| Name |
|---|
VMO1 Genevitelline membrane outer layer 1 homolog (chicken) Located in extracellular exosome. [provided by Alliance of Genome Resources, Mar 2025] |
LOC729057 Genetranslocase of outer mitochondrial membrane 40 homolog (yeast) pseudogene |
ODF3 Geneouter dense fiber of sperm tails 3 ODF3 is a component of sperm flagella outer dense fibers, which add stiffness, elastic recoil, and protection against shearing forces during sperm movement.[supplied by OMIM, Apr 2004] |
ODF2 Geneouter dense fiber of sperm tails 2 The outer dense fibers are cytoskeletal structures that surround the axoneme in the middle piece and principal piece of the sperm tail. The fibers function in maintaining the elastic structure and recoil of the sperm tail as well as in protecting the tail from shear forces during epididymal transport and ejaculation. Defects in the outer dense fibers lead to abnormal sperm morphology and infertility. This gene encodes one of the major outer dense fiber proteins. Alternative splicing results in multiple transcript variants. The longer transcripts, also known as 'Cenexins', encode proteins with a C-terminal extension that are differentially targeted to somatic centrioles and thought to be crucial for the formation of microtubule organizing centers. [provided by RefSeq, Oct 2010] |
ODF1 Geneouter dense fiber of sperm tails 1 The outer dense fibers are cytoskeletal structures that surround the axoneme in the middle piece and principal piece of the sperm tail. The fibers function in maintaining the elastic structure and recoil of the sperm tail as well as in protecting the tail from shear forces during epididymal transport and ejaculation. Defects in the outer dense fibers lead to abnormal sperm morphology and infertility. The human outer dense fibers contains at least 10 major proteins and this gene encodes the main protein. [provided by RefSeq, Jul 2008] |
ODF4 Geneouter dense fiber of sperm tails 4 This gene encodes a protein that is localized in the outer dense fibers of the tails of mature sperm. This protein is thought to have some important role in the sperm tail. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016] |
FIS1 Genefission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) Enables identical protein binding activity; lipid binding activity; and molecular adaptor activity. Involved in several processes, including negative regulation of ATP metabolic process; negative regulation of fatty acid transport; and organelle fission. Acts upstream of or within mitochondrion organization. Located in mitochondrial outer membrane and peroxisomal membrane. Part of protein-containing complex. Biomarker of Alzheimer's disease. [provided by Alliance of Genome Resources, Mar 2025] |
TOMM40 Genetranslocase of outer mitochondrial membrane 40 homolog (yeast) The protein encoded by this gene is localized in the outer membrane of the mitochondria. It is the channel-forming subunit of the translocase of the mitochondrial outer membrane (TOM) complex that is essential for import of protein precursors into mitochondria. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Aug 2015] |
ODF2L Geneouter dense fiber of sperm tails 2-like Involved in negative regulation of cilium assembly. Located in centriolar satellite and ciliary basal body. [provided by Alliance of Genome Resources, Mar 2025] |
ROM1 Generetinal outer segment membrane protein 1 This gene is a member of a photoreceptor-specific gene family and encodes an integral membrane protein found in the photoreceptor disk rim of the eye. This protein can form homodimers or can heterodimerize with another photoreceptor, retinal degeneration slow (RDS). It is essential for disk morphogenesis, and may also function as an adhesion molecule involved in the stabilization and compaction of outer segment disks or in the maintenance of the curvature of the rim. Certain defects in this gene have been associated with the degenerative eye disease retinitis pigmentosa. [provided by RefSeq, Jul 2008] |
TOMM40L Genetranslocase of outer mitochondrial membrane 40 homolog (yeast)-like Predicted to enable protein transmembrane transporter activity. Predicted to be involved in protein import into mitochondrial matrix. Located in mitochondrion. Part of protein-containing complex. [provided by Alliance of Genome Resources, Mar 2025] |
TOMM6 Genetranslocase of outer mitochondrial membrane 6 homolog (yeast) Predicted to be involved in protein insertion into mitochondrial outer membrane. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
TOMM7 Genetranslocase of outer mitochondrial membrane 7 homolog (yeast) This gene encodes a subunit of the translocase of the outer mitochondrial membrane. The encoded protein regulates the assembly and stability of the translocase complex. [provided by RefSeq, Oct 2012] |
TOMM5 Genetranslocase of outer mitochondrial membrane 5 homolog (yeast) Predicted to be involved in protein insertion into mitochondrial outer membrane. Located in mitochondrion. Part of mitochondrial outer membrane translocase complex. [provided by Alliance of Genome Resources, Mar 2025] |
TOMM20 Genetranslocase of outer mitochondrial membrane 20 homolog (yeast) Enables mitochondrion targeting sequence binding activity; protein-transporting ATPase activity; and unfolded protein binding activity. Involved in protein targeting to mitochondrion. Located in mitochondria-associated endoplasmic reticulum membrane contact site and mitochondrial outer membrane. Is active in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
TOMM22 Genetranslocase of outer mitochondrial membrane 22 homolog (yeast) The protein encoded by this gene is an integral membrane protein of the mitochondrial outer membrane. The encoded protein interacts with TOMM20 and TOMM40, and forms a complex with several other proteins to import cytosolic preproteins into the mitochondrion. [provided by RefSeq, Jul 2008] |
ODF3L2 Geneouter dense fiber of sperm tails 3-like 2 Located in cytoplasmic microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
ODF3L1 Geneouter dense fiber of sperm tails 3-like 1 Predicted to be active in cytoskeleton. [provided by Alliance of Genome Resources, Mar 2025] |
LOC727980 Genetranslocase of outer mitochondrial membrane 40 homolog (yeast) pseudogene |
LOC642661 Genetranslocase of outer mitochondrial membrane 40 homolog (yeast) pseudogene |
TOMM70A Genetranslocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) This gene encodes an import receptor of the outer mitochondrial membrane that is part of the translocase of the outer membrane complex. This protein is involved in the import of mitochondrial precursor proteins. The protein interacts with the SARS-CoV and SARS-Cov-2 ORF9b proteins. [provided by RefSeq, Dec 2021] |
ODF3B Geneouter dense fiber of sperm tails 3B Predicted to be located in motile cilium. Predicted to be active in cytoskeleton. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100422473 Genetranslocase of outer mitochondrial membrane 40 homolog (yeast) pseudogene |
TOMM20L Genetranslocase of outer mitochondrial membrane 20 homolog (yeast)-like Predicted to enable mitochondrion targeting sequence binding activity. Predicted to contribute to protein transmembrane transporter activity. Predicted to be involved in protein import into mitochondrial matrix and tRNA import into mitochondrion. Predicted to be located in mitochondrial outer membrane. Predicted to be part of mitochondrial outer membrane translocase complex. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100131779 Genetranslocase of outer mitochondrial membrane 6 homolog (yeast) pseudogene |
LOC646639 Genetranslocase of outer mitochondrial membrane 40 homolog (yeast) pseudogene |
LOC100506224 Genetranslocase of outer mitochondrial membrane 5 homolog (yeast) pseudogene |
LOC100129626 Genetranslocase of outer mitochondrial membrane 5 homolog (yeast) pseudogene |
TOMM34 Genetranslocase of outer mitochondrial membrane 34 The protein encoded by this gene is involved in the import of precursor proteins into mitochondria. The encoded protein has a chaperone-like activity, binding the mature portion of unfolded proteins and aiding their import into mitochondria. This protein, which is found in the cytoplasm and sometimes associated with the outer mitochondrial membrane, has a weak ATPase activity and contains 6 TPR repeats. [provided by RefSeq, Jul 2008] |
CYB5B Genecytochrome b5 type B (outer mitochondrial membrane) Enables heme binding activity. Contributes to nitrite reductase (NO-forming) activity. Involved in nitric oxide biosynthetic process. Located in membrane. Part of nitric-oxide synthase complex. [provided by Alliance of Genome Resources, Mar 2025] |
TOMM70 Genetranslocase of outer mitochondrial membrane 70 This gene encodes an import receptor of the outer mitochondrial membrane that is part of the translocase of the outer membrane complex. This protein is involved in the import of mitochondrial precursor proteins. The protein interacts with the SARS-CoV and SARS-Cov-2 ORF9b proteins. [provided by RefSeq, Dec 2021] |
ODAD1 Geneouter dynein arm docking complex subunit 1 This gene encodes a coiled-coil domain-containing protein that is a component of the outer dynein arm docking complex in cilia cells. Mutations in this gene may cause primary ciliary dyskinesia 20. [provided by RefSeq, May 2013] |
ODAD4 Geneouter dynein arm docking complex subunit 4 This gene encodes a tetratricopeptide repeat domain-containing protein that localizes to ciliary axonmenes and plays a role in the docking of the outer dynein arm to cilia. Mutations in this gene cause severely reduced ciliary motility and the disorder CILD35 (ciliary dyskinesia,primary, 35). Primary ciliary dyskinesia is often associated with recurrent respiratory infections, immotile spermatozoa, and situs inversus; an inversion in left-right body symmetry. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Apr 2017] |
ODAD2 Geneouter dynein arm docking complex subunit 2 The protein encoded by this gene contains ten Armadillo repeat motifs (ARMs) and one HEAT repeat, and is thought to be involved in ciliary and flagellar movement. This protein has been shown to localize to the ciliary axonemes and at the ciliary base of respiratory cells. Studies indicate that mutations in this gene cause partial outer dynein arm (ODA) defects in respiratory cilia. The cilia of cells with mutations in this gene displayed either reduced ciliary beat frequency and amplitude, or, complete immotility. Some individuals with primary ciliary dyskensia (PCD) have been shown to have mutations in this gene. PCD is characterized by chronic airway disease and left/right body asymmetry defects. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Aug 2015] |
