PATHOGENS_BD2K_LINCS_DCIC_COURSERA report

Categorized using metadata field microbe_name

All reports

Gene signatures

Signatures (306) and Custom Report Builder
Title Organism Platform
1 Spleen response to acute LCMV-Armstrong and persistent LCMV-Clone13 infections: time course Mus musculus Mus musculus
2 Spleen response to acute LCMV-Armstrong and persistent LCMV-Clone13 infections: time course Mus musculus Mus musculus
3 Spleen response to acute LCMV-Armstrong and persistent LCMV-Clone13 infections: time course Mus musculus Mus musculus
4 Spleen response to acute LCMV-Armstrong and persistent LCMV-Clone13 infections: time course Mus musculus Mus musculus
5 Spleen response to acute LCMV-Armstrong and persistent LCMV-Clone13 infections: time course Mus musculus Mus musculus
6 Latent gammaherpesvirus 68 infection of various organs Mus musculus Mus musculus
7 Latent gammaherpesvirus 68 infection of various organs Mus musculus Mus musculus
8 Latent gammaherpesvirus 68 infection of various organs Mus musculus Mus musculus
9 Latent gammaherpesvirus 68 infection of various organs Mus musculus Mus musculus
10 Latent gammaherpesvirus 68 infection of various organs Mus musculus Mus musculus
11 Latent gammaherpesvirus 68 infection of various organs Mus musculus Mus musculus
12 Lung response to infection with Staphylococcus aureus Hla-deficient isogenic mutant: time course Mus musculus Mus musculus
13 Lung response to infection with Staphylococcus aureus Hla-deficient isogenic mutant: time course Mus musculus Mus musculus
14 Lung response to infection with Staphylococcus aureus Hla-deficient isogenic mutant: time course Mus musculus Mus musculus
15 Lung response to infection with Staphylococcus aureus Hla-deficient isogenic mutant: time course Mus musculus Mus musculus
16 Treatment-naive, chronic hepatitis C virus-infected patients: CD4+ and CD8+ T-lymphocytes Homo sapiens Homo sapiens
17 Treatment-naive, chronic hepatitis C virus-infected patients: CD4+ and CD8+ T-lymphocytes Homo sapiens Homo sapiens
18 Pandemic and seasonal H1N1 influenza virus infections of bronchial epithelial cells in vitro Homo sapiens Homo sapiens
19 Pandemic and seasonal H1N1 influenza virus infections of bronchial epithelial cells in vitro Homo sapiens Homo sapiens
20 Pandemic and seasonal H1N1 influenza virus infections of bronchial epithelial cells in vitro Homo sapiens Homo sapiens
21 Human polyomavirus JC virus (JCV) infection of clonal immortalized glial SVG cells Homo sapiens Homo sapiens
22 Human polyomavirus JC virus (JCV) infection of clonal immortalized glial SVG cells Homo sapiens Homo sapiens
23 SARM-deficient brain response to vesicular stomatitis virus infection Mus musculus Mus musculus
24 SARM-deficient brain response to vesicular stomatitis virus infection Mus musculus Mus musculus
25 Peripheral blood mononuclear cells response to Lassa Virus and Mopeia/Lassa reassortant 29: time course Homo sapiens Homo sapiens
26 Peripheral blood mononuclear cells response to Lassa Virus and Mopeia/Lassa reassortant 29: time course Homo sapiens Homo sapiens
27 Peripheral blood mononuclear cells response to Lassa Virus and Mopeia/Lassa reassortant 29: time course Homo sapiens Homo sapiens
28 Human herpesvirus-8 infection of primary pulmonary microvascular cells Homo sapiens Homo sapiens
29 Peripheral blood mononuclear cells response to Lassa Virus and Mopeia/Lassa reassortant 29: time course Homo sapiens Homo sapiens
30 Peripheral blood mononuclear cells response to Lassa Virus and Mopeia/Lassa reassortant 29: time course Homo sapiens Homo sapiens
31 Peripheral blood mononuclear cells response to Lassa Virus and Mopeia/Lassa reassortant 29: time course Homo sapiens Homo sapiens
32 Bronchial epithelial cell line response to various airway pathogens Homo sapiens Homo sapiens
33 Bronchial epithelial cell line response to various airway pathogens Homo sapiens Homo sapiens
34 Bronchial epithelial cell line response to various airway pathogens Homo sapiens Homo sapiens
35 Two types of HIV-associated neurocognitive impairment: brain regions Homo sapiens Homo sapiens
36 Two types of HIV-associated neurocognitive impairment: brain regions Homo sapiens Homo sapiens
37 Two types of HIV-associated neurocognitive impairment: brain regions Homo sapiens Homo sapiens
38 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
39 Encapsulated Streptococcus pneumoniae strains effect on pharyngeal epithelial cell line Homo sapiens Homo sapiens
