Name

ChEA Transcription Factor Targets Dataset

From ChIP-X Enrichment Analysis

Target genes of transcription factors from published ChIP-chip, ChIP-seq, and other transcription factor binding site profiling studies

DrugBank Drug Targets Dataset

From DrugBank

Sets of proteins targeted by drugs by manual literature curation

ENCODE Transcription Factor Targets Dataset

From Encyclopedia of DNA Elements

Target genes of transcription factors from transcription factor binding site profiles

JASPAR Predicted Transcription Factor Targets Dataset (Archived)

From Jaspar PWMs

Target genes of transcription factors predicted using known transcription factor binding site motifs

LINCS KinomeScan Kinase Inhibitor Targets Dataset

From LINCS KinomeScan

Kinase inhibitor targets from percent inhibition of kinases by small molecules measured using purified kinases

MiRTarBase microRNA Targets Dataset

From MiRTarBase

Target genes of microRNAs from published experiments

MotifMap Predicted Transcription Factor Targets Dataset

From MotifMap

Target genes of transcription factors predicted using known transcription factor binding site motifs

TargetScan Predicted Conserved microRNA Targets Dataset

From TargetScan

Target genes of microRNAs predicted by searching genes for sites matching conserved miRNA seed regions

TargetScan Predicted Nonconserved microRNA Targets Dataset

From TargetScan

Target genes of microRNAs predicted by searching genes for sites matching nonconserved miRNA seed regions

ChEA Transcription Factor Targets 2022 Dataset

From ChIP-X Enrichment Analysis

Target genes of transcription factors from published ChIP-chip, ChIP-seq, and other transcription factor binding site profiling studies

JASPAR Predicted Human Transcription Factor Targets 2025 Dataset

From Jaspar PWMs

Target genes of human transcription factors predicted using known transcription factor binding site motifs

JASPAR Predicted Mouse Transcription Factor Targets 2025 Dataset

From Jaspar PWMs

Target genes of mouse transcription factors predicted using known transcription factor binding site motifs

DGIdb Drug Targets 2026 Dataset

From Drug-Gene Interaction Database

Sets of proteins targeted by drugs by data aggregation