ODAD3 Geneouter dynein arm docking complex subunit 3 This gene encodes a protein containing coiled-coil domains. The encoded protein functions in outer dynein arm assembly and is required for motile cilia function. Mutations in this gene result in primary ciliary dyskinesia. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Oct 2014] |
C19ORF12 Genechromosome 19 open reading frame 12 This gene encodes a small transmembrane protein. Mutations in this gene are a cause of neurodegeneration with brain iron accumulation-4 (NBIA4), but the specific function of the encoded protein is unknown. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Dec 2011] |
C10ORF88 Genechromosome 10 open reading frame 88 Enables ATP hydrolysis activity. Predicted to be involved in chromatin looping and chromatin remodeling. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100288542 Genechromosome 14 open reading frame 119 pseudogene |
C22ORF39 Genechromosome 22 open reading frame 39 Predicted to be involved in negative regulation of long-term synaptic potentiation. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C22ORF31 Genechromosome 22 open reading frame 31 |
C22ORF34 Genechromosome 22 open reading frame 34 |
C1ORF189 Genechromosome 1 open reading frame 189 Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF185 Genechromosome 1 open reading frame 185 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF186 Genechromosome 1 open reading frame 186 Enables erythropoietin receptor binding activity. Involved in erythropoietin-mediated signaling pathway and positive regulation of erythrocyte differentiation. Located in plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
CXORF58 Genechromosome X open reading frame 58 |
CXORF56 Genechromosome X open reading frame 56 While this gene is well-supported by transcript data, no functional information on its protein products is currently available. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2009] |
CXORF57 Genechromosome X open reading frame 57 Enables single-stranded DNA binding activity. Involved in negative regulation of double-strand break repair via homologous recombination. Located in nuclear speck and replication fork. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF4 Genechromosome 12 open reading frame 4 This gene is highly conserved from nematodes to humans. In rat, the orthologous gene encodes a cytoplasmic protein that is involved in mast cell degranulation. The human gene has been implicated in autosomal recessive intellectual disability. [provided by RefSeq, Sep 2016] |
C14ORF119 Genechromosome 14 open reading frame 119 Located in cytosol and mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C18ORF15 Genechromosome 18 open reading frame 15 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
DUP5P13 GeneChromosome 5p13 duplication syndrome |
C10ORF105 Genechromosome 10 open reading frame 105 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF107 Genechromosome 10 open reading frame 107 Predicted to enable calcium ion binding activity. Predicted to act upstream of or within sperm flagellum assembly. Predicted to be located in centrosome; cytoplasm; and sperm flagellum. [provided by Alliance of Genome Resources, Mar 2025] |
BMIQ7 GeneObesity, susceptibility to, on chromosome 4 |
C1ORF234 Genechromosome 1 open reading frame 234 Predicted to be involved in single fertilization. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF81 Genechromosome 2 open reading frame 81 Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420788 Genechromosome 2 open reading frame 27A pseudogene |
C14ORF79 Genechromosome 14 open reading frame 79 Predicted to enable clathrin binding activity. Predicted to be involved in intracellular transport. Predicted to be part of AP-1 adaptor complex. Predicted to be active in trans-Golgi network membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF96 Genechromosome 20 open reading frame 96 |
C17ORF47 Genechromosome 17 open reading frame 47 |
C17ORF49 Genechromosome 17 open reading frame 49 Enables identical protein binding activity. Predicted to be involved in chromatin organization. Located in cytosol and nucleoplasm. Part of MLL1 complex and NURF complex. [provided by Alliance of Genome Resources, Mar 2025] |
DEL15Q26QTER GeneChromosome 15q26-qter deletion syndrome |
C11ORF49 Genechromosome 11 open reading frame 49 Enables protein-macromolecule adaptor activity. Involved in regulation of protein complex stability. Is active in centriolar satellite. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF40 Genechromosome 11 open reading frame 40 |
C11ORF42 Genechromosome 11 open reading frame 42 |
C11ORF45 Genechromosome 11 open reading frame 45 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF18 Genechromosome 19 open reading frame 18 Located in extracellular exosome. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF43 Genechromosome 7 open reading frame 43 Enables alpha-tubulin binding activity. Involved in cilium assembly and regulation of cell population proliferation. Located in several cellular components, including microtubule cytoskeleton; midbody; and plasma membrane. Part of TRAPPII protein complex. Implicated in primary autosomal recessive microcephaly. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420668 Genechromosome 2 open reading frame 16 pseudogene |
C9ORF118 Genechromosome 9 open reading frame 118 |
C9ORF117 Genechromosome 9 open reading frame 117 Predicted to enable microtubule binding activity. Predicted to be involved in sperm axoneme assembly. Located in cytosol; intracellular membrane-bounded organelle; and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF116 Genechromosome 9 open reading frame 116 Predicted to be involved in axoneme assembly; establishment of left/right asymmetry; and flagellated sperm motility. Predicted to act upstream of or within DNA damage response; cellular response to UV-C; and regulation of gene expression. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF114 Genechromosome 9 open reading frame 114 Enables miRNA binding activity. Involved in maintenance of centrosome location and miRNA processing. Acts upstream of with a positive effect on post-transcriptional regulation of gene expression. Located in kinetochore; mitotic spindle; and spindle pole centrosome. [provided by Alliance of Genome Resources, Mar 2025] |
LOC724065 Genechromosome 19 open reading frame 53 pseudogene |
C20ORF197 Genechromosome 20 open reading frame 197 |
C1ORF100 Genechromosome 1 open reading frame 100 |
C1ORF101 Genechromosome 1 open reading frame 101 Predicted to be involved in flagellated sperm motility and sperm capacitation. Located in sperm principal piece. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF105 Genechromosome 1 open reading frame 105 |
C1ORF106 Genechromosome 1 open reading frame 106 Involved in several processes, including nucleotide-binding activity oligomerization domain containing 2 signaling pathway; positive regulation of cytokine production; and positive regulation of intracellular signal transduction. Located in cytoplasm and nuclear body. Implicated in inflammatory bowel disease 29. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF109 Genechromosome 1 open reading frame 109 Involved in ribosomal large subunit biogenesis. Located in cytosol; nucleolus; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100526839 Genechromosome 18 open reading frame 32 pseudogene |
LOC100526838 Genechromosome 18 open reading frame 32 pseudogene |
C4ORF36 Genechromosome 4 open reading frame 36 |
C4ORF32 Genechromosome 4 open reading frame 32 Located in Golgi apparatus. [provided by Alliance of Genome Resources, Mar 2025] |
C8ORF33 Genechromosome 8 open reading frame 33 |
C8ORF31 Genechromosome 8 open reading frame 31 |
C8ORF37 Genechromosome 8 open reading frame 37 This gene encodes a ubiquitously expressed protein of unknown function. It has high levels of mRNA expression in the brain, heart, and retina and the protein co-localizes with polyglutamylated tubulin at the base of the primary cilium in human retinal pigment epithelial cells. Mutations in this gene have been associated with autosomal recessive cone-rod dystrophy (arCRD) and retinitis pigmentosa (arRP). [provided by RefSeq, Mar 2012] |
C8ORF34 Genechromosome 8 open reading frame 34 This gene encodes a protein that is related to the cyclic AMP dependent protein kinase regulators. Naturally occurring mutations in this gene are associated with an increased risk for severe toxicities, such as diarrhea and neutropenia, in patients undergoing chemotherapeutic treatment. [provided by RefSeq, Mar 2017] |
C3ORF67 Genechromosome 3 open reading frame 67 |
C3ORF62 Genechromosome 3 open reading frame 62 Predicted to be involved in spermatogenesis. [provided by Alliance of Genome Resources, Mar 2025] |
XCE GeneX chromosome controlling element |
DCR GeneDown syndrome chromosome region Down syndrome, also known as trisomy 21, is the most frequent form of cognitive disability caused by a microscopically demonstrable chromosomal aberration. It is caused by a third copy (trisomy) of all or a critical portion of chromosome 21. Down syndrome is characterized by physical growth delays, dysmorphic facial features, heart and gastrointestinal disorders, and mild to moderate cognitive disability. [provided by RefSeq, Jul 2017] |
DEL15Q11.2 GeneChromosome 15q11.2 deletion syndrome |
C16ORF46 Genechromosome 16 open reading frame 46 Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
LOC646058 Genechromosome 4 open reading frame 27 pseudogene |
CXORF49B Genechromosome X open reading frame 49B |
DEL1Q43Q44 GeneChromosome 1q42-q44 deletion syndrome |
C10ORF82 Genechromosome 10 open reading frame 82 Predicted to be involved in flagellated sperm motility. Predicted to be located in several cellular components, including cytoskeleton; motile cilium; and nucleus. Predicted to be active in axonemal A tubule inner sheath and sperm flagellum. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100859919 Genechromosome 9 open reading frame 86 pseudogene 2 |
LOC100129478 Genechromosome 4 open reading frame 46 pseudogene |
C1ORF27 Genechromosome 1 open reading frame 27 Predicted to be involved in protein localization. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
S7 Genesurface antigen (chromosome 7) 2 |
C9ORF92 Genechromosome 9 open reading frame 92 |
