Downloads

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Resource Dataset Description Category Attribute Views Archived
Achilles Cell Line Gene Essentiality Profiles Fitness scores for cell lines following single gene knockdowns disease or phenotype associations cell line 25257 false
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles mRNA expression profiles for 6 adult human brain tissue samples spanning ~300 brain structures transcriptomics tissue 39010 false
Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles mRNA expression profiles for adult mouse brain tissues spanning ~2000 anatomically defined brain structures transcriptomics tissue 19658 false
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray mRNA expression profiles for human brain tissue samples spanning 27 time points and 26 brain structures transcriptomics tissue sample 9558 false
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq mRNA expression profiles for human brain tissue samples spanning 31 time points and 26 brain structures transcriptomics tissue sample 8575 false
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles mRNA expression profiles for 4 human prenatal brain tissue samples spanning 4 time points and ~300 brain structures transcriptomics tissue 10197 false
Biocarta Pathways Sets of proteins participating in pathways from Biocarta structural or functional annotations pathway 77666 false
BioGPS Cell Line Gene Expression Profiles mRNA expression profiles for the NCI-60 panel of cancer cell lines transcriptomics cell line 48763 false
BioGPS Human Cell Type and Tissue Gene Expression Profiles mRNA expression profiles for human tissues and cell types transcriptomics cell type or tissue 21190 false
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles mRNA expression profiles for mouse tissues and cell types transcriptomics cell type or tissue 24955 false
Cancer Cell Line Encyclopedia (CCLE) Cell Line Gene CNV Profiles Gene-level copy number variation profiles for cancer cell lines genomics cell line 37024 false
Cancer Cell Line Encyclopedia (CCLE) Cell Line Gene Expression Profiles mRNA microarray expression profiles for cancer cell lines transcriptomics cell line 120880 false
Cancer Cell Line Encyclopedia (CCLE) Cell Line Gene Mutation Profiles Gene-level mutation profiles for cancer cell lines genomics cell line 37484 false
ChIP-X Enrichment Analysis (ChEA) Transcription Factor Binding Site Profiles Transcription factor binding site profiles from published ChIP-chip, ChIP-seq, and other transcription factor functional studies genomics transcription factor binding site profile 30976 true
ChIP-X Enrichment Analysis (ChEA) Transcription Factor Targets Target genes of transcription factors from published ChIP-chip, ChIP-seq, and other transcription factor binding site profiling studies genomics transcription factor 96280 false
ClinVar Gene-Phenotype Associations SNP-phenotype associations curated by ClinVar users from various sources disease or phenotype associations phenotype 13556 false
Connectivity Map (CMAP) Signatures of Differentially Expressed Genes for Small Molecules mRNA expression profiles for cell lines following chemical perturbation transcriptomics small molecule perturbation 15055 false
COMPARTMENTS Curated Protein Localization Evidence Scores Protein subcellular localization evidence scores by manual literature curation structural or functional annotations cellular component 7666 true
COMPARTMENTS Experimental Protein Localization Evidence Scores Protein subcellular localization evidence scores by integrating experimental data proteomics cellular component 4518 true
COMPARTMENTS Text-mining Protein Localization Evidence Scores Gene-cellular compartment co-occurrence scores from text-mining biomedical abstracts structural or functional annotations cellular component 9260 true
CORUM Protein Complexes Proteins participating in complexes by manual literature curation structural or functional annotations protein complex 17708 false
Catalogue of Somatic Mutations In Cancer (COSMIC) Cell Line Gene CNV Profiles Gene-level copy number variation profiles for cancer cell lines genomics cell line 14617 false
Catalogue of Somatic Mutations In Cancer (COSMIC) Cell Line Gene Mutation Profiles Gene mutations in cancer cell lines from low-throughput or high-throughput studies genomics cell line 27342 false
Comparative Toxicogenomics Database (CTD) Gene-Chemical Interactions Chemical-gene interactions curated from literature physical interactions chemical 23655 false
Comparative Toxicogenomics Database (CTD) Gene-Disease Associations Disease-gene interactions from manually curated literature disease or phenotype associations disease 33735 false
Database of Genotypes and Phenotypes (dbGAP) Gene-Trait Associations Gene-trait associations curated from genetic association studies disease or phenotype associations trait 9000 false
