| Name |
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GO Molecular Function Annotations 2015 Dataset (Archived)From Gene Ontology Curated annotations of genes with molecular functions |
GO Molecular Function Annotations 2023 Dataset (Archived)From Gene Ontology Curated annotations of genes with molecular functions |
GO Molecular Function Annotations 2025 DatasetFrom Gene Ontology curated annotations of genes with molecular functions |
Achilles Cell Line Gene Essentiality Profiles DatasetFrom Achilles Fitness scores for cell lines following single gene knockdowns |
BioGPS Cell Line Gene Expression Profiles DatasetFrom BioGPS mRNA expression profiles for the NCI-60 panel of cancer cell lines |
BioGPS Human Cell Type and Tissue Gene Expression Profiles DatasetFrom BioGPS mRNA expression profiles for human tissues and cell types |
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles DatasetFrom BioGPS mRNA expression profiles for mouse tissues and cell types |
CCLE Cell Line Gene CNV Profiles DatasetFrom Cancer Cell Line Encyclopedia Gene-level copy number variation profiles for cancer cell lines |
CCLE Cell Line Gene Expression Profiles DatasetFrom Cancer Cell Line Encyclopedia mRNA microarray expression profiles for cancer cell lines |
CCLE Cell Line Gene Mutation Profiles DatasetFrom Cancer Cell Line Encyclopedia Gene-level mutation profiles for cancer cell lines |
COSMIC Cell Line Gene CNV Profiles DatasetFrom Catalogue of Somatic Mutations In Cancer Gene-level copy number variation profiles for cancer cell lines |
COSMIC Cell Line Gene Mutation Profiles DatasetFrom Catalogue of Somatic Mutations In Cancer Gene mutations in cancer cell lines from low-throughput or high-throughput studies |
GDSC Cell Line Gene Expression Profiles DatasetFrom Genomics of Drug Sensitivity in Cancer mRNA microarray expression profiles for cancer cell lines |
Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles DatasetFrom Heiser et al., PNAS, 2011 mRNA expression profiles for breast cancer cell lines measured by microarray |
HPA Cell Line Gene Expression Profiles DatasetFrom Human Protein Atlas RNA-seq gene expression profiles for cell lines from HPA |
HPM Cell Type and Tissue Protein Expression Profiles DatasetFrom Human Proteome Map Protein expression profiles for tissues and cell types |
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles DatasetFrom Klijn et al., Nat. Biotechnol., 2015 Gene-level copy number variation profiles for cancer cell lines |
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles DatasetFrom Klijn et al., Nat. Biotechnol., 2015 RNA-seq gene expression profiles for cancer cell lines |
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles DatasetFrom Klijn et al., Nat. Biotechnol., 2015 SNP gene mutations in cancer cell lines identified by microarray |
ProteomicsDB Cell Type and Tissue Protein Expression Profiles DatasetFrom Proteomics Database Protein expression profiles for tissues and cell types reprocessed from many proteomics datasets |
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles DatasetFrom Roadmap Epigenomics DNA methylation profiles for primary cell types and tissues |
Roadmap Epigenomics Cell and Tissue Gene Expression Profiles DatasetFrom Roadmap Epigenomics mRNA expression profiles for primary cell types and tissues |
Sanger Dependency Map Cancer Cell Line Proteomics DatasetFrom Sanger Cancer Dependency Map Protein intensity values acquired using data-independent acquisition mass spectrometry (DIA-MS). |
Tabula Sapiens Gene-Cell Associations DatasetFrom Tabula Sapiens Gene expression data from Tabula Sapiens scRNA-seq counts |
CCLE Cell Line Proteomics DatasetFrom Cancer Cell Line Encyclopedia Protein intensity values acquired using mass spectrometry across human cancerous cell lines |
HuBMAP Azimuth Cell Type Annotations DatasetFrom The Human BioMolecular Atlas Program Gene-cell type annotations from integrated reference scRNA-seq gene expression profiles |
CellMarker Gene-Cell Type Associations DatasetFrom CellMarker Cell type markers across various tissues from human and mouse scRNA-seq |
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures DatasetFrom Replogle et al., Cell, 2022 Gene expression profiles in the K562 cell line following CRISPRi genetic perturbation |
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures DatasetFrom Replogle et al., Cell, 2022 Gene expression profiles in the K562 cell line following CRISPRi genetic perturbation of essential genes |
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures DatasetFrom Replogle et al., Cell, 2022 Gene expression profiles in the RPE1 cell line following CRISPRi genetic perturbation of essential genes |
CM4AI U2OS Cell Map Protein Localization Assemblies DatasetFrom Cell Maps for AI Protein localization assemblies constructed from integrating AP-MS biomolecular interaction and IF imaging data |
GeneRIF Biological Term Annotations DatasetFrom Gene Reference Into Function Statements describing functions of genes distilled from biomedical publications |
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas DatasetFrom Cell Maps for AI Gene expression profiles in the KOLF2.1J cell line following CRISPRi genetic perturbation |