Harmonizome 3.0

From Hub ong>Proteinong>s

Sets of ong>proteinong>s interacting with hub ong>proteinong>s aggregated from data

From Nuclear Receptor Signaling Atlas

ong>Proteinong>-ong>proteinong> interactions inferred from membership in complexes

From Pathway Commons

ong>Proteinong>-ong>proteinong> interactions from low-throughput or high-throughput studies aggregated by Pathway Commons from the following databases: Reactome, NCI Pathways, PhosphoSite, HumanCyc, HPRD, PANTHER, DIP, BioGRID, IntAct, BIND, Transfac, MiRTarBase, Drugbank, Recon X, Comparative Toxicogenomics Database, and KEGG

From Virus MINT

Interactions between viral and human ong>proteinong>s manually curated from literature

From COMPARTMENTS

ong>Proteinong> subcellular localization evidence scores by manual literature curation

From COMPARTMENTS

ong>Proteinong> subcellular localization evidence scores by integrating experimental data

From COMPARTMENTS

Gene-cellular compartment co-occurrence scores from text-mining biomedical abstracts

From CORUM

ong>Proteinong>s participating in complexes by manual literature curation

From Guide to Pharmacology

ong>Proteinong> ligand-receptor interactions curated by experts

From Human ong>Proteinong> Atlas

Semiquantitative ong>proteinong> expression profiles for tissues

From Human Proteome Map

ong>Proteinong> expression profiles for tissues and cell types

From InterPro

ong>Proteinong> domains predicted for gene products based on sequence similarity to known domain signatures

From LOCATE

Subcellular localization of ong>proteinong>s from low-throughput or high-throughput ong>proteinong> localization assays

From Nuclear Receptor Signaling Atlas

ong>Proteinong>s identified in complexes isolated from cultured cells

From Proteomics Database

ong>Proteinong> expression profiles for tissues and cell types reprocessed from many proteomics datasets

From SILAC Phosphoproteomics

Phosphorylation levels of ong>proteinong>s in cell lines following ligand treatment

From TISSUES

ong>Proteinong> tissue expression evidence scores by manual literature curation

From TISSUES

ong>Proteinong> tissue expression evidence scores by integrating experimental data

From TISSUES

Gene-tissue co-occurrence scores from text-mining biomedical abstracts

From Virus MINT

Interactions between viruses and human ong>proteinong>s manually curated from literature

From LOCATE

Subcellular localization of ong>proteinong>s by sequence similarity to localization sequences

From TISSUES

ong>Proteinong> tissue expression evidence scores by manual literature curation

From TISSUES

ong>Proteinong> tissue expression evidence scores by integrating experimental data

From TISSUES

Gene-tissue co-occurrence scores from text-mining biomedical abstracts

From COMPARTMENTS

ong>Proteinong> subcellular localization evidence scores by manual literature curation

From COMPARTMENTS

ong>Proteinong> subcellular localization evidence scores by integrating experimental data

From COMPARTMENTS

Gene-cellular compartment co-occurrence scores from text-mining biomedical abstracts

From Cell Maps for AI

ong>Proteinong> localization assemblies constructed from integrating AP-MS biomolecular interaction and IF imaging data

From Human ong>Proteinong> Atlas

RNA-seq gene expression profiles for cell lines from HPA

From Human ong>Proteinong> Atlas

RNA-seq gene expression profiles for tissues from HPA

From Human ong>Proteinong> Atlas

RNA-seq gene expression profiles for tissue samples from HPA