Dephosphorylation Database (DEPOD) Substrates of Phosphatases Phosphatase-substrate interactions manually curated from literature and databases of protein annotations or protein interactions physical interactions phosphatase 4601 false
DISEASES Curated Gene-Disease Association Evidence Scores Disease gene evidence scores by manual literature curation disease or phenotype associations disease 8859 true
DISEASES Experimental Gene-Disease Association Evidence Scores Disease gene evidence scores by integrating experimental data (GWAS) disease or phenotype associations disease 11454 true
DISEASES Text-mining Gene-Disease Association Evidence Scores Gene-disease co-occurrence scores from text-mining biomedical abstracts disease or phenotype associations disease 36981 true
DrugBank Drug Targets Sets of proteins targeted by drugs by manual literature curation physical interactions drug 36953 false
Encyclopedia of DNA Elements (ENCODE) Histone Modification Site Profiles Histone site modification profiles for cell lines from ENCODE genomics histone modification site profile 9346 false
Encyclopedia of DNA Elements (ENCODE) Transcription Factor Binding Site Profiles Transcription factor binding site profiles for cell lines genomics transcription factor binding site profile 21606 false
Encyclopedia of DNA Elements (ENCODE) Transcription Factor Targets Target genes of transcription factors from transcription factor binding site profiles genomics transcription factor 137452 false
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells Sets of target genes of transcription factors from published ChIP-chip, ChIP-seq, and other transcription factor binding site profiling studies;sets of differentially expressed genes following perturbation of a protein from gene expression data in GEO; sets of interacting proteins from high- and low-throughput protein-protein interaction studies; sets of targets of microRNAs from public databases, computationally predicted or experimentally verified transcriptomics PubMedID 6188 false
Genetic Association Database (GAD) Gene-Disease Associations Gene-disease associations curated from genetic association studies disease or phenotype associations disease 37778 false
Genetic Association Database (GAD) High Level Gene-Disease Associations Gene-disease associations curated from genetic association studies disease or phenotype associations disease 7959 false
Genomics of Drug Sensitivity in Cancer (GDSC) Cell Line Gene Expression Profiles mRNA microarray expression profiles for cancer cell lines transcriptomics cell line 17994 false
Gene Reference Into Function (GeneRIF) Biological Term Annotations Statements describing functions of genes distilled from biomedical publications structural or functional annotations biological term 32042 false
GeneSigDB Published Gene Signatures Gene signatures reported in the literature that were derived from analysis of transcriptomic or proteomic data transcriptomics PubMedID 8749 false
Gene Expression Omnibus (GEO) Signatures of Differentially Expressed Genes for Diseases mRNA expression profiles for cell lines or tissues following disease perturbation transcriptomics disease perturbation 15711 false
Gene Expression Omnibus (GEO) Signatures of Differentially Expressed Genes for Gene Perturbations mRNA expression profiles for cell lines or tissues following genetic perturbation (knockdown, knockout, over-expression, mutation) transcriptomics gene perturbation 8980 false
Gene Expression Omnibus (GEO) Signatures of Differentially Expressed Genes for Kinase Perturbations mRNA expression profiles for cell lines or tissues following kinase perturbation (inhibition, activation, knockdown, knockout, over-expression, mutation) transcriptomics kinase perturbation 8724 false
Gene Expression Omnibus (GEO) Signatures of Differentially Expressed Genes for Small Molecules mRNA expression profiles for cell lines or tissues following small molecule perturbation transcriptomics small molecule perturbation 7544 false
Gene Expression Omnibus (GEO) Signatures of Differentially Expressed Genes for Transcription Factor Perturbations mRNA expression profiles for cell lines or tissues following transcription factor perturbation (inhibition, activation, knockdown, knockout, over-expression, mutation) transcriptomics transcription factor perturbation 13360 false
Gene Expression Omnibus (GEO) Signatures of Differentially Expressed Genes for Viral Infections mRNA expression profiles for cell lines or tissues following viral infection transcriptomics virus perturbation 9300 false
Gene Ontology (GO) Biological Process Annotations 2015 Curated annotations of genes with biological processes structural or functional annotations biological process 14824 true
Gene Ontology (GO) Cellular Component Annotations 2015 Curated annotations of genes with cellular components structural or functional annotations cellular component 8952 true
Gene Ontology (GO) Molecular Function Annotations 2015 Curated annotations of genes with molecular functions structural or functional annotations molecular function 8703 true