40 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
41 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
42 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
43 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
44 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
45 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
46 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
47 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
48 Lung immune response to Nippostrongylus brasiliensis infection: time course Mus musculus Mus musculus
49 Dendritic cell response to Leishmania major infection: time course Homo sapiens Homo sapiens
50 Encapsulated Streptococcus pneumoniae strains effect on pharyngeal epithelial cell line Homo sapiens Homo sapiens
51 Dendritic cell response to Leishmania major infection: time course Homo sapiens Homo sapiens
52 Dendritic cell response to Leishmania major infection: time course Homo sapiens Homo sapiens
53 Dendritic cell response to Leishmania major infection: time course Homo sapiens Homo sapiens
54 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
55 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
56 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
57 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
58 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
59 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
60 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
61 Encapsulated Streptococcus pneumoniae strains effect on pharyngeal epithelial cell line Homo sapiens Homo sapiens
62 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
63 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
64 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
65 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
66 Rough attenuated Brucella suis strain infection effect on macrophage cell line: time course Mus musculus Mus musculus
67 Chlamydia pneumonia infection effect on dendritic cells Homo sapiens Homo sapiens
68 Small intestine response to Aeromonas caviae infection Mus musculus Mus musculus
69 Macrophage cell line response to Chlamydia pneumoniae infection Mus musculus Mus musculus
70 Rift Valley Fever virus ZH548 infection effect on BALB/cByJ and MBT/Pas embryonic fibroblasts Mus musculus Mus musculus
71 Rift Valley Fever virus ZH548 infection effect on BALB/cByJ and MBT/Pas embryonic fibroblasts Mus musculus Mus musculus
72 Encapsulated Streptococcus pneumoniae strains effect on pharyngeal epithelial cell line Homo sapiens Homo sapiens
73 Head and neck squamous cell carcinoma tumors harboring human papillomavirus Homo sapiens Homo sapiens
74 HIV-1 burden effect on mononuclear cell response to co-infection with Neisseria gonorrhoeae Homo sapiens Homo sapiens
75 HIV-1 burden effect on mononuclear cell response to co-infection with Neisseria gonorrhoeae Homo sapiens Homo sapiens
76 Severe pandemic H1N1 influenza effect on peripheral blood: time course Homo sapiens Homo sapiens
77 Severe pandemic H1N1 influenza effect on peripheral blood: time course Homo sapiens Homo sapiens
78 Shiga toxin type 1 effect on myelogenous leukemia cell line THP-1 Homo sapiens Homo sapiens
79 West Nile virus infection effect on retinal pigment epithelium cells Homo sapiens Homo sapiens
80 Norovirus infection effect on macrophage cell line Mus musculus Mus musculus
81 Airway epithelial cells response to Sendai virus infection in vitro Mus musculus Mus musculus
82 Bronchial epithelial cell response to respiratory syncytial virus infection: time course Homo sapiens Homo sapiens
83 Encapsulated Streptococcus pneumoniae strains effect on pharyngeal epithelial cell line Homo sapiens Homo sapiens
84 Bronchial epithelial cell response to respiratory syncytial virus infection: time course Homo sapiens Homo sapiens
85 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
86 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
87 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
88 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
89 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
90 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
91 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
92 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
93 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
94 Encapsulated Streptococcus pneumoniae strains effect on pharyngeal epithelial cell line Homo sapiens Homo sapiens
95 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
