Knime4Bio
Computational Tool
FAIR Metrics
0 evaluations
General Information
DescriptionA set of custom nodes for the interpretation of next-generation sequencing data with KNIME
Homepagehttp://code.google.com/p/knime4bio/
Publications
Knime4Bio: a set of custom nodes for the interpretation of next-generation sequencing data with KNIME
Pierre Lindenbaum; Solena Le Scouarnec; Vincent Portero; Richard Redon
Summary: Analysing large amounts of data generated by next-generation sequencing (NGS) technologies is difficult for researchers or clinicians without computational skills. They are often compelled to delegate this task to computer biologists working with command line utilities. The availability of easy-to-use tools will become essential with the generalization of NGS in research and diagnosis. It will enable investigators to handle much more of the analysis. Here, we describe Knime4Bio, a set of custom nodes for the KNIME (The Konstanz Information Miner) interactive graphical workbench, for the interpretation of large biological datasets. We demonstrate that this tool can be utilized to quickly retrieve previously published scientific findings.
Availability: http://code.google.com/p/knime4bio/.
Contact: richard.redon@univ-nantes.fr
DOI: https://doi.org/10.1093/bioinformatics/btr554
Metrics:
8
Canned Analyses generated by the tool
There are no indexed analyses by this tool at the moment.
Datasets analyzed by the tool
There are no indexed analyses by this tool at the moment.
FAIR Evaluation
Sorry, you must be signed in to evaluate this object.