C18ORF32 Genechromosome 18 open reading frame 32 Involved in positive regulation of canonical NF-kappaB signal transduction. Located in endoplasmic reticulum and lipid droplet. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF34 Genechromosome 7 open reading frame 34 Predicted to be involved in fusion of sperm to egg plasma membrane involved in single fertilization. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF33 Genechromosome 7 open reading frame 33 |
C7ORF31 Genechromosome 7 open reading frame 31 Located in centrosome. [provided by Alliance of Genome Resources, Mar 2025] |
CXDUPQ26.3 GeneChromosome Xq26.3 duplication syndrome |
ADIPQTL2 GeneCirculating adiponectin QTL on chromosome 5 |
C6ORF99 Genechromosome 6 open reading frame 99 |
BMIQ10 GeneObesity, susceptibility to, on chromosome 10q |
BMIQ16 GeneChromosome 16p11.2 deletion syndrome, 220kb |
DEL19P13.13 GeneChromosome 19p13.13 deletion syndrome |
TRIP4Q32.1Q32.2 GeneChromosome 4q32.1-q32.2 triplication syndrome |
C3CER1 Genechromosome 3 common eliminated region 1 |
DEL3Q13.31 GeneChromosome 3q13.31 deletion syndrome |
C19ORF66 Genechromosome 19 open reading frame 66 This gene is an interferon stimulated gene (ISG) that inhibits viral replication. The encoded protein binds nucleic acids and inhibits programmed -1 ribosomal frameshifting required for translation by many RNA viruses. Viruses inhibited by the protein include Zika virus, dengue virus and the coronaviruses, SARS-CoV and SARS-CoV2. [provided by RefSeq, Aug 2021] |
C19ORF60 Genechromosome 19 open reading frame 60 |
C19ORF68 Genechromosome 19 open reading frame 68 Predicted to act upstream of or within hematopoietic progenitor cell differentiation. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF132 Genechromosome 6 open reading frame 132 |
C6ORF136 Genechromosome 6 open reading frame 136 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF56 Genechromosome 12 open reading frame 56 |
DEL15Q25 GeneChromosome 15q25 deletion syndrome |
NHCP1 Genenon-histone chromosome protein 1 |
C21ORF33 Genechromosome 21 open reading frame 33 This gene encodes a potential mitochondrial protein that is a member of the DJ-1/PfpI gene family. This protein is overexpressed in fetal Down syndrome brain. Alternate splicing results in multiple transcript variants. [provided by RefSeq, May 2010] |
LOC101241902 Genechromosome 4 open reading frame 46 pseudogene |
C2ORF48 Genechromosome 2 open reading frame 48 |
C2ORF44 Genechromosome 2 open reading frame 44 Enables kinase binding activity. Involved in protein complex oligomerization. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF47 Genechromosome 2 open reading frame 47 Predicted to enable ribosome binding activity. Involved in calcium import into the mitochondrion; mitochondrial calcium ion homeostasis; and protein insertion into mitochondrial membrane. Located in mitochondrial matrix. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF40 Genechromosome 2 open reading frame 40 Enables neuropeptide hormone activity. Involved in neuropeptide signaling pathway; positive regulation of hormone secretion; and vasopressin secretion. Located in apical plasma membrane; dense core granule; and extracellular space. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF42 Genechromosome 2 open reading frame 42 Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
DELXP21 GeneChromosome Xp21 deletion syndrome |
C20ORF141 Genechromosome 20 open reading frame 141 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF144 Genechromosome 20 open reading frame 144 |
DEL17Q12 GeneChromosome 17q12 deletion syndrome |
LOC100505642 Genechromosome 9 open reading frame 85 pseudogene |
C8ORF89 Genechromosome 8 open reading frame 89 |
C8ORF88 Genechromosome 8 open reading frame 88 Predicted to enable eukaryotic initiation factor 4E binding activity. Predicted to be involved in negative regulation of translational initiation. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C8ORF82 Genechromosome 8 open reading frame 82 Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C8ORF87 Genechromosome 8 open reading frame 87 |
C8ORF86 Genechromosome 8 open reading frame 86 |
C14ORF169 Genechromosome 14 open reading frame 169 Enables peptidyl-histidine dioxygenase activity and protein demethylase activity. Predicted to be involved in negative regulation of DNA-templated transcription; negative regulation of osteoblast differentiation; and protein demethylation. Located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
C14ORF166 Genechromosome 14 open reading frame 166 Enables RNA binding activity; RNA polymerase II complex binding activity; and identical protein binding activity. Involved in negative regulation of protein kinase activity; positive regulation of transcription by RNA polymerase II; and tRNA splicing, via endonucleolytic cleavage and ligation. Located in microtubule cytoskeleton; nucleoplasm; and perinuclear region of cytoplasm. Part of tRNA-splicing ligase complex. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF10 Genechromosome 6 open reading frame 10 Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF15 Genechromosome 6 open reading frame 15 Predicted to enable several functions, including collagen V binding activity; fibronectin binding activity; and glycosaminoglycan binding activity. Predicted to be involved in extracellular matrix organization. Predicted to be located in interstitial matrix. Predicted to be active in extracellular matrix. [provided by Alliance of Genome Resources, Mar 2025] |
LOC105369237 Genesperm protein associated with the nucleus on the X chromosome B/F |
C17ORF99 Genechromosome 17 open reading frame 99 Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in cell surface receptor signaling pathway; mature B cell differentiation involved in immune response; and positive regulation of immunoglobulin production in mucosal tissue. Located in extracellular space. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF98 Genechromosome 17 open reading frame 98 |
C17ORF97 Genechromosome 17 open reading frame 97 Predicted to enable molecular condensate scaffold activity. Predicted to be involved in membraneless organelle assembly and protein arginylation. Predicted to be located in cytoplasm and nucleus. Predicted to be active in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF96 Genechromosome 17 open reading frame 96 Predicted to enable chromatin binding activity. Predicted to be involved in neuron fate commitment; regulation of transcription by RNA polymerase II; and stem cell differentiation. Predicted to be located in chromosome and nucleus. Predicted to be part of ESC/E(Z) complex and elongin complex. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF61 Genechromosome 15 open reading frame 61 Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF65 Genechromosome 15 open reading frame 65 Predicted to be involved in axoneme assembly; determination of left/right symmetry; and flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF44 Genechromosome 19 open reading frame 44 |
WHCR GeneWolf-Hirschhorn syndrome chromosome region Wolf-Hirschhorn syndrome is a congenital malformation syndrome characterized by pre- and postnatal growth deficiency, developmental disability of variable degree, characteristic craniofacial features ('Greek warrior helmet' appearance of the nose, high forehead, prominent glabella, hypertelorism, high-arched eyebrows, protruding eyes, epicanthal folds, short philtrum, distinct mouth with downturned corners, and micrognathia), and a seizure disorder (Battaglia et al., 2008 [PubMed 18932224]).[supplied by OMIM, Nov 2010] |
DEL2Q23.1 GeneChromosome 2q23.1 deletion syndrome |
C22ORF42 Genechromosome 22 open reading frame 42 |
C22ORF46 Genechromosome 22 open reading frame 46 |
C1ORF95 Genechromosome 1 open reading frame 95 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF94 Genechromosome 1 open reading frame 94 |
HPCQTL19 GeneProstate cancer aggressiveness quantitative trait locus on chromosome 19 |
CXORF21 Genechromosome X open reading frame 21 Involved in positive regulation of toll-like receptor 7 signaling pathway; positive regulation of toll-like receptor 8 signaling pathway; and regulation of lysosomal lumen pH. Located in endolysosome membrane and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
CXORF23 Genechromosome X open reading frame 23 Predicted to enable DNA binding activity and transcription coregulator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in mitochondrion. Predicted to be part of mediator complex. [provided by Alliance of Genome Resources, Mar 2025] |
LOC727964 Genechromosome 2 open reading frame 69 pseudogene |
LOC100420864 Genechromosome 11 open reading frame 58 pseudogene |
C16ORF70 Genechromosome 16 open reading frame 70 Predicted to be involved in Golgi to plasma membrane protein transport. Located in phagophore assembly site. [provided by Alliance of Genome Resources, Mar 2025] |
C16ORF71 Genechromosome 16 open reading frame 71 Predicted to enable dynein complex binding activity. Predicted to be involved in outer dynein arm assembly. Located in dynein axonemal particle. [provided by Alliance of Genome Resources, Mar 2025] |
C16ORF72 Genechromosome 16 open reading frame 72 Enables ubiquitin protein ligase binding activity. Involved in negative regulation of signal transduction by p53 class mediator and regulation of cellular response to stress. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C16ORF78 Genechromosome 16 open reading frame 78 Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C14ORF28 Genechromosome 14 open reading frame 28 Predicted to act upstream of or within with a positive effect on NMDA selective glutamate receptor signaling pathway and cAMP-mediated signaling. Predicted to act upstream of or within several processes, including G protein-coupled dopamine receptor signaling pathway; memory; and neurogenesis. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF62 Genechromosome 20 open reading frame 62 |
DUP16P11.2 GeneChromosome 16p11.2 duplication syndrome |
LOC389895 Genechromosome 16 open reading frame 72-like Enables ubiquitin protein ligase binding activity. Involved in protein stabilization. Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF16 Genechromosome 11 open reading frame 16 |
C9ORF172 Genechromosome 9 open reading frame 172 Predicted to be involved in cell-cell junction organization. Predicted to be located in adherens junction; apical plasma membrane; and cilium. Predicted to be active in apical junction complex and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF71 Genechromosome 10 open reading frame 71 Predicted to be involved in positive regulation of calcineurin-NFAT signaling cascade. Predicted to be located in cytoplasm. Predicted to be active in Z disc. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF76 Genechromosome 10 open reading frame 76 Involved in regulation of Golgi organization. Located in Golgi membrane and cytosol. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF163 Genechromosome 9 open reading frame 163 |