Genotype Tissue Expression (GTEx) eQTL Significance values for all gene-SNP pairs testing likelihood that SNP affects gene expression genomics SNP 7585 true
Genotype Tissue Expression (GTEx) Tissue Gene Expression Profiles Gene expression profiles for tissues from GTEx by RNA-seq transcriptomics tissue 16696 true
Genotype Tissue Expression (GTEx) Tissue Sample Gene Expression Profiles RNA-seq gene expression profiles for tissue samples from GTEx transcriptomics tissue sample 11462 false
Guide to Pharmacology Chemical Ligands of Receptors Chemical ligand-receptor interactions curated by experts physical interactions ligand (chemical) 12394 false
Guide to Pharmacology Protein Ligands of Receptors Protein ligand-receptor interactions curated by experts physical interactions ligand (protein) 3331 false
GWAS Catalog SNP-Phenotype Associations SNP-phenotype association p-values curated from published GWAS disease or phenotype associations phenotype 11277 false
GWASdb SNP-Disease Associations SNP-disease association p-values curated from published GWAS disease or phenotype associations disease 29971 false
GWASdb SNP-Phenotype Associations SNP-phenotype association p-values curated from published GWAS disease or phenotype associations phenotype 10685 false
Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles mRNA expression profiles for breast cancer cell lines measured by microarray transcriptomics cell line 6570 false
Human Metabolome Database Metabolites of Enzymes Biomolecular interactions between metabolites and proteins, such as processing enzymes, curated from literature physical interactions metabolite 11181 false
Human Protein Atlas (HPA) Cell Line Gene Expression Profiles RNA-seq gene expression profiles for cell lines from HPA transcriptomics cell line 11598 false
Human Protein Atlas (HPA) Tissue Gene Expression Profiles RNA-seq gene expression profiles for tissues from HPA transcriptomics tissue 13381 false
Human Protein Atlas (HPA) Tissue Protein Expression Profiles Semiquantitative protein expression profiles for tissues proteomics tissue 6014 false
Human Protein Atlas (HPA) Tissue Sample Gene Expression Profiles RNA-seq gene expression profiles for tissue samples from HPA transcriptomics tissue sample 5274 false
Human Proteome Map (HPM) Cell Type and Tissue Protein Expression Profiles Protein expression profiles for tissues and cell types proteomics cell type or tissue 4360 false
Human Phenotype Ontology (HPO) Gene-Disease Associations Phenotype-causing gene mutations of human phenotypes from disease knowledgebases disease or phenotype associations phenotype 27235 false
Hub Proteins Protein-Protein Interactions Sets of proteins interacting with hub proteins aggregated from data physical interactions hub protein 12941 false
HuGE Navigator Gene-Phenotype Associations Gene-phenotype associations extracted from published GWAS by automated text-mining disease or phenotype associations phenotype 13968 false
HumanCyc Pathways Sets of proteins participating in pathways from HumanCyc structural or functional annotations pathway 5395 false
InterPro Predicted Protein Domain Annotations Protein domains predicted for gene products based on sequence similarity to known domain signatures structural or functional annotations protein domain 15063 false
Jaspar PWMs Predicted Transcription Factor Targets Target genes of transcription factors predicted using known transcription factor binding site motifs genomics transcription factor 41173 false
Kinase Enrichment Analysis (KEA) Substrates of Kinases Protein substrates of kinases from published low-throughput and high-throughput phosphoproteomics studies physical interactions kinase 10056 false
Kyoto Encyclopedia of Genes and Genomes (KEGG) Pathways Sets of proteins participating in pathways from KEGG structural or functional annotations pathway 18588 false
LINCS Kinativ Kinase Inhibitor Bioactivity Profiles Percent inhibition of kinases by small molecules measured in cell lysates physical interactions chemical bioactivity profile 3142 false
LINCS KinomeScan Kinase Inhibitor Targets Kinase inhibitor targets from percent inhibition of kinases by small molecules measured using purified kinases physical interactions small molecule 5653 false
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles Gene-level copy number variation profiles for cancer cell lines genomics cell line 9135 false
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles RNA-seq gene expression profiles for cancer cell lines transcriptomics cell line 13911 false
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles SNP gene mutations in cancer cell lines identified by microarray genomics cell line 8718 false
LINCS L1000 Connectivity Map (L1000 CMAP) Signatures of Differentially Expressed Genes for Small Molecules mRNA expression profiles for cell lines following small molecule perturbation transcriptomics small molecule perturbation 14778 true