96 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
97 Effect of gonadal steroids on sex differences in response to blood-stage malaria infection: time course Mus musculus Mus musculus
98 Cerebral malaria model: time course Mus musculus Mus musculus
99 Cerebral malaria model: time course Mus musculus Mus musculus
100 Cerebral malaria model: time course Mus musculus Mus musculus
101 Cerebral malaria model: time course Mus musculus Mus musculus
102 Cerebral malaria model: time course Mus musculus Mus musculus
103 Cerebral malaria model: time course Mus musculus Mus musculus
104 Probiotic effect on inflamed colonic explants Homo sapiens Homo sapiens
105 Encapsulated Streptococcus pneumoniae strains effect on pharyngeal epithelial cell line Homo sapiens Homo sapiens
106 Probiotic effect on inflamed colonic explants Homo sapiens Homo sapiens
107 Probiotic effect on inflamed colonic explants Homo sapiens Homo sapiens
108 Lung epithelium response to fungal allergen Alternaria Mus musculus Mus musculus
109 Cryptosporidium infection effect on intestinal epithelial cells in vitro Homo sapiens Homo sapiens
110 Cryptosporidium infection effect on intestinal epithelial cells in vitro Homo sapiens Homo sapiens
111 Peripheral blood monocyte response to Francisella tularensis infections Homo sapiens Homo sapiens
112 Peripheral blood monocyte response to Francisella tularensis infections Homo sapiens Homo sapiens
113 Macrophage cell line response to Toxoplasma gondii infection Mus musculus Mus musculus
114 Foreskin fibroblast response to Toxoplasma gondii RH type 1 (ROP5) mutant infection Homo sapiens Homo sapiens
115 Foreskin fibroblast response to Toxoplasma gondii RH type 1 (ROP5) mutant infection Homo sapiens Homo sapiens
116 Bifidobacterium bifidum and Lactobacillus acidophilus co-stimulation effect on bone-marrow derived dendritic cells Mus musculus Mus musculus
117 CD34+derived erythoblast co-culture with Plasmodium falciparum 3D7 (Dchip analysis) Homo sapiens Homo sapiens
118 CD34+derived erythoblast co-culture with Plasmodium falciparum 3D7 (Dchip analysis) Homo sapiens Homo sapiens
119 CD34+derived erythoblast co-culture with Plasmodium falciparum 3D7 (GenePattern analysis) Homo sapiens Homo sapiens
120 CD34+derived erythoblast co-culture with Plasmodium falciparum 3D7 (GenePattern analysis) Homo sapiens Homo sapiens
121 Bronchial epithelial cell response to rhinovirus infection and cigarette smoke exposure Homo sapiens Homo sapiens
122 Splenocyte response to infection by virB mutant Brucella strains Mus musculus Mus musculus
123 Splenocyte response to infection by virB mutant Brucella strains Mus musculus Mus musculus
124 Splenocyte response to infection by virB mutant Brucella strains Mus musculus Mus musculus
125 Splenocyte response to infection by virB mutant Brucella strains Mus musculus Mus musculus
126 Promyelocytic cell response to Anaplasma phagocytophilum infection Homo sapiens Homo sapiens
127 Pandemic and seasonal influenza A H1N1 infection of differentiated type I-like alveolar epithelial cells in vitro Homo sapiens Homo sapiens
128 Antiretroviral therapy effect on brain of patients with HIV-associated neurocognitive disorders Homo sapiens Homo sapiens
129 HIV-1 infection effect on peripheral blood mononuclear cells Homo sapiens Homo sapiens
130 Pyrazinamide effect on pulmonary tuberculosis model : time course Mus musculus Mus musculus
131 Active tuberculosis: peripheral blood mononuclear cells Homo sapiens Homo sapiens
132 Mycobacterium tuberculosis H37Rv-infected macrophages response to vitamin D Homo sapiens Homo sapiens
133 Comparative analysis of monocytes from healthy donors, patients with metastatic breast cancer, sepsis or tuberculosis. Homo sapiens Homo sapiens
134 Hepatitis B virus (HBV)-associated acute liver failure (ALF) patients: liver explant Homo sapiens Homo sapiens
135 Gene expression comparison between Mycobacterium tuberculosis infected monocytes from tuberculous and healthy elders Homo sapiens Homo sapiens
136 PBMCs exposed to the Mycobacterium tuberculosis H37Ra strain Homo sapiens Homo sapiens
137 Human whole blood microarray study to compare patients with tuberculosis, sarcoidosis, pneumonia, and lung cancer (test) Homo sapiens Homo sapiens
138 Human whole blood microarray study to compare patients with tuberculosis, sarcoidosis, pneumonia, and lung cancer (validation) Homo sapiens Homo sapiens
139 Hepatitis B surface antigen effect on hepatoma cell line Homo sapiens Homo sapiens