C2ORF91 Genechromosome 2 open reading frame 91 |
DEL8Q21.11 GeneChromosome 8q21.11 deletion syndrome |
C5ORF28 Genechromosome 5 open reading frame 28 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF22 Genechromosome 5 open reading frame 22 |
C5ORF24 Genechromosome 5 open reading frame 24 |
C1ORF159 Genechromosome 1 open reading frame 159 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF158 Genechromosome 1 open reading frame 158 Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF2 Genechromosome 10 open reading frame 2 This gene encodes a hexameric DNA helicase which unwinds short stretches of double-stranded DNA in the 5' to 3' direction and, along with mitochondrial single-stranded DNA binding protein and mtDNA polymerase gamma, is thought to play a key role in mtDNA replication. The protein localizes to the mitochondrial matrix and mitochondrial nucleoids. Mutations in this gene cause infantile onset spinocerebellar ataxia (IOSCA) and progressive external ophthalmoplegia (PEO) and are also associated with several mitochondrial depletion syndromes. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, Aug 2009] |
C2ORF66 Genechromosome 2 open reading frame 66 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF18 Genechromosome 3 open reading frame 18 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF14 Genechromosome 3 open reading frame 14 Predicted to be located in cilium. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF17 Genechromosome 3 open reading frame 17 Predicted to be involved in negative regulation of neuron differentiation and positive regulation of Notch signaling pathway. Predicted to be located in nucleolus. Predicted to be active in nucleus. Implicated in anauxetic dysplasia 3. [provided by Alliance of Genome Resources, Mar 2025] |
LOC647996 Genechromosome 9 open reading frame 172 pseudogene |
C1ORF233 Genechromosome 1 open reading frame 233 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
DEL3Q29 GeneChromosome 3q29 microdeletion syndrome |
RCBTB2P1 Generegulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 pseudogene 1 |
DEL9P GeneChromosome 9p deletion syndrome |
LOC100289037 GeneNHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) pseudogene |
C9ORF62 Genechromosome 9 open reading frame 62 |
C9ORF66 Genechromosome 9 open reading frame 66 |
C9ORF64 Genechromosome 9 open reading frame 64 Predicted to enable hydrolase activity. Involved in nucleoside salvage. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF69 Genechromosome 9 open reading frame 69 Predicted to enable GTPase activity and molecular adaptor activity. Involved in positive regulation of cell population proliferation and positive regulation of viral process. Located in cytoplasm and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF60 Genechromosome 12 open reading frame 60 |
C12ORF66 Genechromosome 12 open reading frame 66 Involved in several processes, including cellular response to amino acid starvation; cellular response to glucose starvation; and negative regulation of TORC1 signaling. Located in intercellular bridge and lysosome. Part of KICSTOR complex. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100130170 Genechromosome 12 open reading frame 49 pseudogene |
D6S2723E GeneDNA segment on chromosome 6 (unique, pseudogene) 2723 expressed sequence |
C11ORF98 Genechromosome 11 open reading frame 98 This gene shares three exons in common with another gene, LBH domain containing 1 (GeneID:79081), but the encoded protein uses a reading frame that is different from that of the LBH domain containing 1 gene. [provided by RefSeq, Nov 2017] |
C11ORF97 Genechromosome 11 open reading frame 97 Predicted to be located in ciliary basal body. Predicted to be active in ciliary base. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF96 Genechromosome 11 open reading frame 96 |
C11ORF95 Genechromosome 11 open reading frame 95 Predicted to be involved in negative regulation of DNA-templated transcription. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF94 Genechromosome 11 open reading frame 94 Predicted to enable protein-macromolecule adaptor activity. Predicted to be involved in fusion of sperm to egg plasma membrane involved in single fertilization; maintenance of protein localization in endoplasmic reticulum; and sperm-egg recognition. Predicted to act upstream of or within several processes, including protein modification process; protein stabilization; and spermatid development. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF91 Genechromosome 11 open reading frame 91 |
LOC100420831 Genechromosome 1 open reading frame 106 pseudogene |
C6ORF163 Genechromosome 6 open reading frame 163 |
C6ORF165 Genechromosome 6 open reading frame 165 Predicted to be involved in regulation of cilium beat frequency; regulation of flagellated sperm motility; and sperm axoneme assembly. Predicted to be located in A axonemal microtubule and motile cilium. Predicted to be part of radial spoke. Predicted to be active in axoneme and ciliary basal body. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF16 Genechromosome 2 open reading frame 16 Located in extracellular exosome and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF15 Genechromosome 2 open reading frame 15 Enables RNA binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
DEL2Q32Q33 GeneChromosome 2q32-q33 deletion syndrome |
CECR5 Genecat eye syndrome chromosome region, candidate 5 Predicted to be involved in glycerophospholipid biosynthetic process. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
CECR9 Genecat eye syndrome chromosome region, candidate 9 (non-protein coding) Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C18ORF65 Genechromosome 18 open reading frame 65 |
C18ORF63 Genechromosome 18 open reading frame 63 |
C20ORF173 Genechromosome 20 open reading frame 173 Predicted to enable beta-galactoside (CMP) alpha-2,3-sialyltransferase activity. Predicted to be involved in ganglioside biosynthetic process via lactosylceramide; protein glycosylation; and sialylation. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420911 Genechromosome 14 open reading frame 166 pseudogene |
C7ORF69 Genechromosome 7 open reading frame 69 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF60 Genechromosome 7 open reading frame 60 Enables S-adenosyl-L-methionine binding activity. Involved in cellular response to amino acid starvation; cellular response to methionine; and positive regulation of TORC1 signaling. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF61 Genechromosome 7 open reading frame 61 Involved in spermatid development. Located in acrosomal vesicle. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF62 Genechromosome 7 open reading frame 62 |
C7ORF65 Genechromosome 7 open reading frame 65 |
C7ORF66 Genechromosome 7 open reading frame 66 |
LOC100287427 Genechromosome 18 open reading frame 21 pseudogene |
LOC100287425 Genechromosome 7 open reading frame 73 pseudogene |
DEL1Q41Q42 GeneChromosome 1q41-q42 deletion syndrome |
C6ORF25 Genechromosome 6 open reading frame 25 This gene is a member of the immunoglobulin (Ig) superfamily and is located in the major histocompatibility complex (MHC) class III region. The protein encoded by this gene is a glycosylated, plasma membrane-bound cell surface receptor, but soluble isoforms encoded by some transcript variants have been found in the endoplasmic reticulum and Golgi before being secreted. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
SS18L2P2 Genesynovial sarcoma translocation gene on chromosome 18-like 2 pseudogene 2 |
LOC100420892 Genechromosome 14 open reading frame 166 pseudogene |
C14ORF93 Genechromosome 14 open reading frame 93 Enables RNA binding activity. Predicted to act upstream of or within cell differentiation and positive regulation of gene expression. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF32 Genechromosome 15 open reading frame 32 |
C19ORF35 Genechromosome 19 open reading frame 35 Predicted to enable protein kinase activity. Involved in regulation of actin cytoskeleton organization and regulation of cell shape. Predicted to be active in actin cytoskeleton and focal adhesion. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF44 Genechromosome 11 open reading frame 44 |
C21ORF62 Genechromosome 21 open reading frame 62 Enables identical protein binding activity. Involved in mitocytosis. Located in extracellular exosome and migrasome. [provided by Alliance of Genome Resources, Mar 2025] |
C21ORF2 Genechromosome 21 open reading frame 2 Four alternatively spliced transcript variants encoding four different isoforms have been found for this nuclear gene. All isoforms contain leucine-rich repeats. Three of these isoforms are mitochondrial proteins and one of them lacks the target peptide, so is not located in mitochondrion. This gene is down-regulated in Down syndrome (DS) brain, which may represent mitochondrial dysfunction in DS patients. [provided by RefSeq, Sep 2012] |
LOC100129667 Genechromosome 5 open reading frame 13 pseudogene |
WBSCR27 GeneWilliams Beuren syndrome chromosome region 27 This gene encodes a protein belonging to ubiE/COQ5 methyltransferase family. The gene is deleted in Williams syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.22-q11.23. [provided by RefSeq, Jul 2008] |
WBSCR28 GeneWilliams-Beuren syndrome chromosome region 28 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C22ORF15 Genechromosome 22 open reading frame 15 |
DUP17Q23.1Q23.2 GeneChromosome 17q23.1-q23.2 duplication syndrome |
C8ORF58 Genechromosome 8 open reading frame 58 |
C8ORF59 Genechromosome 8 open reading frame 59 Involved in ribosome biogenesis. Located in cytosol; nucleolus; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF107 Genechromosome 17 open reading frame 107 |
C10ORF126 Genechromosome 10 open reading frame 126 |
C10ORF120 Genechromosome 10 open reading frame 120 |
C10ORF128 Genechromosome 10 open reading frame 128 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF27A Genechromosome 2 open reading frame 27A |
C2ORF27B Genechromosome 2 open reading frame 27B |
C21ORF58 Genechromosome 21 open reading frame 58 |
DEL6Q24Q25 GeneChromosome 6q25-q25 deletion syndrome |
LOC100132977 Genechromosome 2 open reading frame 27B pseudogene |
C16ORF47 Genechromosome 16 open reading frame 47 |
