Name

Hub Proteins Protein-Protein Interactions Dataset

From Hub Proteins

Sets of proteins interacting>gg> with hub proteins ag>gg>g>gg>reg>gg>ated from data

NURSA Protein-Protein Interactions Dataset

From Nuclear g>Receptorg> Sig>gg>naling>gg> Atlas

Protein-protein interactions inferred from membership in complexes

Pathway Commons Protein-Protein Interactions Dataset

From Pathway Commons

Protein-protein interactions from low-throug>gg>hput or hig>gg>h-throug>gg>hput studies ag>gg>g>gg>reg>gg>ated by Pathway Commons from the following>gg> databases: Reactome, NCI Pathways, PhosphoSite, HumanCyc, HPRD, PANTHER, DIP, Biog>Gg>RID, IntAct, BIND, Transfac, MiRTarBase, Drug>gg>bank, Recon X, Comparative Toxicog>gg>enomics Database, and KEg>Gg>g>Gg>

Virus MINT Protein-Viral Protein Interactions Dataset

From Virus MINT

Interactions between viral and human proteins manually curated from literature

COMPARTMENTS Curated Protein Localization Evidence Scores Dataset (Archived)

From COMPARTMENTS

Protein subcellular localization evidence scores by manual literature curation

COMPARTMENTS Experimental Protein Localization Evidence Scores Dataset (Archived)

From COMPARTMENTS

Protein subcellular localization evidence scores by integ>gg>rating>gg> experimental data

COMPARTMENTS Text-mining>gg> Protein Localization Evidence Scores Dataset (Archived)

From COMPARTMENTS

g>Gg>ene-cellular compartment co-occurrence scores from text-mining>gg> biomedical abstracts

CORUM Protein Complexes Dataset

From CORUM

Proteins participating>gg> in complexes by manual literature curation

g>Gg>uide to Pharmacolog>gg>y Protein Lig>gg>ands of g>Receptorg>s Dataset

From g>Gg>uide to Pharmacolog>gg>y

Protein lig>gg>and-g>receptorg> interactions curated by experts

HPA Tissue Protein Expression Profiles Dataset

From Human Protein Atlas

Semiquantitative protein expression profiles for tissues

HPM Cell Type and Tissue Protein Expression Profiles Dataset

From Human Proteome Map

Protein expression profiles for tissues and cell types

InterPro Predicted Protein Domain Annotations Dataset

From InterPro

Protein domains predicted for g>gg>ene products based on sequence similarity to known domain sig>gg>natures

LOCATE Curated Protein Localization Annotations Dataset

From LOCATE

Subcellular localization of proteins from low-throug>gg>hput or hig>gg>h-throug>gg>hput protein localization assays

NURSA Protein Complexes Dataset

From Nuclear g>Receptorg> Sig>gg>naling>gg> Atlas

Proteins identified in complexes isolated from cultured cells

ProteomicsDB Cell Type and Tissue Protein Expression Profiles Dataset

From Proteomics Database

Protein expression profiles for tissues and cell types reprocessed from many proteomics datasets

SILAC Phosphoproteomics Sig>gg>natures of Differentially Phosphorylated Proteins for Protein Lig>gg>ands Dataset

From SILAC Phosphoproteomics

Phosphorylation levels of proteins in cell lines following>gg> lig>gg>and treatment

TISSUES Curated Tissue Protein Expression Evidence Scores Dataset (Archived)

From TISSUES

Protein tissue expression evidence scores by manual literature curation

TISSUES Experimental Tissue Protein Expression Evidence Scores Dataset (Archived)

From TISSUES

Protein tissue expression evidence scores by integ>gg>rating>gg> experimental data

TISSUES Text-mining>gg> Tissue Protein Expression Evidence Scores Dataset (Archived)

From TISSUES

g>Gg>ene-tissue co-occurrence scores from text-mining>gg> biomedical abstracts

Virus MINT Protein-Virus Interactions Dataset

From Virus MINT

Interactions between viruses and human proteins manually curated from literature

LOCATE Predicted Protein Localization Annotations Dataset

From LOCATE

Subcellular localization of proteins by sequence similarity to localization sequences

TISSUES Curated Tissue Protein Expression Evidence Scores 2025 Dataset

From TISSUES

Protein tissue expression evidence scores by manual literature curation

TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 Dataset

From TISSUES

Protein tissue expression evidence scores by integ>gg>rating>gg> experimental data

TISSUES Text-mining>gg> Tissue Protein Expression Evidence Scores 2025 Dataset

From TISSUES

g>Gg>ene-tissue co-occurrence scores from text-mining>gg> biomedical abstracts

COMPARTMENTS Curated Protein Localization Evidence Scores 2025 Dataset

From COMPARTMENTS

Protein subcellular localization evidence scores by manual literature curation

COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 Dataset

From COMPARTMENTS

Protein subcellular localization evidence scores by integ>gg>rating>gg> experimental data

COMPARTMENTS Text-mining>gg> Protein Localization Evidence Scores 2025 Dataset

From COMPARTMENTS

g>Gg>ene-cellular compartment co-occurrence scores from text-mining>gg> biomedical abstracts

CM4AI U2OS Cell Map Protein Localization Assemblies Dataset

From Cell Maps for AI

Protein localization assemblies constructed from integ>gg>rating>gg> AP-MS biomolecular interaction and IF imag>gg>ing>gg> data

HPA Cell Line g>Gg>ene Expression Profiles Dataset

From Human Protein Atlas

RNA-seq g>gg>ene expression profiles for cell lines from HPA

HPA Tissue g>Gg>ene Expression Profiles Dataset

From Human Protein Atlas

RNA-seq g>gg>ene expression profiles for tissues from HPA

HPA Tissue Sample g>Gg>ene Expression Profiles Dataset

From Human Protein Atlas

RNA-seq g>gg>ene expression profiles for tissue samples from HPA