GEO_WEEKLY_ANALYSIS gene signatures (33)

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Title Organism Platform Optional Metadata
1 Rb family triple knock out liver progenitor cells Mus musculus Mus musculus
Cell Liver
Cell subtype Liver progenitor cells
Perturbation Tamoxifen treatment
Perturbation specification Tamoxifen-induced Rb ...
Concentration 1 mgr/day
Time 5 days
2 Microbiota regulate the ability of lung ... Mus musculus Mus musculus
Cell Lung
Cell subtype Lung CD103+ dendritic ...
Condition Specific pathogen ...
3 Microbiota regulate the ability of lung ... Mus musculus Mus musculus
Cell Lung
Cell subtype Lung CD24+ dendritic ...
Condition Specific pathogen ...
4 Microbiota regulate the ability of lung ... Mus musculus Mus musculus
Cell Lung
Cell subtype Lung CD64+ macrophages
Condition Specific pathogen ...
5 Genome-wide analysis of bone marrow-derived ... Mus musculus Mus musculus
Cell Dendritic cells (DCs)
Cell subtype Bone marrow-derived ...
Perturbation Bifidobacterium
6 Genome-wide analysis of tumor-infiltrating ... Mus musculus Mus musculus
Cell Dendritic cells (DCs)
Condition Taconic farms DCs vs ...
7 Genome-wide analysis of tumor-infiltrating ... Mus musculus Mus musculus
Cell Dendritic cells (DCs)
Condition Taconic farms DCs vs ...
8 Genome-wide analysis of tumor-infiltrating ... Mus musculus Mus musculus
Cell Dendritic cells (DCs)
Condition Jackson Labortaory ...
9 Transcriptomic analysis of folic acid effects ... Mus musculus Mus musculus
Cell Heart
Cell subtype Heart - Left ventricle
Perturbation Folic acid
Concentration 10 mg/d
Time for 7 days
10 Expression profile of mouse carotid body and ... Mus musculus Mus musculus
Cell Carotid artery
Condition Carotid body vs ...
11 Transcriptomic analysis of folic acid effects ... Mus musculus Mus musculus
Cell Heart
Cell subtype Heart - Left
Perturbation 1 Folic acid
Perturbation 2 Doxorubicin
Concentration 1 10 mg/d
Concentration 2 20 mg/kg
Time 1 for 7 days
Time 2 at day 10 (only 1 time)
12 Expression data from mouse calvarial suture ... Mus musculus Mus musculus
Cell Mesenchymal cells
Cell Axin2 + expressing ...
Perturbation type Axin -
Gene AXIN2
Entrez gene 8313
13 Brown fat-specific YY1 deficiency effect on ... Mus musculus Mus musculus
Cell Adipocyte
Cell subtype Visceral white ...
Perturbation Knockout
Gene YY1a
Entrez gene 7528
14 Brown Adipose YY1 Deficiency Activates ... Mus musculus Mus musculus
Cell Adipocyte
Cell subtype Subcutaneous brown ...
Perturbation Knockout
Gene YY1b
Entrez gene 7528
Relevant information Fed a high fat diet ...
15 Brown Adipose YY1 Deficiency Activates ... Mus musculus Mus musculus
Cell Adipocyte
Cell subtype Brown adipose tissue
Perturbation Knockout
Gene YY1b
Entrez gene 7528
Relevant information Fed a high fat diet ...
16 Topaz1, a germ cell specific factor essential ... Mus musculus Mus musculus
Cell Testis (15 dpp)
Perturbation Knockout
Gene TOPAZ1
Entrez gene 375337
17 Topaz1, a germ cell specific factor essential ... Mus musculus Mus musculus
Cell Testis (20 dpp)
Perturbation Knockout
Gene TOPAZ1
Entrez gene 375337
18 Mammary Gland from hNAG-1 overexpressing mice Mus musculus Mus musculus
Cell Mammary Gland
Perturbation Overexpression
Gene NAG1 (hNAG1)
Entrez gene 9518
19 gene expression analysis in Pbx1; Emx1-cre ... Mus musculus Mus musculus
Cell Cortex
Perturbation Pbx1 mutant
Developmental stage E12.5
20 Loss of Ezh2 promotes a midbrain-to-forebrain ... Mus musculus Mus musculus
Cell Brain
Cell subtype Dorsal midbrain
Perturbation Knockout
Gene EZH2
Entrez gene 2146
Developmental stage E10.5
21 gene expression analysis in Pbx1; Emx1-cre ... Mus musculus Mus musculus
Cell Cortex
Perturbation Emx1-cre mutant
Developmental stage E12.5
22 Assessing concordance of drug-induced ... Rattus norvegicus Rattus norvegicus
Cell Liver
Time 0 hrs
Relevant information Liver in situ ...
23 Assessing concordance of drug-induced ... Rattus norvegicus Rattus norvegicus
Cell Liver
Time 4 hrs
Relevant information Liver in situ ...
24 Assessing concordance of drug-induced ... Rattus norvegicus Rattus norvegicus
Cell Liver
Time 24 hrs
Relevant information Liver in situ ...
25 Assessing concordance of drug-induced ... Rattus norvegicus Rattus norvegicus
Cell Liver
Time 48 hrs
Relevant information Liver in situ ...
26 Assessing concordance of drug-induced ... Rattus norvegicus Rattus norvegicus
Cell Liver
Cell subtype Liver primary ...
Time 4 hrs
Relevant information Isolated samples from ...
27 Assessing concordance of drug-induced ... Rattus norvegicus Rattus norvegicus
Cell Liver
Cel subtype Liver primary ...
Time 24 hrs
Relevant information Isolated samples from ...
28 Gene expression profiling reveals a novel ... Mus musculus Mus musculus
Cell Trophoblast stem cell ...
Relevant information Trophoblast stem cell ...
29 Assessing concordance of drug-induced ... Rattus norvegicus Rattus norvegicus
Cell Liver
Cell subtype Liver primary ...
Time 48 hrs
Relevant information Isolated samples from ...
30 Gene expression profiling reveals a novel ... Mus musculus Mus musculus
Cell Trophoblast stem cell ...
Relevant information Trophoblast stem cell ...
31 Gene expression profiling reveals a novel ... Mus musculus Mus musculus
Cell Trophoblast stem cell ...
Relevant information Trophoblast stem cell ...
32 Transcriptional effects of CTGF inhibition in ... Mus musculus Mus musculus
Cell Heart
Perturbation PKCε transgenic
Relevant information IgG treated FVB/N ...
33 Transcriptional effects of CTGF inhibition in ... Mus musculus Mus musculus
Cell Heart
Perturbation PKCε transgenic
Disease FG-3149 treated FVB/N ...