C3ORF70 Genechromosome 3 open reading frame 70 Predicted to be involved in circadian behavior and nervous system development. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF68 Genechromosome 11 open reading frame 68 Enables RNA binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF65 Genechromosome 11 open reading frame 65 Predicted to be involved in negative regulation of mitochondrial fission and negative regulation of protein targeting to mitochondrion. Predicted to be located in cytosol and mitochondrial outer membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF63 Genechromosome 11 open reading frame 63 Predicted to be involved in axoneme assembly and brain development. Predicted to act upstream of or within several processes, including cerebrospinal fluid circulation; motile cilium assembly; and regulation of establishment of planar polarity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF25 Genechromosome 10 open reading frame 25 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF99 Genechromosome 10 open reading frame 99 Enables chemokine activity. Involved in several processes, including defense response to other organism; mast cell degranulation; and negative regulation of cell cycle G1/S phase transition. Located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100127912 Genechromosome 2 open reading frame 27B pseudogene |
SCLL GeneChromosome 8p11 myeloproliferative syndrome |
C9ORF131 Genechromosome 9 open reading frame 131 |
C9ORF135 Genechromosome 9 open reading frame 135 Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF139 Genechromosome 9 open reading frame 139 |
C5ORF17 Genechromosome 5 open reading frame 17 |
C5ORF15 Genechromosome 5 open reading frame 15 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF127 Genechromosome 1 open reading frame 127 Predicted to act upstream of or within determination of left/right symmetry and heart development. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF122 Genechromosome 1 open reading frame 122 |
C1ORF123 Genechromosome 1 open reading frame 123 Enables zinc ion binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF51 Genechromosome 4 open reading frame 51 |
C3ORF49 Genechromosome 3 open reading frame 49 |
C17ORF112 Genechromosome 17 open reading frame 112 |
C12ORF65 Genechromosome 12 open reading frame 65 This nuclear gene encodes a mitochondrial matrix protein that appears to contribute to peptide chain termination in the mitochondrial translation machinery. Two different 1 bp deletions (resulting in the same premature stop codon)result in decreased mitochondrial translation, decreased levels of oxidative phosphorylation complexes and encepthalomyopathy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2010] |
C9ORF50 Genechromosome 9 open reading frame 50 |
C9ORF57 Genechromosome 9 open reading frame 57 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420839 Genechromosome 18 open reading frame 21 pseudogene |
C20ORF196 Genechromosome 20 open reading frame 196 Involved in negative regulation of double-strand break repair via homologous recombination; positive regulation of double-strand break repair via nonhomologous end joining; and positive regulation of isotype switching. Located in site of double-strand break. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF195 Genechromosome 20 open reading frame 195 |
C19ORF84 Genechromosome 19 open reading frame 84 Predicted to be involved in transposable element silencing by piRNA-mediated DNA methylation. Predicted to be located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF80 Genechromosome 19 open reading frame 80 Predicted to enable hormone activity. Involved in regulation of lipid metabolic process and triglyceride homeostasis. Acts upstream of or within positive regulation of protein processing and regulation of lipoprotein metabolic process. Located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF81 Genechromosome 19 open reading frame 81 |
C14ORF37 Genechromosome 14 open reading frame 37 Predicted to enable TORC2 complex binding activity. Involved in regulation of inflammatory response. Located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420683 Genechromosome X open reading frame 67 pseudogene |
LOC100217367 Genechromosome 11 open reading frame 73 pseudogene |
C1ORF43 Genechromosome 1 open reading frame 43 Involved in phagocytosis. Located in Golgi apparatus; cytosol; and mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF57 Genechromosome 20 open reading frame 57 |
C18ORF54 Genechromosome 18 open reading frame 54 Predicted to act upstream of or within negative regulation of cell population proliferation. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100132570 Genechromosome 17 open reading frame 58 pseudogene |
C7ORF13 Genechromosome 7 open reading frame 13 |
C4ORF33 Genechromosome 4 open reading frame 33 |
C12ORF10 Genechromosome 12 open reading frame 10 Enables 3'-5'-RNA exonuclease activity. Involved in mRNA processing; mitochondrial RNA metabolic process; and rRNA processing. Located in mitochondrion and nucleus. Is active in mitochondrial matrix; nucleolus; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF41 Genechromosome 15 open reading frame 41 This gene encodes a protein with two predicted helix-turn-helix domains. Mutations in this gene were found in families with congenital dyserythropoietic anemia type Ib. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2014] |
CECR1 Genecat eye syndrome chromosome region, candidate 1 This gene encodes a member of a subfamily of the adenosine deaminase protein family. The encoded protein is one of two adenosine deaminases found in humans, which regulate levels of the signaling molecule, adenosine. The encoded protein is secreted from monocytes undergoing differentiation and may regulate cell proliferation and differentiation. This gene may be responsible for some of the phenotypic features associated with cat eye syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013] |
CECR2 Genecat eye syndrome chromosome region, candidate 2 This gene encodes a bromodomain-containing protein that is involved in chromatin remodeling, and may additionally play a role in DNA damage response. The encoded protein functions as part of an ATP-dependent complex that is involved in neurulation. This gene is a candidate gene for Cat Eye Syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2014] |
CECR3 Genecat eye syndrome chromosome region, candidate 3 (non-protein coding) |
CECR6 Genecat eye syndrome chromosome region, candidate 6 |
DELXQ28 GeneChromosome Xq28 microdeletion syndrome |
LOC100420738 Genechromosome 9 open reading frame 78 pseudogene |
LOC100131279 Genechromosome 2 open reading frame 69 pseudogene |
RCC1 Generegulator of chromosome condensation 1 Enables several functions, including guanyl-nucleotide exchange factor activity; nucleosomal DNA binding activity; and protein heterodimerization activity. Involved in G1/S transition of mitotic cell cycle; regulation of mitotic nuclear division; and spindle organization. Located in chromatin; cytoplasm; and nuclear lumen. Part of protein-containing complex. [provided by Alliance of Genome Resources, Mar 2025] |
RCC2 Generegulator of chromosome condensation 2 The protein encoded by this gene is a guanine exchange factor that is active on RalA, a small GTPase. The encoded protein and RalA are both essential for proper kinetochore-microtubule function in early mitosis. This protein has been shown to be a biomarker for colorectal cancer. [provided by RefSeq, Oct 2016] |
ASOBS GeneAsthma and obesity susceptibility, chromosome 16p11 inversion related |
C17ORF104 Genechromosome 17 open reading frame 104 Predicted to be involved in several processes, including germ cell development; germline cell cycle switching, mitotic to meiotic cell cycle; and meiosis I. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF105 Genechromosome 17 open reading frame 105 Predicted to be involved in sperm axoneme assembly. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF102 Genechromosome 17 open reading frame 102 |
C17ORF100 Genechromosome 17 open reading frame 100 |
C21ORF59 Genechromosome 21 open reading frame 59 This gene encodes a protein that plays a critical role in dynein arm assembly and motile cilia function. Mutations in this gene result in primary ciliary dyskinesia. Naturally occuring readthrough transcription occurs from this locus to the downstream t-complex 10 like (TCP10L) gene. [provided by RefSeq, Apr 2017] |
C10ORF90 Genechromosome 10 open reading frame 90 Predicted to enable histone deacetylase binding activity; microtubule binding activity; and ubiquitin protein ligase activity. Predicted to be involved in several processes, including protein stabilization; regulation of cell cycle process; and response to ionizing radiation. Located in cytoskeleton; cytosol; and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF91 Genechromosome 10 open reading frame 91 |
C10ORF95 Genechromosome 10 open reading frame 95 |
LOC284269 Genechromosome 9 open reading frame 86 pseudogene 1 |
C22ORF29 Genechromosome 22 open reading frame 29 Involved in mitochondrial outer membrane permeabilization and regulation of mitochondrial membrane potential. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C22ORF23 Genechromosome 22 open reading frame 23 |
C22ORF24 Genechromosome 22 open reading frame 24 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
DUP2Q31.1 GeneChromosome 2q31.1 duplication syndrome |
CXORF49 Genechromosome X open reading frame 49 |
LOC100420966 Genechromosome 17 open reading frame 98 pseudogene |
LOC100420967 Genechromosome 2 open reading frame 27B pseudogene |
C6ORF1 Genechromosome 6 open reading frame 1 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF7 Genechromosome 6 open reading frame 7 |
C14ORF105 Genechromosome 14 open reading frame 105 Predicted to be involved in energy homeostasis. Predicted to be part of cytoplasmic vesicle and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
DEL22Q11.2 GeneChromosome 22q11.2 deletion syndrome, distal |
LOC100502572 Genechromosome 5 open reading frame 60 pseudogene |
DEL13Q14 GeneChromosome 13q14 deletion syndrome |
C1ORF204 Genechromosome 1 open reading frame 204 Enables RNA binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
DUP16P13.3 GeneChromosome 16p13.3 duplication syndrome |
C20ORF85 Genechromosome 20 open reading frame 85 Located in cilium. [provided by Alliance of Genome Resources, Mar 2025] |
DEL6PTER GeneChromosome 6pter deletion syndrome |
C6ORF201 Genechromosome 6 open reading frame 201 |