140 Transforming growth factor-β effect on fibroblasts in the presence of Trypanosoma cruzi conditioned medium Homo sapiens Homo sapiens
141 Expression data from hearts of wild-type C57BL/6 mice infected with T. cruzi and controls (uninfected) Mus musculus Mus musculus
142 Expression data from human primary fibroblasts, endothelial and smooth muscle cells infected with Trypanosoma cruzi Homo sapiens Homo sapiens
143 Expression data from human primary fibroblasts, endothelial and smooth muscle cells infected with Trypanosoma cruzi Homo sapiens Homo sapiens
144 Expression data from human primary fibroblasts, endothelial and smooth muscle cells infected with Trypanosoma cruzi Homo sapiens Homo sapiens
145 Expression data from human primary fibroblasts, endothelial and smooth muscle cells infected with Trypanosoma cruzi Homo sapiens Homo sapiens
146 Transcriptional response in skin of mouse 24 hours after intradermal infection with Trypanosoma cruzi Mus musculus Mus musculus
147 Transcriptome profile of Trypanosoma cruzi-infected cells Trypanosoma cruzi; Homo sapiens Trypanosoma cruzi; Homo sapiens
148 Transcriptional response in skin of mouse 24 hours after intradermal infection with Trypanosoma cruzi Mus musculus Mus musculus
149 Treatment-naive, chronic hepatitis C virus-infected patients: CD4+ and CD8+ T-lymphocytes Homo sapiens Homo sapiens
150 Transcriptional response in skin of mouse 24 hours after intradermal infection with Trypanosoma cruzi Mus musculus Mus musculus
151 Transcriptional response in skin of mouse 24 hours after intradermal infection with Trypanosoma cruzi Mus musculus Mus musculus
152 Transcriptional response in skin of mouse 24 hours after intradermal infection with Trypanosoma cruzi Mus musculus Mus musculus
153 Leishmania major modulates autophagy in host macrophages during intracellular differentiation Mus musculus Mus musculus
154 Transcriptional response in skin of mouse 24 hours after intradermal infection with Trypanosoma cruzi Mus musculus Mus musculus
155 Leishmania major modulates autophagy in host macrophages during intracellular differentiation Mus musculus Mus musculus
156 Genomic profiling of human Leishmania braziliensis lesions identifies transcriptional modules associated with cutaneous immunopathology Homo sapiens Homo sapiens
157 Genomic profiling of human Leishmania braziliensis lesions identifies transcriptional modules associated with cutaneous immunopathology Homo sapiens Homo sapiens
158 CD8 T cells induce perforin-dependent pathology in Leishmania braziliensis infection Homo sapiens Homo sapiens
159 Whole genome microarray analysis of mouse liver subjected to Leishmania donovani infection Mus musculus Mus musculus
160 Distinct Transcriptional Signatures of Bone Marrow-Derived C57BL/6 and DBA/2 Dendritic Leucocytes Hosting Live Leishmania amazonensis Amastigotes Mus musculus Mus musculus
161 Distinct Transcriptional Signatures of Bone Marrow-Derived C57BL/6 and DBA/2 Dendritic Leucocytes Hosting Live Leishmania amazonensis Amastigotes Mus musculus Mus musculus
162 Transcript abundance comparison between uninfected DCs and DCs housing L. amazonensis Mus musculus Mus musculus
163 Signal transduction adaptor MyD88 deficient lung response to Chlamydia pneumoniae infection Mus musculus Mus musculus
164 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
165 Human enteroendcrine cell responses to infection with Chlamydia trachomatis Homo sapiens Homo sapiens
166 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
167 Expression data of A2EN cells during early stage of Chlamydia trachomatis infection Homo sapiens Homo sapiens
168 Human enteroendcrine cell responses to infection with Chlamydia trachomatis Homo sapiens Homo sapiens
169 Expression data of A2EN cells during early stage of Chlamydia trachomatis infection Homo sapiens Homo sapiens
170 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
171 Transcriptome profiling of endometrial biopsies inflammatory response to Chlamydia trachomatis genital tract infection Homo sapiens Homo sapiens
172 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
173 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
174 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
175 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
176 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
177 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
178 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