LOCATE Curated Protein Localization Annotations Subcellular localization of proteins from low-throughput or high-throughput protein localization assays proteomics cellular component 7217 false
MiRTarBase microRNA Targets Target genes of microRNAs from published experiments physical interactions microRNA 18569 false
MotifMap Predicted Transcription Factor Targets Target genes of transcription factors predicted using known transcription factor binding site motifs genomics transcription factor 26899 false
Mammalian Phenotype Ontology (MPO) Gene-Phenotype Associations Observed phenotypes of transgenic mice collected from mouse phenotyping studies disease or phenotype associations phenotype 14833 true
Molecular Signatures Database (MSigDB) Cancer Gene Co-expression Modules Computational signatures of genes co-expressed with cancer related genes transcriptomics co-expressed gene 8373 false
Molecular Signatures Database (MSigDB) Signatures of Differentially Expressed Genes for Cancer Gene Perturbations Oncogenic signatures of genes differentially expressed following cancer gene perturbations transcriptomics gene perturbation 7370 false
Nuclear Receptor Signaling Atlas (NURSA) Protein Complexes Proteins identified in complexes isolated from cultured cells proteomics protein complex 11876 false
Nuclear Receptor Signaling Atlas (NURSA) Protein-Protein Interactions Protein-protein interactions inferred from membership in complexes proteomics interacting protein 9032 false
Online Mendelian Inheritance in Man (OMIM) Gene-Disease Associations Disease- or phenotype-causing gene mutations for heritable human diseases or phenotypes curated from biomedical publications disease or phenotype associations phenotype 20478 false
PANTHER Pathways Sets of proteins participating in pathways from PANTHER structural or functional annotations pathway 10482 false
Pathway Commons (PC) Protein-Protein Interactions Protein-protein interactions from low-throughput or high-throughput studies aggregated by Pathway Commons from the following databases: Reactome, NCI Pathways, PhosphoSite, HumanCyc, HPRD, PANTHER, DIP, BioGRID, IntAct, BIND, Transfac, MiRTarBase, Drugbank, Recon X, Comparative Toxicogenomics Database, and KEGG physical interactions interacting protein 54321 false
Phosphosite Textmining Biological Term Annotations Occurrence frequencies for biological terms in abstracts of publications describing phosphosites structural or functional annotations biological term 3654 false
PhosphoSitePlus Substrates of Kinases Kinase-substrate interactions curated from low-throughput or high-throughput phosphoproteomics studies physical interactions kinase 11323 false
Pathway Interaction Database (PID) Pathways Sets of proteins participating in pathways from PID structural or functional annotations pathway 16269 false
Proteomics Database (ProteomicsDB) Cell Type and Tissue Protein Expression Profiles Protein expression profiles for tissues and cell types reprocessed from many proteomics datasets proteomics cell type or tissue 13110 false
Reactome Pathways 2014 Sets of proteins participating in pathways from Reactome structural or functional annotations pathway 12676 true
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles DNA methylation profiles for primary cell types and tissues genomics cell type or tissue 9250 false
Roadmap Epigenomics Cell and Tissue Gene Expression Profiles mRNA expression profiles for primary cell types and tissues transcriptomics cell type or tissue 6512 false
Roadmap Epigenomics Histone Modification Site Profiles Histone modification profiles for primary cells and tissues genomics histone modification site profile 7191 false
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs Phosphorylation levels of proteins in cell lines following drug treatment proteomics drug perturbation 4385 false
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Gene Perturbations Phosphorylation levels of proteins in cell lines following genetic perturbation (knockdown, knockout, over-expression, mutation) proteomics gene perturbation 2769 false
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands Phosphorylation levels of proteins in cell lines following ligand treatment proteomics ligand (protein) perturbation 3646 false
TargetScan Predicted Conserved microRNA Targets Target genes of microRNAs predicted by searching genes for sites matching conserved miRNA seed regions genomics microRNA 6895 false
The Cancer Genome Atlas (TCGA) Signatures of Differentially Expressed Genes for Tumors mRNA expression profiles for tumor and normal tissue samples transcriptomics tissue sample 18496 false
TISSUES Curated Tissue Protein Expression Evidence Scores Protein tissue expression evidence scores by manual literature curation structural or functional annotations tissue 8917 true
TISSUES Experimental Tissue Protein Expression Evidence Scores Protein tissue expression evidence scores by integrating experimental data proteomics tissue 7212 true