C17ORF70 Genechromosome 17 open reading frame 70 FAAP100 is a component of the Fanconi anemia (FA; MIM 277650) core complex and is required for core complex stability and FANCD2 (see MIM 227646) monoubiquitination (Ling et al., 2007 [PubMed 17396147]).[supplied by OMIM, Mar 2008] |
C17ORF77 Genechromosome 17 open reading frame 77 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF75 Genechromosome 17 open reading frame 75 Involved in intracellular protein transport and vesicle tethering to Golgi. Located in cytoplasmic vesicle; cytosol; and trans-Golgi network. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF74 Genechromosome 17 open reading frame 74 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF78 Genechromosome 17 open reading frame 78 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
SS18L2 Genesynovial sarcoma translocation gene on chromosome 18-like 2 Synovial sarcomas occur most frequently in the extremities around large joints. More than 90% of cases have a recurrent and specific chromosomal translocation, t(X;18)(p11.2;q11.2), in which the 5-prime end of the SS18 gene (MIM 600192) is fused in-frame to the 3-prime end of the SSX1 (MIM 312820), SSX2 (MIM 300192), or SSX4 (MIM 300326) gene. The SS18L2 gene is homologous to SS18.[supplied by OMIM, Jul 2002] |
SS18L1 Genesynovial sarcoma translocation gene on chromosome 18-like 1 This gene encodes a calcium-responsive transactivator which is an essential subunit of a neuron-specific chromatin-remodeling complex. The structure of this gene is similar to that of the SS18 gene. Mutations in this gene are involved in amyotrophic lateral sclerosis (ALS). Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Sep 2014] |
C10ORF10 Genechromosome 10 open reading frame 10 The expression of this gene is induced by fasting as well as by progesterone. The protein encoded by this gene contains a t-synaptosome-associated protein receptor (SNARE) coiled-coil homology domain and a peroxisomal targeting signal. Production of the encoded protein leads to phosphorylation and activation of the transcription factor ELK1. [provided by RefSeq, Jul 2008] |
C10ORF11 Genechromosome 10 open reading frame 11 This gene encodes a leucine-rich repeat protein. The encoded protein is thought to play a role in melanocyte differentiation. Mutations in this gene have been associated with autosomal recessive oculocutaneous albinism 7 (OCA7). Alternatively spliced transcript variants have been identified. [provided by RefSeq, Mar 2015] |
C10ORF12 Genechromosome 10 open reading frame 12 |
C8ORF49 Genechromosome 8 open reading frame 49 |
DUPXQ28 GeneChromosome Xq28 duplication syndrome |
C9ORF106 Genechromosome 9 open reading frame 106 |
C5ORF49 Genechromosome 5 open reading frame 49 Predicted to be involved in flagellated sperm motility. Located in axoneme and ciliary basal body. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF45 Genechromosome 5 open reading frame 45 Enables chromatin binding activity. Involved in several processes, including mitotic G2 DNA damage checkpoint signaling; regulation of double-strand break repair; and response to ionizing radiation. Located in Mre11 complex and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF46 Genechromosome 5 open reading frame 46 Located in extracellular exosome. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF47 Genechromosome 5 open reading frame 47 |
C5ORF42 Genechromosome 5 open reading frame 42 The protein encoded by this gene has putative coiled-coil domains and may be a transmembrane protein. Defects in this gene are a cause of Joubert syndrome (JBTS). [provided by RefSeq, May 2012] |
LOC105377772 Genechromosome alignment-maintaining phosphoprotein 1-like |
DEL2P12P11.2 GeneChromosome 2p12-p11.2 deletion syndrome |
C8ORF22 Genechromosome 8 open reading frame 22 Predicted to be involved in cell differentiation. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF29 Genechromosome 4 open reading frame 29 Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF22 Genechromosome 4 open reading frame 22 Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF27 Genechromosome 4 open reading frame 27 Enables chromatin binding activity; histone binding activity; and protein ADP-ribosyltransferase-substrate adaptor activity. Involved in DNA repair-dependent chromatin remodeling and double-strand break repair. Located in chromatin and nucleus. Is active in site of DNA damage. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF26 Genechromosome 4 open reading frame 26 Dental enamel forms the outer cap of teeth and is the hardest substance found in vertebrates. This gene is thought to encode an extracellular matrix acidic phosphoprotein that has a function in enamel mineralization during amelogenesis. Mutations in this gene are associated with recessive hypomineralized amelogenesis imperfecta. [provided by RefSeq, Oct 2012] |
DGCR GeneDiGeorge syndrome chromosome region DiGeorge syndrome (DGS) comprises hypocalcemia arising from parathyroid hypoplasia, thymic hypoplasia, and outflow tract defects of the heart. Disturbance of cervical neural crest migration into the derivatives of the pharyngeal arches and pouches can account for the phenotype. Most cases result from a deletion of chromosome 22q11.2 (the DiGeorge syndrome chromosome region, or DGCR). Several genes are lost including the putative transcription factor TUPLE1 which is expressed in the appropriate distribution. This deletion may present with a variety of phenotypes: Shprintzen, or velocardiofacial, syndrome (VCFS; MIM 192430); conotruncal anomaly face (or Takao syndrome); and isolated outflow tract defects of the heart including tetralogy of Fallot, truncus arteriosus, and interrupted aortic arch. A collective acronym CATCH22 has been proposed for these differing presentations. A small number of cases of DGS have defects in other chromosomes, notably 10p13 (see MIM 601362). In the mouse, a transgenic Hox A3 (Hox 1.5) knockout produces a phenotype similar to DGS as do the teratogens retinoic acid and alcohol.[supplied by OMIM, Aug 2009] |
C14ORF180 Genechromosome 14 open reading frame 180 Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100887076 Genechromosome 9 open reading frame 172 pseudogene |
ANCR GeneAngelman syndrome chromosome region Angelman syndrome (AS) is characterized by developmental delay, intellectual disability, movement or balance disorders, seizures, and limitations in speech and language development. Most cases of AS are caused by deletion in the 15q11-q13 region of the maternal chromosome. Prader-Willi syndrome (PWS) is a clinically distinct disorder resulting from paternal deletion of the 15q11-q13 region. Clinical features similar to AS are also shown in chromosome 15q11-q13 duplication syndrome. [provided by RefSeq, Jul 2017] |
DEL2Q31 GeneChromosome 2q31.2 deletion syndrome |
C16ORF45 Genechromosome 16 open reading frame 45 Predicted to be involved in negative regulation of microtubule depolymerization. Predicted to act upstream of or within negative regulation of cell motility involved in cerebral cortex radial glia guided migration. Predicted to be active in microtubule cytoskeleton. [provided by Alliance of Genome Resources, Mar 2025] |
LOC646408 Genechromosome 9 open reading frame 16 pseudogene |
C16ORF58 Genechromosome 16 open reading frame 58 This gene encodes a putative transmembrane protein containing a conserved DUF647 domain that may be involved in protein-protein interaction. The encoded protein is related to a plant protein that participates in ultraviolet B light-sensing during root morphogenesis. [provided by RefSeq, Feb 2013] |
C16ORF59 Genechromosome 16 open reading frame 59 Predicted to be involved in positive regulation of smoothened signaling pathway. Predicted to be located in centriole and cilium. [provided by Alliance of Genome Resources, Mar 2025] |
C16ORF52 Genechromosome 16 open reading frame 52 Predicted to be involved in negative regulation of smoothened signaling pathway; regulation of neuron differentiation; and regulation of protein stability. Predicted to act upstream of or within several processes, including chordate embryonic development; embryonic limb morphogenesis; and smoothened signaling pathway. Predicted to be located in plasma membrane. Predicted to be active in Golgi apparatus and ciliary membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C16ORF54 Genechromosome 16 open reading frame 54 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
DEL16P12.1P11.2 GeneChromosome 16p12.2-p11.2 deletion syndrome |
C2ORF82 Genechromosome 2 open reading frame 82 Predicted to be involved in cartilage development. Predicted to be located in several cellular components, including collagen-containing extracellular matrix; cytoplasm; and extracellular region. Predicted to be active in cell periphery. [provided by Alliance of Genome Resources, Mar 2025] |
CHTF8 GeneCTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) This gene encodes a short protein that forms part of the Ctf18 replication factor C (RFC) complex that occurs in both yeast and mammals. The heteroheptameric RFC complex plays a role in sister chromatid cohesion and may load the replication clamp PCNA (proliferating cell nuclear antigen) onto DNA during DNA replication and repair. This gene is ubiquitously expressed and has been shown to have reduced expression in renal and prostate tumors. Alternatively spliced transcript variants have been described. This gene has a pseudogene on chromosome X. [provided by RefSeq, Oct 2018] |
C11ORF31 Genechromosome 11 open reading frame 31 This gene encodes a nucleolar protein, which belongs to the SelWTH family. It functions as an oxidoreductase, and has been shown to protect neurons against UVB-induced damage by inhibiting apoptotic cell death pathways, promote mitochondrial biogenesis and mitochondrial function, and suppress cellular senescence through genome maintenance and redox regulation. This protein is a selenoprotein, containing the rare amino acid selenocysteine (Sec) at its active site. Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, May 2016] |
DEL2P16.1-P15 GeneChromosome 2p16.1-p15 deletion syndrome |
WBSCR17 GeneWilliams-Beuren syndrome chromosome region 17 This gene encodes an N-acetylgalactosaminyltransferase. This gene is located centromeric to the common deleted region in Williams-Beuren syndrome (WBS), a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.23. This protein may play a role in membrane trafficking. [provided by RefSeq, Jan 2013] |
C5ORF34 Genechromosome 5 open reading frame 34 |
C1ORF147 Genechromosome 1 open reading frame 147 |
LOC100506911 Genechromosome 6 open reading frame 35 pseudogene |
LOC642614 Genechromosome 2 open reading frame 69 pseudogene |