179 Treatment-naive, chronic hepatitis C virus-infected patients: CD4+ and CD8+ T-lymphocytes Homo sapiens Homo sapiens
180 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
181 Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type Homo sapiens Homo sapiens
182 Immature dendritic cell response to Aspergillus fumigatus infection in vitro Homo sapiens Homo sapiens
183 Genome-wide analysis of blood, spleen and lung expression of C57BL/6 mice subjected to Burkholderia pseudomallei infection Mus musculus Mus musculus
184 Genome-wide analysis of blood, spleen and lung expression of C57BL/6 mice subjected to Burkholderia pseudomallei infection Mus musculus Mus musculus
185 Genome-wide analysis of blood, spleen and lung expression of C57BL/6 mice subjected to Burkholderia pseudomallei infection Mus musculus Mus musculus
186 Genome-wide analysis of blood, spleen and lung expression of C57BL/6 mice subjected to Burkholderia pseudomallei infection Mus musculus Mus musculus
187 Genome-wide analysis of blood, spleen and lung expression of C57BL/6 mice subjected to Burkholderia pseudomallei infection Mus musculus Mus musculus
188 Genome-wide analysis of blood, spleen and lung expression of C57BL/6 mice subjected to Burkholderia pseudomallei infection Mus musculus Mus musculus
189 Multifaceted maturation of monocyte-derived dendritic cells stimulated by intracellular bacteria Homo sapiens Homo sapiens
190 IFN-gamma and host genetic background effect on Yersinia enterocolitica infected macrophages Mus musculus Mus musculus
191 Multifaceted maturation of monocyte-derived dendritic cells stimulated by intracellular bacteria Homo sapiens Homo sapiens
192 Transcriptional analysis of cervical epithelial cell responses to HIV-1 Homo sapiens Homo sapiens
193 Multifaceted maturation of monocyte-derived dendritic cells stimulated by intracellular bacteria Homo sapiens Homo sapiens
194 Cytosolic Phospholipase A2α and Eicosanoids Regulate Expression of Genes in Macrophages Involved in Host Defense and Inflammation Mus musculus Mus musculus
195 Multifaceted maturation of monocyte-derived dendritic cells stimulated by intracellular bacteria Homo sapiens Homo sapiens
196 Cytosolic Phospholipase A2α and Eicosanoids Regulate Expression of Genes in Macrophages Involved in Host Defense and Inflammation Mus musculus Mus musculus
197 Genome-wide transcriptional analysis of flagellin induced reprogramming in mouse corneal epithelial cells in response to Pseudomonas aeruginosa Mus musculus Mus musculus
198 Interferon receptor deficient lymph node B cell response to influenza infection Mus musculus Mus musculus
199 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
200 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
201 IFN-gamma and host genetic background effect on Yersinia enterocolitica infected macrophages Mus musculus Mus musculus
202 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
203 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
204 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
205 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
206 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
207 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
208 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
209 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
210 Ten day time course of the effect of influenza A infection on peripheral blood monocyte gene expression in mice Mus musculus Mus musculus
211 Macrophage response to viral infection Mus musculus Mus musculus
212 IFN-gamma and host genetic background effect on Yersinia enterocolitica infected macrophages Mus musculus Mus musculus
213 Ten day time course of the effect of influenza A infection on lung gene expression in mice Mus musculus Mus musculus
214 Ten day time course of the effect of influenza A infection on lung gene expression in mice Mus musculus Mus musculus
215 Ten day time course of the effect of influenza A infection on lung gene expression in mice Mus musculus Mus musculus
216 Ten day time course of the effect of influenza A infection on lung gene expression in mice Mus musculus Mus musculus
217 Ten day time course of the effect of influenza A infection on lung gene expression in mice Mus musculus Mus musculus
218 Ten day time course of the effect of influenza A infection on lung gene expression in mice Mus musculus Mus musculus
219 Ten day time course of the effect of influenza A infection on lung gene expression in mice Mus musculus Mus musculus
