Name

MSigDB Cancer Gene Co-expression Modules Dataset

From Molecular Signatures Database

Computational signatures of genes co-expressed with cancer related genes

MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations Dataset

From Molecular Signatures Database

Oncogenic signatures of genes differentially expressed following cancer gene perturbations

Sanger Dependency Map Cancer Cell Line Proteomics Dataset

From Sanger Cancer Dependency Map

Protein intensity values acquired using data-independent acquisition mass spectrometry (DIA-MS).

Biocarta Pathways Dataset

From Biocarta

Sets of proteins participating in pathways from Biocarta

HumanCyc Pathways Dataset

From HumanCyc

Sets of proteins participating in pathways from HumanCyc

KEGG Pathways Dataset (Archived)

From Kyoto Encyclopedia of Genes and Genomes

Sets of proteins participating in pathways from KEGG

PANTHER Pathways Dataset

From PANTHER

Sets of proteins participating in pathways from PANTHER

PID Pathways Dataset

From Pathway Interaction Database

Sets of proteins participating in pathways from PID

Reactome Pathways 2014 Dataset (Archived)

From Reactome

Sets of proteins participating in pathways from Reactome

WikiPathways Pathways 2014 Dataset (Archived)

From WikiPathways

Sets of proteins participating in pathways from WikiPathways

WikiPathways Pathways 2024 Dataset

From WikiPathways

Sets of proteins participating in pathways from WikiPathways updated for 2024

Reactome Pathways 2024 Dataset

From Reactome

Sets of proteins participating in pathways from Reactome, updated for 2024

KEGG Pathways 2026 Dataset

From Kyoto Encyclopedia of Genes and Genomes

Sets of proteins participating in pathways from KEGG

CCLE Cell Line Gene CNV Profiles Dataset

From Cancer Cell Line Encyclopedia

Gene-level copy number variation profiles for cancer cell lines

CCLE Cell Line Gene Expression Profiles Dataset

From Cancer Cell Line Encyclopedia

mRNA microarray expression profiles for cancer cell lines

CCLE Cell Line Gene Mutation Profiles Dataset

From Cancer Cell Line Encyclopedia

Gene-level mutation profiles for cancer cell lines

CCLE Cell Line Proteomics Dataset

From Cancer Cell Line Encyclopedia

Protein intensity values acquired using mass spectrometry across human cancerous cell lines

COSMIC Cell Line Gene CNV Profiles Dataset

From Catalogue of Somatic Mutations In Cancer

Gene-level copy number variation profiles for cancer cell lines

COSMIC Cell Line Gene Mutation Profiles Dataset

From Catalogue of Somatic Mutations In Cancer

Gene mutations in cancer cell lines from low-throughput or high-throughput studies

GDSC Cell Line Gene Expression Profiles Dataset

From Genomics of Drug Sensitivity in Cancer

mRNA microarray expression profiles for cancer cell lines

TCGA Signatures of Differentially Expressed Genes for Tumors Dataset

From The Cancer Genome Atlas

mRNA expression profiles for tumor and normal tissue samples

DepMap CRISPR Gene Dependency Dataset

From Cancer Dependency Map

Dependency scores for cell lines following single gene knockdowns