DEL6Q11Q14 GeneChromosome 6q11-q14 deletion syndrome |
C6ORF183 Genechromosome 6 open reading frame 183 |
C11ORF1 Genechromosome 11 open reading frame 1 Predicted to be involved in flagellated sperm motility. Located in axoneme and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
ALS2CR11 Geneamyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 An autosomal recessive form of juvenile amyotrophic lateral sclerosis was originally mapped to a region of chromosome 2 that includes this gene. The encoded protein contains a calcium-dependent membrane targeting C2 domain. This domain is often found in proteins that are involved in membrane trafficking and signal transduction. [provided by RefSeq, Jun 2016] |
ALS2CR12 Geneamyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 Predicted to be located in cytoplasmic vesicle and outer dense fiber. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF174 Genechromosome 1 open reading frame 174 Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF177 Genechromosome 1 open reading frame 177 |
C1ORF35 Genechromosome 1 open reading frame 35 Enables RNA binding activity. Predicted to be located in extracellular region; ficolin-1-rich granule lumen; and secretory granule lumen. [provided by Alliance of Genome Resources, Mar 2025] |
DUP22Q11.2 GeneChromosome 22q11.2 microduplication syndrome |
LOC100289470 Genechromosome 5 open reading frame 60 pseudogene |
LOC101241901 Genechromosome 4 open reading frame 46 pseudogene |
C9ORF89 Genechromosome 9 open reading frame 89 Predicted to enable CARD domain binding activity. Predicted to be involved in negative regulation of canonical NF-kappaB signal transduction. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF84 Genechromosome 9 open reading frame 84 Enables ATP hydrolysis activity and single-stranded DNA binding activity. Predicted to be involved in resolution of meiotic recombination intermediates and synaptonemal complex assembly. Predicted to be located in chromosome. Predicted to be active in condensed nuclear chromosome. Implicated in spermatogenic failure 75. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF85 Genechromosome 9 open reading frame 85 |
C1ORF68 Genechromosome 1 open reading frame 68 Predicted to be involved in epidermis development. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF89 Genechromosome 6 open reading frame 89 Involved in several processes, including chromatin remodeling; epithelial cell proliferation; and wound healing. Located in several cellular components, including Golgi membrane; midbody; and nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF49 Genechromosome 12 open reading frame 49 Involved in positive regulation of SREBP signaling pathway. Located in Golgi membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF40 Genechromosome 12 open reading frame 40 Predicted to enable DNA binding activity and RNA binding activity. Predicted to be involved in meiotic cell cycle. Predicted to be located in chromosome. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF43 Genechromosome 12 open reading frame 43 Predicted to be involved in Spemann organizer formation and negative regulation of Wnt signaling pathway. Predicted to be located in nuclear envelope. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF42 Genechromosome 12 open reading frame 42 |
C12ORF45 Genechromosome 12 open reading frame 45 Enables box C/D methylation guide snoRNP complex binding activity. Involved in box C/D snoRNP assembly. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100132615 Genechromosome 12 open reading frame 49 pseudogene |
C19ORF53 Genechromosome 19 open reading frame 53 |
C19ORF52 Genechromosome 19 open reading frame 52 Enables protein transporter activity. Involved in protein insertion into mitochondrial inner membrane. Located in mitochondrial inner membrane and mitochondrial intermembrane space. Part of TIM22 mitochondrial import inner membrane insertion complex. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF57 Genechromosome 19 open reading frame 57 Predicted to enable damaged DNA binding activity. Predicted to be involved in meiosis I; protein localization to site of double-strand break; and spermatogenesis. Predicted to be located in chromosome. Predicted to be active in site of double-strand break. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF54 Genechromosome 19 open reading frame 54 Enables cysteine-type aminopeptidase activity and initiator methionyl aminopeptidase activity. Involved in protein processing. Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF106 Genechromosome 6 open reading frame 106 This gene encodes a protein with N-terminal ubiquitin-associated (UBA)-like and central neighbor of BRCA1 gene 1 (NBR1)-like domains. The protein acts an inhibitor of antiviral and proinflammatory cytokine transcription and as a regulator of the renin-angiotensin-aldosterone system (RAAS). [provided by RefSeq, Jul 2021] |
DUP7Q11.23 GeneChromosome 7q11.23 duplication syndrome |
C20ORF194 Genechromosome 20 open reading frame 194 This gene encodes an uncharacterized protein with a C-terminal coiled-coil region. The gene is located on chromosome 20p13 in a 1.8 Mb region linked to a spinocerebellar ataxia phenotype, but this gene does not appear to be a disease candidate. [provided by RefSeq, Dec 2011] |
C19ORF71 Genechromosome 19 open reading frame 71 Predicted to be involved in flagellated sperm motility. Predicted to be located in axonemal microtubule. Predicted to be active in axonemal A tubule inner sheath and sperm flagellum. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF70 Genechromosome 2 open reading frame 70 Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF71 Genechromosome 2 open reading frame 71 The protein encoded by this gene is highly expressed in photoreceptors and may associate with the primary cilium of the outer segment. The encoded protein appears to undergo post-translational lipid modification. Nonsense and missense variants of this gene appear to cause a recessive form of retinitis pigmentosa. [provided by RefSeq, Jun 2010] |
C2ORF73 Genechromosome 2 open reading frame 73 |
C2ORF76 Genechromosome 2 open reading frame 76 |
C2ORF78 Genechromosome 2 open reading frame 78 |
C6ORF120 Genechromosome 6 open reading frame 120 This gene encodes a conserved, N-glycosylated protein that likely functions in the cellular response to endoplasmic reticulum stress. This protein is able to induce apoptosis in vitro in CD4+ T-cells. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2015] |
C21ORF140 Genechromosome 21 open reading frame 140 |
C7ORF49 Genechromosome 7 open reading frame 49 Predicted to enable molecular adaptor activity. Involved in double-strand break repair via nonhomologous end joining and negative regulation of double-strand break repair via nonhomologous end joining. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C14ORF159 Genechromosome 14 open reading frame 159 Predicted to enable D-glutamate cyclase activity. Predicted to be involved in glutamate metabolic process. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
SS18L2P1 Genesynovial sarcoma translocation gene on chromosome 18-like 2 pseudogene 1 |
DEL16P13.3 GeneChromosome 16p13.3 deletion syndrome |
LOC100420743 Genechromosome 6 open reading frame 58 pseudogene |
C17ORF89 Genechromosome 17 open reading frame 89 Involved in mitochondrial respiratory chain complex I assembly. Located in mitochondrial matrix. Implicated in nuclear type mitochondrial complex I deficiency 34. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF82 Genechromosome 17 open reading frame 82 |
C17ORF80 Genechromosome 17 open reading frame 80 Predicted to be involved in cell population proliferation; mitochondrial DNA metabolic process; and positive regulation of mitochondrial DNA replication. Located in mitochondrial nucleoid. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF85 Genechromosome 17 open reading frame 85 Enables RNA 7-methylguanosine cap binding activity and mRNA binding activity. Involved in defense response to virus; mRNA export from nucleus; and snRNA export from nucleus. Located in cytoplasm and nuclear speck. Part of nuclear cap binding activity complex. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF59 Genechromosome 15 open reading frame 59 Predicted to be involved in inhibitory postsynaptic potential. Predicted to be located in synapse. Predicted to be active in GABA-ergic synapse and postsynaptic density. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF57 Genechromosome 15 open reading frame 57 Involved in head development and regulation of clathrin-dependent endocytosis. Part of clathrin-coated pit. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF56 Genechromosome 15 open reading frame 56 |
C15ORF54 Genechromosome 15 open reading frame 54 |
C15ORF53 Genechromosome 15 open reading frame 53 |
C15ORF52 Genechromosome 15 open reading frame 52 Enables RNA binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
LOC647503 GeneNHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) pseudogene |
TSG11 GeneTumor suppressor gene on chromosome 11 |
DEL17Q23.1Q23.2 GeneChromosome 17q23.1-q23.2 deletion syndrome |
DEL1P32P31 GeneChromosome 1p32-p31 deletion syndrome |
C8ORF76 Genechromosome 8 open reading frame 76 |
C8ORF74 Genechromosome 8 open reading frame 74 |
C16ORF86 Genechromosome 16 open reading frame 86 |
C10ORF142 Genechromosome 10 open reading frame 142 |
DUPXQ27.3Q28 GeneChromosome Xq27.3-q28 duplication syndrome |
DEL14Q11Q22 GeneChromosome 14q11-q22 deletion syndrome |
C8ORF4 Genechromosome 8 open reading frame 4 This gene encodes a small, monomeric, predominantly unstructured protein that functions as a positive regulator of the Wnt/beta-catenin signaling pathway. This protein interacts with a repressor of beta-catenin mediated transcription at nuclear speckles. It is thought to competitively block interactions of the repressor with beta-catenin, resulting in up-regulation of beta-catenin target genes. The encoded protein may also play a role in the NF-kappaB and ERK1/2 signaling pathways. Expression of this gene may play a role in the proliferation of several types of cancer including thyroid cancer, breast cancer and hematological malignancies. [provided by RefSeq, Nov 2011] |
LOC100420879 Genechromosome 2 open reading frame 27B pseudogene |