220 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
221 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
222 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
223 IFN-gamma and host genetic background effect on Yersinia enterocolitica infected macrophages Mus musculus Mus musculus
224 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
225 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
226 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
227 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
228 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
229 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
230 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
231 Ten day time course of the effect of influenza A infection on spleen gene expression in mice Mus musculus Mus musculus
232 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
233 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
234 IFN-gamma and host genetic background effect on Yersinia enterocolitica infected macrophages Mus musculus Mus musculus
235 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
236 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
237 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
238 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
239 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
240 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
241 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
242 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
243 Ten day time course of the effect of influenza A infection on mediastinal lymph node gene expression in mice Mus musculus Mus musculus
244 IFN-gamma and host genetic background effect on Yersinia enterocolitica infected macrophages Mus musculus Mus musculus
245 Host bladder urothelial response to intracellular bacterial communities Mus musculus Mus musculus
246 Host bladder urothelial response to intracellular bacterial communities Mus musculus Mus musculus
247 Placental malaria Homo sapiens Homo sapiens
248 Placental malaria Homo sapiens Homo sapiens
249 Placental malaria Homo sapiens Homo sapiens
250 Placental malaria Homo sapiens Homo sapiens
251 Sex effect on chronic coxsackievirus B3-induced myocarditis: heart Mus musculus Mus musculus
252 Sex effect on chronic coxsackievirus B3-induced myocarditis: heart Mus musculus Mus musculus
253 Microarray studies on effect of Pneumocystis carinii infection on global gene expression in alveolar macrophages Rattus norvegicus Rattus norvegicus
254 IFN-gamma and host genetic background effect on Yersinia enterocolitica infected macrophages Mus musculus Mus musculus
255 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
256 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
257 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
258 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
259 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
260 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
261 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
262 Newborn intestinal tissues response to Shigella flexineri infection Mus musculus Mus musculus
263 Severe influenza A infection: whole blood Homo sapiens Homo sapiens
264 Severe influenza A infection: whole blood Homo sapiens Homo sapiens
265 Severe influenza A infection: whole blood Homo sapiens Homo sapiens
266 Severe influenza A infection: whole blood Homo sapiens Homo sapiens
267 Severe influenza A infection: whole blood Homo sapiens Homo sapiens
268 Matrix metalloproteinase mutant airway epithelial cells response to Pseudomonas aeruginosa infection: time course Mus musculus Mus musculus
269 Matrix metalloproteinase mutant airway epithelial cells response to Pseudomonas aeruginosa infection: time course Mus musculus Mus musculus
270 Matrix metalloproteinase mutant airway epithelial cells response to Pseudomonas aeruginosa infection: time course Mus musculus Mus musculus
271 Matrix metalloproteinase mutant airway epithelial cells response to Pseudomonas aeruginosa infection: time course Mus musculus Mus musculus
272 Matrix metalloproteinase mutant airway epithelial cells response to Pseudomonas aeruginosa infection: time course Mus musculus Mus musculus
273 Matrix metalloproteinase mutant airway epithelial cells response to Pseudomonas aeruginosa infection: time course Mus musculus Mus musculus