TISSUES Text-mining Tissue Protein Expression Evidence Scores Gene-tissue co-occurrence scores from text-mining biomedical abstracts structural or functional annotations tissue 20455 true
Virus MINT Protein-Viral Protein Interactions Interactions between viral and human proteins manually curated from literature physical interactions viral protein 6646 false
WikiPathways Pathways 2014 Sets of proteins participating in pathways from WikiPathways structural or functional annotations pathway 14214 true
Virus MINT Protein-Virus Interactions Interactions between viruses and human proteins manually curated from literature physical interactions virus 4332 false
LOCATE Predicted Protein Localization Annotations Subcellular localization of proteins by sequence similarity to localization sequences proteomics cellular component 4951 false
TargetScan Predicted Nonconserved microRNA Targets Target genes of microRNAs predicted by searching genes for sites matching nonconserved miRNA seed regions genomics microRNA 6688 false
PhosphoSitePlus Phosphosite-Disease Associations Disease-phosphosite associations curated from literature disease or phenotype associations disease 4171 false
Sanger Cancer Dependency Map (DepMap) Cancer Cell Line Proteomics Protein intensity values acquired using data-independent acquisition mass spectrometry (DIA-MS). proteomics cell line 2421 false
knockTF Gene Expression Profiles with Transcription Factor Perturtbations Gene expression profiles for cell lines or tissues following transcription factor perturbation (knockdown/knockout) transcriptomics transcription factor perturbation 2784 false
Kinase Library Serine Threonine Kinome Atlas A phosphoproteomics atlas detailing phosphorylation of protein substrates by 303 serine/threonine kinases in the human kinome. proteomics kinase 2349 false
DeepCoverMOA Drug Mechanisms of Action Protein expression profiles in HCT116 cell line following drug treatment proteomics small molecule perturbation 2413 false
Tabula Sapiens Gene-Cell Associations Gene expression data from Tabula Sapiens scRNA-seq counts transcriptomics cell type 1670 false
DisGeNET Gene-Disease Associations Gene-disease associations sourced from curated repositories, GWAS catalogues, animal models and the scientific literature disease or phenotype associations disease 6543 false
DisGeNET Gene-Phenotype Associations Gene-phenotype associations sourced from curated repositories, GWAS catalogues, animal models and the scientific literature disease or phenotype associations phenotype 3746 false
Gene Ontology (GO) Biological Process Annotations 2023 Curated annotations of genes with biological processes structural or functional annotations biological process 4524 true
Gene Ontology (GO) Cellular Component Annotations 2023 Curated annotations of genes with cellular components structural or functional annotations cellular component 2139 true
Gene Ontology (GO) Molecular Function Annotations 2023 Curated annotations of genes with molecular functions structural or functional annotations molecular function 2282 true
Pathway Figure Optical Character Recognition (PFOCR) Pathway Figure Associations 2023 Sets of genes/proteins extracted from pathway figures in research publications using optical character recognition structural or functional annotations pathway 2928 true
Cancer Cell Line Encyclopedia (CCLE) Cell Line Proteomics Protein intensity values acquired using mass spectrometry across human cancerous cell lines proteomics cell line 1611 false
Cancer Dependency Map (DepMap) CRISPR Gene Dependency Dependency scores for cell lines following single gene knockdowns disease or phenotype associations cell line 1400 false
ChIP-X Enrichment Analysis (ChEA) Transcription Factor Targets 2022 Target genes of transcription factors from published ChIP-chip, ChIP-seq, and other transcription factor binding site profiling studies genomics transcription factor 4935 false
Mammalian Phenotype Ontology (MPO) Mouse Phenotype Associations 2023 Observed phenotypes of transgenic mice collected from mouse phenotyping studies disease or phenotype associations phenotype 1632 false
LINCS L1000 Connectivity Map (L1000 CMAP) CRISPR Knockout Consensus Signatures Gene association consensus signatures following CRISPR gene knockout transcriptomics gene perturbation 3503 false
Molecular Transducers of Physical Activity Consortium (MoTrPAC) Rat Endurance Exercise Training Transcriptomics RNA-seq gene expression profiles for rat tissue samples across 4 time points and 19 tissues transcriptomics tissue sample 598 false
GlyGen Glycosylated Proteins Proteins glycosylated by saccharide ligands from glycosylation site citations proteomics glycan 949 false
International Mouse Phenotyping Consortium (IMPC) Knockout Mouse Phenotypes Observed phenotypes of mice following gene knockout disease or phenotype associations phenotype 763 false
Metabolomics Workbench (MW) Enzyme Metabolite Associations Biomolecular interactions between metabolites and proteins curated from experimental studies physical interactions metabolite 671 false
