Harmonizome 3.0

mental retardation, non-syndromic, autosomal recessive, 28

mental retardation, non-syndromic, autosomal recessive, 24

mental retardation, non-syndromic, autosomal recessive, 23

mental retardation, non-syndromic, autosomal recessive, 10

mental retardation, non-syndromic, autosomal recessive, 17

mental retardation, non-syndromic, autosomal recessive, 11

mental retardation, non-syndromic, autosomal recessive, 19

mental retardation, non-syndromic, autosomal recessive, 8

mental retardation, non-syndromic, autosomal recessive, 9

mental retardation, non-syndromic, autosomal recessive, 25

mental retardation, non-syndromic, autosomal recessive, 4

mental retardation, non-syndromic, autosomal recessive, 27

optic atrophy 6 (autosomal recessive)

optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)

The mouse ortholog of this protein co-purifies with the mitochondrial inner membrane. Mutations in this gene have been shown to result in 3-methylglutaconic aciduria type III and autosomal dominant optic atrophy and cataract. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2009]

spastic paraplegia 27 (autosomal recessive)

spastic paraplegia 25 (autosomal recessive, with disc herniation)

spastic paraplegia 24 (autosomal recessive)

spastic paraplegia 21 (autosomal recessive, Mast syndrome)

The protein encoded by this gene binds to the hydrophobic C-terminal amino acids of CD4 which are involved in repression of T cell activation. The interaction with CD4 is mediated by the noncatalytic alpha/beta hydrolase fold domain of this protein. It is thus proposed that this gene product modulates the stimulatory activity of CD4. Mutations in this gene are associated with autosomal recessive spastic paraplegia 21 (SPG21), also known as mast syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2014]

spastic paraplegia 23 (autosomal recessive)

Mental retardation, autosomal recessive 29

deafness, autosomal recessive 45

deafness, autosomal recessive 20

deafness, autosomal recessive 26

deafness, autosomal recessive 27

myopia 18 (high grade, autosomal recessive)

This locus was identified by linkage in one consanguineous Chinese family to lie between D14S984 and D14S999. [provided by RefSeq, Feb 2010]

cardiomyopathy, restrictive 2A (autosomal recessive)

hypoacusis 2 (autosomal recessive)

Mental retardation, autosomal recessive 16

deafness, autosomal recessive 75

spinocerebellar ataxia, autosomal recessive 2

spinocerebellar ataxia, autosomal recessive 3

deafness, autosomal recessive 81

Cataract, autosomal recessive congenital 3

cataract, congenital nuclear, autosomal recessive

polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1

Predicted to enable signaling receptor activity. Predicted to be involved in immune response. Predicted to act upstream of or within sensory perception of sound. Predicted to be located in cytosol; extracellular space; and membrane. Implicated in autosomal recessive nonsyndromic deafness. [provided by Alliance of Genome Resources, Mar 2025]

spastic paraplegia 45 (autosomal recessive)

spastic paraplegia 7 (pure and complicated autosomal recessive)

This gene encodes a mitochondrial metalloprotease protein that is a member of the AAA family. Members of this protein family share an ATPase domain and have roles in diverse cellular processes including membrane trafficking, intracellular motility, organelle biogenesis, protein folding, and proteolysis. Mutations in this gene cause autosomal recessive spastic paraplegia 7. Two transcript variants encoding distinct isoforms have been identified. [provided by RefSeq, Mar 2014]

deafness, autosomal recessive 62

deafness, autosomal recessive 60

deafness, autosomal recessive 68

deafness, autosomal recessive 69

spastic paraplegia 11 (autosomal recessive)

The protein encoded by this gene is a potential transmembrane protein that is phosphorylated upon DNA damage. Defects in this gene are a cause of spastic paraplegia type 11 (SPG11). Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009]

dystonia 2, torsion (autosomal recessive)

deafness, autosomal recessive 85

This locus was defined by homozygosity mapping in a kindred of 42 enrolled individuals, between FAM18B2 and NF1. [provided by RefSeq, Feb 2010]

deafness, autosomal recessive 83

This locus, identified by homozygosity mapping, overlaps that of DFNA47. It may be that mutations of the same gene are responsible for recessive and dominant hearing loss. [provided by RefSeq, Feb 2010]

spastic paraplegia 14 (autosomal recessive)

Usher syndrome 2A (autosomal recessive, mild)

This gene encodes a protein that contains laminin EGF motifs, a pentaxin domain, and many fibronectin type III motifs. The protein is found in the basement membrane, and may be important in development and homeostasis of the inner ear and retina. Mutations within this gene have been associated with Usher syndrome type IIa and retinitis pigmentosa. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2008]