274 Macrophage response to to Staphylococcus aureus infection in vitro: time course Homo sapiens Homo sapiens
275 Macrophage response to to Staphylococcus aureus infection in vitro: time course Homo sapiens Homo sapiens
276 Macrophage response to to Staphylococcus aureus infection in vitro: time course Homo sapiens Homo sapiens
277 Early lung immune response in tuberculosis: time course Mus musculus Mus musculus
278 Early lung immune response in tuberculosis: time course Mus musculus Mus musculus
279 Early lung immune response in tuberculosis: time course Mus musculus Mus musculus
280 Clock mutant cecum response to Salmonella enterica serovar Typhimurium infection at different circadian times Mus musculus Mus musculus
281 Clock mutant cecum response to Salmonella enterica serovar Typhimurium infection at different circadian times Mus musculus Mus musculus
282 Clock mutant cecum response to Salmonella enterica serovar Typhimurium infection at different circadian times Mus musculus Mus musculus
283 Clock mutant cecum response to Salmonella enterica serovar Typhimurium infection at different circadian times Mus musculus Mus musculus
284 Probiotic Lactobacillus GG soluble factors effect on intestinal epithelial cells Mus musculus Mus musculus
285 Helicobacter pylori infection effect on a gastric epithelial progenitor cell line Mus musculus Mus musculus
286 Helicobacter pylori infection effect on a gastric epithelial progenitor cell line Mus musculus Mus musculus
287 Helicobacter pylori infection effect on a gastric epithelial progenitor cell line Mus musculus Mus musculus
288 Helicobacter pylori infection effect on a gastric epithelial progenitor cell line Mus musculus Mus musculus
289 Host bladder urothelial response to intracellular bacterial communities Mus musculus Mus musculus
290 Host bladder urothelial response to intracellular bacterial communities Mus musculus Mus musculus
291 Macrophages from tuberculosis infected subjects response to M. tuberculosis cell lysate ex vivo Homo sapiens Homo sapiens
292 Macrophages from tuberculosis infected subjects response to M. tuberculosis cell lysate ex vivo Homo sapiens Homo sapiens
293 Hepatitis C Virus infection effect on Huh7 hepatoma cells: time course Homo sapiens Homo sapiens
294 Macrophages from tuberculosis infected subjects response to M. tuberculosis cell lysate ex vivo Homo sapiens Homo sapiens
295 HMEC-1 endothelial cell line response to infection by Rickettsia prowazekii Homo sapiens Homo sapiens
296 HMEC-1 endothelial cell line response to infection by Rickettsia prowazekii Homo sapiens Homo sapiens
297 HMEC-1 endothelial cell line response to infection by Rickettsia prowazekii Homo sapiens Homo sapiens
298 Intestinal lymphoid tissues infected with Yersinia enterocolitica: time course Mus musculus Mus musculus
299 Intestinal lymphoid tissues infected with Yersinia enterocolitica: time course Mus musculus Mus musculus
300 Intestinal lymphoid tissues infected with Yersinia enterocolitica: time course Mus musculus Mus musculus
301 Intestinal lymphoid tissues infected with Yersinia enterocolitica: time course Mus musculus Mus musculus
302 Macrophage response to H1N1 and H5N1 influenza viral infections Homo sapiens Homo sapiens
303 Macrophage response to H1N1 and H5N1 influenza viral infections Homo sapiens Homo sapiens
304 Macrophage response to H1N1 and H5N1 influenza viral infections Homo sapiens Homo sapiens
305 Macrophage response to H1N1 and H5N1 influenza viral infections Homo sapiens Homo sapiens
306 Macrophage response to H1N1 and H5N1 influenza viral infections Homo sapiens Homo sapiens

PCA

Interactive 3D principal component analysis of gene signatures. You can rotate the visualization and mouse over the data points.

Genes

Hierarchical clustering of genes based on weights from the differential expression method.

Enrichr

Enrichr is a web tool that performs gene set enrichment analysis. To generate the hierarchical clusterings below, GEN3VA enriched each gene signature using Enrichr and then clustered the terms. Use the select button to change Enrichr's background library.

Hierarchical clustering of enriched terms from

L1000CDS2

L1000CDS2 is a web tool that queries the LINCS L1000 dataset to identify small molecules that can reverse or mimic the observed input expression pattern. To generate the hierarchical clustering below, GEN3VA enriched each gene signature using L1000CDS2 to generate a list of perturbations that either mimic (red) and reverse (blue) expression.