General Information
| Description | An R package to predict protein–protein interaction networks for a set of proteins |
| Homepage | http://bioconductor.org/packages/Path2PPI |
Publications
Path2PPI: an R package to predict protein–protein interaction networks for a set of proteins
Summary
: We introduce Path2PPI, a new R package to identify protein–protein interaction (PPI) networks for fully sequenced organisms for which nearly none PPI are known. Path2PPI predicts PPI networks based on sets of proteins from well-established model organisms, providing an intuitive visualization and usability. It can be used to combine and transfer information of a certain pathway or biological process from several reference organisms to one target organism.
Availability and implementation
: Path2PPI is an open-source tool implemented in R. It can be obtained from the Bioconductor project: http://bioconductor.org/packages/Path2PPI/
Contact
: ina.koch@bioinformatik.uni-frankfurt.de
Supplementary information:
Supplementary data are available at Bioinformatics online.
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