Harmonizome 3.0

From GeneRIF Biological Term Annotations

genes co-occuring with the biological term stimulated in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

From CORUM Protein Complexes

proteins in the CIN85-CBL-SH3GL2-EGFR complex, EGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Raf1-PP2A holoenzyme complex (Ppp2r1a, Ppp2r2b, Ppp2ca), PDGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the PLC-gamma-1-Lab-Blnk complex, BCR stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the PKC-alpha-PLD1-PLC-gamma-2 signaling complex, lacritin stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the SLP-76-PLC-gamma-1-ITK complex, alpha-TCR stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Ksr1 complex (Ksr1, Mek, 14-3-3, Mapk), EGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Multicomponent signaling complex, anti-CD40 stimulated,(Birc2, Birc3, Cd40, Ikbkg, Map3k1, Traf2, Ube2n) protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the FOXO3-PCAF complex, oxidative stress stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the ITK-SLP-76 complex, anti-TCR stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Frs2-Shp2 complex, FGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Shp2-Sos complex, FGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the PLC-gamma-2-Lab-Blnk complex, BCR stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Traf6-p62-aPKC complex, RANK-L stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Cbl-SLP-76-Grb2 complex, Fc receptor gamma-R1 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the p21(ras)GAP-Fyn-Lyn-Yes complex, thrombin stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Frs2-Grb2-Shp2 complex, FGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the PLC-gamma-1-LAT-c-CBL complex, OKT3 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Multicomponent signaling complex, anti-CD40 stimulated (Birc2, Birc3, Cd40, Ikbkg, Map2k4, Map2k7, Map3k1, Traf2, Ube2n) protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Cytosolic multicomponent signaling complex, anti-CD40 stimulated, (Ikbkg, Map3k1, Traf2, Ube2n) protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Shc-Grb2-mSos1 complex, EGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Ship-Shc complex, IL-3 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the GRB2-SHP-2 complex, PDGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Il3rb1-Shc-Ship complex, IL-3 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the SLP-76-PLC-gamma-1-VAV complex, alpha-TCR stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Death-inducing signaling complex DISC (type I cells associated), stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the PDGFRA-PLC-gamma-1-PI3K-SHP-2 complex, PDGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Interferon-stimulated gene factor 3 transcription complex ISGF3 protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Ksr1-PP2A holoenzyme complex (Ppp2r1a, Ppp2r2b, Ppp2ca), PDGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Egfr-Grb2-mSos1 complex, EGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the MET-CIN85-SH3GL3-CBL complex, HGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the FOXO3-SIRT1 complex, oxidative stress stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Lab-Grb2 complex, BCR stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the BRAF-CNK1 complex, not RAS stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Grb2-Lab-Blnk complex, BCR stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the SLP-76-Cbl-Grb2-Shc complex, Fc receptor gamma-R1 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Shc-Ship-Grb2 complex, IL-3 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the PDGFRA-SHP-2 complex, PDGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Il3rb1-Shc complex, IL-3 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the RIN1-STAM2-EGFR complex, EGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Grb2-Shp2 complex, FGF stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Grb2-Sos complex, Fc receptor gamma-R1 stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the Membrane-associated multicomponent signaling complex, anti-CD40 stimulated (Cd40, Ikbkg, Map3k1, Traf2, Ube2n) protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the RAF1-BRAF complex, RAS stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the CBP-RARA-RXRA-DNA complex, ligand stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the FOXO3-TP53 complex, oxidative stress stimulated protein complex from the CORUM Protein Complexes dataset.

From CORUM Protein Complexes

proteins in the RAF1-CNK1 complex, RAS stimulated protein complex from the CORUM Protein Complexes dataset.

From GAD Gene-Disease Associations

genes associated with the disease glucose-stimulated beta cell function in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

From GO Molecular Function Annotations 2015

genes performing the cgmp-stimulated cyclic-nucleotide phosphodiesterase activity molecular function from the curated GO Molecular Function Annotations 2015 dataset.

From InterPro Predicted Protein Domain Annotations

proteins predicted to have the Cellular repressor of E1A-stimulated genes (CREG) protein domain from the InterPro Predicted Protein Domain Annotations dataset.