Mental retardation, autosomal recessive 33

Mental retardation, autosomal recessive 32

Mental retardation, autosomal recessive 31

Mental retardation, autosomal recessive 30

Mental retardation, autosomal recessive 35

deafness, autosomal recessive 59

The protein encoded by this gene is a member of the gasdermin family, a family which is found only in vertebrates. The encoded protein is required for the proper function of auditory pathway neurons. Defects in this gene are a cause of non-syndromic sensorineural deafness autosomal recessive type 59 (DFNB59). [provided by RefSeq, Dec 2008]

deafness, autosomal recessive 57

deafness, autosomal recessive 56

deafness, autosomal recessive 55

erythrocytosis, autosomal recessive benign 2

retinitis pigmentosa 22 (autosomal recessive)

retinitis pigmentosa 29 (autosomal recessive)

myopathy, hyaline body, autosomal recessive

ichthyosis congenita III, vulgaris-like recessive ichthyosis

cirrhosis, autosomal recessive 1A (cirhin)

This gene encodes a WD40-repeat-containing protein that is localized to the nucleolus. Mutation of this gene causes North American Indian childhood cirrhosis, a severe intrahepatic cholestasis that results in transient neonatal jaundice, and progresses to periportal fibrosis and cirrhosis in childhood and adolescence. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016]

retinitis pigmentosa 32 (autosomal recessive)

deafness, autosomal recessive 66

deafness, autosomal recessive 65

deafness (recessive, nonsyndromic) modifier 1

deafness, autosomal recessive 58

deafness, autosomal recessive 50

deafness, autosomal recessive 71

Usher syndrome 1K (autosomal recessive)

Spinal muscular atrophy, chronic distal, autosomal recessive

deafness, autosomal recessive 5

Ataxia, spastic, 3, autosomal recessive

deafness, autosomal recessive 38

deafness, autosomal recessive 31

This gene is thought to function in the organization and stabilization of sterocilia elongation and actin cystoskeletal assembly, based on studies of the related mouse gene. Mutations in this gene have been associated with autosomal recessive non-syndromic deafness and Usher Syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2016]

deafness, autosomal recessive 33

deafness, autosomal recessive 32

deafness, autosomal recessive 34

deafness, autosomal recessive 19

deafness, autosomal recessive 44

Usher syndrome 1H (autosomal recessive)

Usher syndrome 1C (autosomal recessive, severe)

This gene encodes a scaffold protein that functions in the assembly of Usher protein complexes. The protein contains PDZ domains, a coiled-coil region with a bipartite nuclear localization signal and a PEST degradation sequence. Defects in this gene are the cause of Usher syndrome type 1C and non-syndromic sensorineural deafness autosomal recessive type 18. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2009]

Usher syndrome 1G (autosomal recessive)

This gene encodes a protein that contains three ankyrin domains, a class I PDZ-binding motif and a sterile alpha motif. The encoded protein interacts with harmonin, which is associated with Usher syndrome type 1C. This protein plays a role in the development and maintenance of the auditory and visual systems and functions in the cohesion of hair bundles formed by inner ear sensory cells. Mutations in this gene are associated with Usher syndrome type 1G (USH1G). Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2013]

Usher syndrome 1E (autosomal recessive, severe)

deafness, autosomal recessive 43

deafness, autosomal recessive 46

cataract, pulverulent (autosomal recessive, early-onset)

deafness, autosomal recessive 40

deafness, autosomal recessive 47

spastic paraplegia 32 (autosomal recessive)

deafness, autosomal recessive 51

ocular albinism 3 (autosomal recessive)

microphthalmia, autosomal recessive

spastic paraplegia 5B (autosomal recessive)

Ichthyosis, congenital, autosomal recessive 9

Ichthyosis, congenital, autosomal recessive 7

polycystic kidney and hepatic disease 1 (autosomal recessive)

The protein encoded by this gene is predicted to have a single transmembrane (TM)-spanning domain and multiple copies of an immunoglobulin-like plexin-transcription-factor domain. Alternative splicing results in two transcript variants encoding different isoforms. Other alternatively spliced transcripts have been described, but the full length sequences have not been determined. Several of these transcripts are predicted to encode truncated products which lack the TM and may be secreted. Mutations in this gene cause autosomal recessive polycystic kidney disease, also known as polycystic kidney and hepatic disease-1. [provided by RefSeq, Jul 2008]

deafness, autosomal recessive 13

deafness, autosomal recessive 17

deafness, autosomal recessive 14

hypodontia 2 (autosomal recessive)

oculocutaneous albinism 5 (autosomal recessive)

deafness, autosomal recessive 96