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CLOCK Geneclock circadian regulator The protein encoded by this gene plays a central role in the regulation of circadian rhythms. The protein encodes a transcription factor of the basic helix-loop-helix (bHLH) family and contains DNA binding histone acetyltransferase activity. The encoded protein forms a heterodimer with ARNTL (BMAL1) that binds E-box enhancer elements upstream of Period (PER1, PER2, PER3) and Cryptochrome (CRY1, CRY2) genes and activates transcription of these genes. PER and CRY proteins heterodimerize and repress their own transcription by interacting in a feedback loop with CLOCK/ARNTL complexes. Polymorphisms in this gene may be associated with behavioral changes in certain populations and with obesity and metabolic syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014] |
CLOCK Gene SetFrom ChEA Transcription Factor Targets target genes of the CLOCK transcription factor in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. |
clock Gene SetFrom GeneRIF Biological Term Annotations genes co-occuring with the biological term clock in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. |
CLOCK Gene SetFrom Pathway Commons Protein-Protein Interactions interacting proteins for CLOCK from the Pathway Commons Protein-Protein Interactions dataset. |
CLOCK Gene SetFrom LINCS L1000 CMAP CRISPR Knockout Consensus Signatures genes differentially expressed following the CLOCK gene perturbation from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. |
CLOCK Gene SetFrom JASPAR Predicted Human Transcription Factor Targets 2025 target genes of the CLOCK transcription factor predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. |
CLOCK Gene SetFrom CM4AI KOLF21J CRISPRi Gene Perturbation Atlas genes differentially expressed following the CLOCK gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas. |
segmentation clock Gene SetFrom Biocarta Pathways proteins participating in the segmentation clock pathway from the Biocarta Pathways dataset. |
CLOCK-20551151-293T-HUMAN Gene SetFrom ChEA Transcription Factor Binding Site Profiles genes with transcription factor binding evidence in the CLOCK-20551151-293T-HUMAN transcription factor binding site profile from the CHEA Transcription Factor Binding Site Profiles dataset. |
entrainment of circadian clock Gene SetFrom GO Biological Process Annotations 2015 genes participating in the entrainment of circadian clock biological process from the curated GO Biological Process Annotations 2015 dataset. |
entrainment of circadian clock by photoperiod Gene SetFrom GO Biological Process Annotations 2015 genes participating in the entrainment of circadian clock by photoperiod biological process from the curated GO Biological Process Annotations 2015 dataset. |
prolonged somite segmentation clock period Gene SetFrom MPO Gene-Phenotype Associations gene mutations causing the prolonged somite segmentation clock period phenotype in transgenic mice from the MPO Gene-Phenotype Associations dataset. |
abnormal somite segmentation clock Gene SetFrom MPO Gene-Phenotype Associations gene mutations causing the abnormal somite segmentation clock phenotype in transgenic mice from the MPO Gene-Phenotype Associations dataset. |
BL9468 (CLOCK) Gene Setproteins in the BL9468 (CLOCK) protein complex recovered by IP-MS from the NURSA Protein Complexes dataset. |
Circadian clock system Gene SetFrom PANTHER Pathways proteins participating in the Circadian clock system pathway from the PANTHER Pathways dataset. |
BMAL1:CLOCK,NPAS2 activates circadian gene expression Gene Setproteins participating in the BMAL1:CLOCK,NPAS2 activates circadian gene expression pathway from the Reactome Pathways dataset. |
Circadian Clock Gene Setproteins participating in the Circadian Clock pathway from the Reactome Pathways dataset. |
entrainment of circadian clock by photoperiod Gene SetFrom GO Biological Process Annotations 2023 genes participating in the entrainment of circadian clock by photoperiod biological process from the curated GO Biological Process Annotations 2023 dataset. |
CLOCK-BMAL transcription complex Gene SetFrom GO Cellular Component Annotations 2023 proteins localized to the CLOCK-BMAL transcription complex cellular component from the curated GO Cellular Component Annotations 2023 dataset. |
CLOCK-20551151-293T-HUMAN Gene SetFrom ChEA Transcription Factor Targets 2022 target genes of the CLOCK-20551151-293T-HUMAN transcription factor in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. |
abnormal somite segmentation clock Gene SetFrom MGI Mouse Phenotype Associations 2023 gene mutations causing the abnormal somite segmentation clock phenotype in transgenic mice from the MGI Mouse Phenotype Associations 2023 dataset. |
prolonged somite segmentation clock period Gene SetFrom MGI Mouse Phenotype Associations 2023 gene mutations causing the prolonged somite segmentation clock period phenotype in transgenic mice from the MGI Mouse Phenotype Associations 2023 dataset. |
Clock controlled autophagy in bone metabolism Gene SetFrom WikiPathways Pathways 2024 proteins participating in the Clock controlled autophagy in bone metabolism pathway from the WikiPathways Pathways 2024 dataset. |
BMAL1:CLOCK,NPAS2 activates circadian gene expression Gene Setproteins participating in the BMAL1:CLOCK,NPAS2 activates circadian gene expression pathway from the Reactome Pathways 2024 dataset. |
Circadian Clock Gene Setproteins participating in the Circadian Clock pathway from the Reactome Pathways 2024 dataset. |
entrainment of circadian clock by photoperiod Gene SetFrom GO Biological Process Annotations 2025 genes participating in the entrainment of circadian clock by photoperiod biological process from the curated GO Biological Process Annotations 2025 dataset. |
CLOCK-BMAL transcription complex Gene SetFrom GO Cellular Component Annotations 2025 proteins localized to the CLOCK-BMAL transcription complex cellular component from the curated GO Cellular Component Annotations 2025 dataset. |
CLOCK-BMAL transcription complex Gene SetFrom COMPARTMENTS Curated Protein Localization Evidence Scores 2025 proteins localized to the CLOCK-BMAL transcription complex cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. |
CLOCK-BMAL transcription complex Gene SetFrom COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 proteins co-occuring with the CLOCK-BMAL transcription complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. |