| Name |
|---|
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles DatasetFrom Roadmap Epigenomics DNA methylation profiles for primary cell types and tissues |
Pathway Commons Protein-Protein Interactions DatasetFrom Pathway Commons Protein-protein interactions from low-throughput or high-throughput studies aggregated by Pathway Commons from the following databases: Reactome, NCI Pathways, PhosphoSite, HumanCyc, HPRD, PANTHER, DIP, BioGRID, IntAct, BIND, Transfac, MiRTarBase, Drugbank, Recon X, Comparative Toxicogenomics Database, and KEGG |
PFOCR Pathway Figure Associations 2023 Dataset (Archived)From Pathway Figure Optical Character Recognition Sets of genes/proteins extracted from pathway figures in research publications using optical character recognition |
PFOCR Pathway Figure Associations 2024 DatasetFrom Pathway Figure Optical Character Recognition Sets of genes/proteins extracted from pathway figures in research publications using optical character recognition, updated for 2024 |
ENCODE Histone Modification Site Profiles DatasetFrom Encyclopedia of DNA Elements Histone site modification profiles for cell lines from ENCODE |
ENCODE Transcription Factor Binding Site Profiles DatasetFrom Encyclopedia of DNA Elements Transcription factor binding site profiles for cell lines |
ENCODE Transcription Factor Targets DatasetFrom Encyclopedia of DNA Elements Target genes of transcription factors from transcription factor binding site profiles |
PID Pathways DatasetFrom Pathway Interaction Database Sets of proteins participating in pathways from PID |