LINCS L1000 Connectivity Map (L1000 CMAP) Chemical Perturbations Consensus Signatures Gene association consensus signatures following small molecule perturbation transcriptomics small molecule perturbation 1671 false
Genotype Tissue Expression (GTEx) Tissue Gene Expression Profiles 2023 Gene expression profiles for tissues from GTEx by RNA-seq transcriptomics tissue 774 false
Genotype Tissue Expression (GTEx) Tissue-Specific Aging Signatures Tissue-specific aging signatures createed from GTEx RNA-seq gene expression profiles transcriptomics tissue sample 1285 false
The Human BioMolecular Atlas Program (HuBMAP) Azimuth Cell Type Annotations Gene-cell type annotations from integrated reference scRNA-seq gene expression profiles transcriptomics cell type 887 false
SynGO Synaptic Gene Annotations Curated annotations of genes with synaptic processes and components structural or functional annotations biological term 583 false
CellMarker Gene-Cell Type Associations Cell type markers across various tissues from human and mouse scRNA-seq transcriptomics cell type 2185 false
Kinase Library Tyrosine Kinome Atlas A phosphoproteomics atlas detailing phosphorylation of protein substrates by 93 canonical and non-canonical tyrosine kinases in the human kinome. proteomics kinase 457 false
Pathway Figure Optical Character Recognition (PFOCR) Pathway Figure Associations 2024 Sets of genes/proteins extracted from pathway figures in research publications using optical character recognition, updated for 2024 structural or functional annotations pathway 1608 false
WikiPathways Pathways 2024 Sets of proteins participating in pathways from WikiPathways updated for 2024 structural or functional annotations pathway 951 false
Reactome Pathways 2024 Sets of proteins participating in pathways from Reactome, updated for 2024 structural or functional annotations pathway 1099 false
The Human BioMolecular Atlas Program (HuBMAP) ASCT+B Annotations Anatomical structure and cell type biomarker annotations from the HuBMAP ASCT+B tables structural or functional annotations cell type 388 false
The Human BioMolecular Atlas Program (HuBMAP) ASCT+B Augmented with RNA-seq Coexpression Anatomical structure and cell type biomarker annotations from the HuBMAP ASCT+B tables, augmented with RNA-seq coexpression data from ARCHS4 structural or functional annotations cell type 131 false
Gene Ontology (GO) Biological Process Annotations 2025 curated annotations of genes with biological processes structural or functional annotations biological process 272 false
Gene Ontology (GO) Cellular Component Annotations 2025 curated annotations of genes with cellular components structural or functional annotations cellular component 255 false
Gene Ontology (GO) Molecular Function Annotations 2025 curated annotations of genes with molecular functions structural or functional annotations molecular function 119 false
DISEASES Curated Gene-Disease Assocation Evidence Scores 2025 Disease gene evidence scores by manual literature curation disease or phenotype associations disease 8839 false
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 Disease gene evidence scores by integrating experimental data (GWAS) disease or phenotype associations disease 11450 false
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 Gene-disease co-occurrence scores from text-mining biomedical abstracts disease or phenotype associations disease 36912 false
Novartis Institutes for Biomedical Research (NIBR) DRUG-seq U2OS MoA Box Drug perturbation signatures created by profiling 4343 small molecules in the U2-OS cell line with the DRUG-seq platform transcriptomics drug perturbation 75 false
Genotype Tissue Expression (GTEx) eQTL 2025 Significance values for all gene-SNP pairs testing likelihood that SNP affects gene expression genomics SNP 7559 false
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 Protein tissue expression evidence scores by manual literature curation structural or functional annotations tissue 8930 false
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 Protein tissue expression evidence scores by integrating experimental data proteomics cell type or tissue 7196 false
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 Gene-tissue co-occurrence scores from text-mining biomedical abstracts structural or functional annotations cell type or tissue 20451 false
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 Protein subcellular localization evidence scores by manual literature curation structural or functional annotations cellular component 38 false
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 Protein subcellular localization evidence scores by integrating experimental data proteomics cellular component 22 false
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 Gene-cellular compartment co-occurrence scores from text-mining biomedical abstracts structural or functional annotations cellular component 9271 false