage guide, installation instructions and additional figures are available for download at http://www.charite.de/sysbio/people/koenig/software/cysbml/.
DOI: https://doi.org/10.1093/bioinformatics/bts432
Metrics:
6
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