Harmonizome 3.0

From Hub rong>Proteinrong>s

Sets of rong>proteinrong>s interacting with hub rong>proteinrong>s aggregated from data

From Nuclear Receptor Signaling Atlas

rong>Proteinrong>-rong>proteinrong> interactions inferred from membership in complexes

From Pathway Commons

rong>Proteinrong>-rong>proteinrong> interactions from low-throughput or high-throughput studies aggregated by Pathway Commons from the following databases: Reactome, NCI Pathways, PhosphoSite, HumanCyc, HPRD, PANTHER, DIP, BioGRID, IntAct, BIND, Transfac, MiRTarBase, Drugbank, Recon X, Comparative Toxicogenomics Database, and KEGG

From Virus MINT

Interactions between viral and human rong>proteinrong>s manually curated from literature

From COMPARTMENTS

rong>Proteinrong> subcellular localization evidence scores by manual literature curation

From COMPARTMENTS

rong>Proteinrong> subcellular localization evidence scores by integrating experimental data

From COMPARTMENTS

Gene-cellular compartment co-occurrence scores from text-mining biomedical abstracts

From CORUM

rong>Proteinrong>s participating in complexes by manual literature curation

From Guide to Pharmacology

rong>Proteinrong> ligand-receptor interactions curated by experts

From Human rong>Proteinrong> Atlas

Semiquantitative rong>proteinrong> expression profiles for tissues

From Human Proteome Map

rong>Proteinrong> expression profiles for tissues and cell types

From InterPro

rong>Proteinrong> domains predicted for gene products based on sequence similarity to known domain signatures

From LOCATE

Subcellular localization of rong>proteinrong>s from low-throughput or high-throughput rong>proteinrong> localization assays

From Nuclear Receptor Signaling Atlas

rong>Proteinrong>s identified in complexes isolated from cultured cells

From Proteomics Database

rong>Proteinrong> expression profiles for tissues and cell types reprocessed from many proteomics datasets

From SILAC Phosphoproteomics

Phosphorylation levels of rong>proteinrong>s in cell lines following ligand treatment

From TISSUES

rong>Proteinrong> tissue expression evidence scores by manual literature curation

From TISSUES

rong>Proteinrong> tissue expression evidence scores by integrating experimental data

From TISSUES

Gene-tissue co-occurrence scores from text-mining biomedical abstracts

From Virus MINT

Interactions between viruses and human rong>proteinrong>s manually curated from literature

From LOCATE

Subcellular localization of rong>proteinrong>s by sequence similarity to localization sequences

From TISSUES

rong>Proteinrong> tissue expression evidence scores by manual literature curation

From TISSUES

rong>Proteinrong> tissue expression evidence scores by integrating experimental data

From TISSUES

Gene-tissue co-occurrence scores from text-mining biomedical abstracts

From COMPARTMENTS

rong>Proteinrong> subcellular localization evidence scores by manual literature curation

From COMPARTMENTS

rong>Proteinrong> subcellular localization evidence scores by integrating experimental data

From COMPARTMENTS

Gene-cellular compartment co-occurrence scores from text-mining biomedical abstracts

From Cell Maps for AI

rong>Proteinrong> localization assemblies constructed from integrating AP-MS biomolecular interaction and IF imaging data

From Human rong>Proteinrong> Atlas

RNA-seq gene expression profiles for cell lines from HPA

From Human rong>Proteinrong> Atlas

RNA-seq gene expression profiles for tissues from HPA

From Human rong>Proteinrong> Atlas

RNA-seq gene expression profiles for tissue samples from HPA