From InterPro Predicted Protein Domain Annotations

proteins predicted to have the Vasodilator-stimulated phosphoprotein protein domain from the InterPro Predicted Protein Domain Annotations dataset.

From InterPro Predicted Protein Domain Annotations

proteins predicted to have the Stimulated by retinoic acid gene 6 protein protein domain from the InterPro Predicted Protein Domain Annotations dataset.

From Reactome Pathways 2014

proteins participating in the YAP1- and WWTR1 (TAZ)-stimulated gene expression pathway from the Reactome Pathways dataset.

From Reactome Pathways 2014

proteins participating in the Antiviral mechanism by IFN-stimulated genes pathway from the Reactome Pathways dataset.

From Roadmap Epigenomics Histone Modification Site Profiles

genes with high histone modification abundance in the H3K4me1_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells histone modification site profile from the Roadmap Epigenomics Histone Modification Site Profiles dataset.

From Roadmap Epigenomics Histone Modification Site Profiles

genes with high histone modification abundance in the H3K27ac_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells histone modification site profile from the Roadmap Epigenomics Histone Modification Site Profiles dataset.

From Roadmap Epigenomics Histone Modification Site Profiles

genes with high histone modification abundance in the H3K36me3_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells histone modification site profile from the Roadmap Epigenomics Histone Modification Site Profiles dataset.

From Roadmap Epigenomics Histone Modification Site Profiles

genes with high histone modification abundance in the H3K4me3_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells histone modification site profile from the Roadmap Epigenomics Histone Modification Site Profiles dataset.

From Roadmap Epigenomics Histone Modification Site Profiles

genes with high histone modification abundance in the H3K9me3_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells histone modification site profile from the Roadmap Epigenomics Histone Modification Site Profiles dataset.

From GO Molecular Function Annotations 2023

genes performing the cGMP-stimulated cyclic-nucleotide phosphodiesterase activity molecular function from the curated GO Molecular Function Annotations 2023 dataset.

From CellMarker Gene-Cell Type Associations

genes associated with the CD3/CD28-stimulated T cell_Blood_Human cell type from the CellMarker Gene-Cell Type Associations dataset.

From CellMarker Gene-Cell Type Associations

genes associated with the CD3/CD28-stimulated NK cell_Blood_Human cell type from the CellMarker Gene-Cell Type Associations dataset.

From Reactome Pathways 2024

proteins participating in the Antiviral mechanism by IFN-stimulated genes pathway from the Reactome Pathways 2024 dataset.

From Reactome Pathways 2024

proteins participating in the Estrogen-stimulated signaling through PRKCZ pathway from the Reactome Pathways 2024 dataset.

From Reactome Pathways 2024

proteins participating in the NGF-stimulated transcription pathway from the Reactome Pathways 2024 dataset.

From Reactome Pathways 2024

proteins participating in the Nuclear events stimulated by ALK signaling in cancer pathway from the Reactome Pathways 2024 dataset.

From Reactome Pathways 2024

proteins participating in the YAP1- and WWTR1 (TAZ)-stimulated gene expression pathway from the Reactome Pathways 2024 dataset.

From GO Molecular Function Annotations 2025

genes performing the 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity molecular function from the curated GO Molecular Function Annotations 2025 dataset.

From CM4AI U2OS Cell Map Protein Localization Assemblies

proteins comprising Interferon-stimulated gene factor 3 (ISGF3) complex assembly using integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset.

From GWAS Catalog SNP-Phenotype Associations 2025

genes associated with the Cytokine-stimulated IL-6 production phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.

From GWAS Catalog SNP-Phenotype Associations 2025

genes associated with the Cytokine and corticosteroid-stimulated IL-6 production phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.

From GWAS Catalog SNP-Phenotype Associations 2025

genes associated with the Stimulated C-peptide levels in type I diabetes phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.

From GWAS Catalog SNP-Phenotype Associations 2025

genes associated with the Cholesterol efflux capacity (cAMP stimulated assay) phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.