ASPSCR1 Genealveolar soft part sarcoma chromosome region, candidate 1 The protein encoded by this gene contains a UBX domain and interacts with glucose transporter type 4 (GLUT4). This protein is a tether, which sequesters the GLUT4 in intracellular vesicles in muscle and fat cells in the absence of insulin, and redistributes the GLUT4 to the plasma membrane within minutes of insulin stimulation. Translocation t(X;17)(p11;q25) of this gene with transcription factor TFE3 gene results in a ASPSCR1-TFE3 fusion protein in alveolar soft part sarcoma and in renal cell carcinomas. Multiple alternatively spliced transcript variants have been found. [provided by RefSeq, Oct 2011] |
C14ORF39 Genechromosome 14 open reading frame 39 Involved in homologous chromosome pairing at meiosis. Predicted to be located in chromosome. Predicted to be active in central element. Implicated in primary ovarian insufficiency 18 and spermatogenic failure 52. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100129574 Genechromosome 12 open reading frame 29 pseudogene |
DUP17P13.3 GeneChromosome 17p13.3 duplication syndrome |
LOC642669 Genechromosome 2 open reading frame 27A pseudogene |
C1ORF21 Genechromosome 1 open reading frame 21 |
C12ORF73 Genechromosome 12 open reading frame 73 Involved in mitochondrial cytochrome c oxidase assembly and mitochondrial respiratory chain complex III assembly. Located in mitochondrion. Is active in mitochondrial inner membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C12ORF76 Genechromosome 12 open reading frame 76 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF203 Genechromosome 6 open reading frame 203 Enables ribosomal large subunit binding activity and tRNA binding activity. Involved in regulation of mitochondrial transcription and rescue of stalled ribosome. Located in mitochondrial matrix. [provided by Alliance of Genome Resources, Mar 2025] |
LOC644525 Genechromosome 2 open reading frame 27A pseudogene |
SMCR8 GeneSmith-Magenis syndrome chromosome region, candidate 8 Enables GTPase activator activity; protein kinase binding activity; and protein kinase inhibitor activity. Contributes to guanyl-nucleotide exchange factor activity. Involved in negative regulation of gene expression; regulation of TOR signaling; and regulation of macroautophagy. Located in Atg1/ULK1 kinase complex; chromatin; and nucleoplasm. Part of guanyl-nucleotide exchange factor complex. [provided by Alliance of Genome Resources, Mar 2025] |
SMCR2 GeneSmith-Magenis syndrome chromosome region, candidate 2 (non-protein coding) |
SMCR5 GeneSmith-Magenis syndrome chromosome region, candidate 5 (non-protein coding) |
SMCR6 GeneSmith-Magenis syndrome chromosome region, candidate 6 (non-protein coding) |
C9ORF156 Genechromosome 9 open reading frame 156 Enables tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity. Involved in tRNA methylation. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100301521 Genechromosome 15 open reading frame 40 pseudogene |
C9ORF153 Genechromosome 9 open reading frame 153 |
C9ORF152 Genechromosome 9 open reading frame 152 |
LOC100652967 Genechromosome 14 open reading frame 2 pseudogene |
C2ORF80 Genechromosome 2 open reading frame 80 |
C2ORF88 Genechromosome 2 open reading frame 88 Predicted to enable protein kinase A regulatory subunit binding activity. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF38 Genechromosome 5 open reading frame 38 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF30 Genechromosome 5 open reading frame 30 This gene, MACIR (previously known as C5orf30), has been associated with rheumatoid arthritis, functioning as a negative regulator of tissue damage and modulating the activity of synovial fibroblasts and macrophages. The encoded protein is highly conserved in vertebrate genomes but has no significant similarity to any other human protein. [provided by RefSeq, Dec 2019] |
C1ORF145 Genechromosome 1 open reading frame 145 |
C1ORF146 Genechromosome 1 open reading frame 146 Predicted to be involved in reciprocal meiotic recombination and synaptonemal complex assembly. Predicted to be active in chromosome. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF141 Genechromosome 1 open reading frame 141 |
C1ORF143 Genechromosome 1 open reading frame 143 |
C3ORF22 Genechromosome 3 open reading frame 22 |
CXORF51B Genechromosome X open reading frame 51B |
CXORF51A Genechromosome X open reading frame 51A |
RCC2P1 Generegulator of chromosome condensation 2 pseudogene 1 |
RCC2P2 Generegulator of chromosome condensation 2 pseudogene 2 |
RCC2P3 Generegulator of chromosome condensation 2 pseudogene 3 |
RCC2P4 Generegulator of chromosome condensation 2 pseudogene 4 |
RCC2P5 Generegulator of chromosome condensation 2 pseudogene 5 |
RCC2P6 Generegulator of chromosome condensation 2 pseudogene 6 |
RCC2P7 Generegulator of chromosome condensation 2 pseudogene 7 |
RCC2P8 Generegulator of chromosome condensation 2 pseudogene 8 |
C9ORF72 Genechromosome 9 open reading frame 72 The protein encoded by this gene plays an important role in the regulation of endosomal trafficking, and has been shown to interact with Rab proteins that are involved in autophagy and endocytic transport. Expansion of a GGGGCC repeat from 2-22 copies to 700-1600 copies in the intronic sequence between alternate 5' exons in transcripts from this gene is associated with 9p-linked ALS (amyotrophic lateral sclerosis) and FTD (frontotemporal dementia) (PMID: 21944778, 21944779). Studies suggest that hexanucleotide expansions could result in the selective stabilization of repeat-containing pre-mRNA, and the accumulation of insoluble dipeptide repeat protein aggregates that could be pathogenic in FTD-ALS patients (PMID: 23393093). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2016] |
C16ORF89 Genechromosome 16 open reading frame 89 This gene is expressed predominantly in the thyroid. Based on expression patterns similar to thyroid transcription factors and proteins, this gene may function in the development and function of the thyroid. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011] |
C16ORF82 Genechromosome 16 open reading frame 82 |
C11ORF88 Genechromosome 11 open reading frame 88 Predicted to be involved in axoneme assembly; flagellated sperm motility; and spermatogenesis. Predicted to be located in cilium and cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF87 Genechromosome 11 open reading frame 87 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
CSE1L GeneCSE1 chromosome segregation 1-like (yeast) Proteins that carry a nuclear localization signal (NLS) are transported into the nucleus by the importin-alpha/beta heterodimer. Importin-alpha binds the NLS, while importin-beta mediates translocation through the nuclear pore complex. After translocation, RanGTP binds importin-beta and displaces importin-alpha. Importin-alpha must then be returned to the cytoplasm, leaving the NLS protein behind. The protein encoded by this gene binds strongly to NLS-free importin-alpha, and this binding is released in the cytoplasm by the combined action of RANBP1 and RANGAP1. In addition, the encoded protein may play a role both in apoptosis and in cell proliferation. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2012] |
CECR7 Genecat eye syndrome chromosome region, candidate 7 (non-protein coding) |
C3ORF79 Genechromosome 3 open reading frame 79 |
C12ORF71 Genechromosome 12 open reading frame 71 |
C12ORF74 Genechromosome 12 open reading frame 74 |
C12ORF75 Genechromosome 12 open reading frame 75 |
C12ORF77 Genechromosome 12 open reading frame 77 |
C12ORF79 Genechromosome 12 open reading frame 79 |
C11ORF84 Genechromosome 11 open reading frame 84 Involved in DNA damage response and negative regulation of DNA-templated transcription. Is active in nucleus and site of DNA damage. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF85 Genechromosome 11 open reading frame 85 Predicted to enable DNA binding activity. Predicted to be involved in homologous chromosome pairing at meiosis and meiotic attachment of telomere to nuclear envelope. Predicted to act upstream of or within double-strand break repair involved in meiotic recombination; oogenesis; and spermatogenesis. Predicted to be located in chromosome, telomeric region. Predicted to be active in nuclear inner membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF86 Genechromosome 11 open reading frame 86 |
C11ORF80 Genechromosome 11 open reading frame 80 Predicted to be involved in meiotic DNA double-strand break formation and reciprocal meiotic recombination. Predicted to be located in chromosome. Implicated in gestational trophoblastic neoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF72 Genechromosome 11 open reading frame 72 |
C19ORF33 Genechromosome 19 open reading frame 33 The protein encoded by this gene has been shown to be upregulated in SV40-immortalized fibroblasts as well as in endometrial carcinoma cells. The encoded protein is found primarily in the nucleus. This protein may play a role in placental development and diseases such as pre-eclampsia. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2015] |
C19ORF38 Genechromosome 19 open reading frame 38 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF67 Genechromosome 19 open reading frame 67 Predicted to act upstream of or within in utero embryonic development. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF61 Genechromosome 1 open reading frame 61 Involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF64 Genechromosome 1 open reading frame 64 Enables nuclear estrogen receptor binding activity. Involved in positive regulation of intracellular estrogen receptor signaling pathway. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
DELXP11.3 GeneChromosome Xp11.3 deletion syndrome |
C7ORF73 Genechromosome 7 open reading frame 73 Involved in mitochondrial cytochrome c oxidase assembly. Located in mitochondrion. Is active in mitochondrial inner membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF72 Genechromosome 7 open reading frame 72 Predicted to be involved in spermatogenesis. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF71 Genechromosome 7 open reading frame 71 |
C10ORF55 Genechromosome 10 open reading frame 55 Enables identical protein binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
IGHDOR15@ Geneimmunoglobulin heavy diversity orphans on chromosome 15 |
CHTF18 GeneCTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) This gene encodes a protein which is a component of a replication factor C (RFC) complex, which loads proliferating cell nuclear antigen (PCNA) on to DNA during the S phase of cell cycle. The encoded protein may interact with other proteins, including RFC complex 3, to form a clamp loader complex that plays a role in sister chromatid cohesion during metaphase-anaphase transition. [provided by RefSeq, Jan 2016] |
ADIPQTL3 GeneCirculating adiponectin QTL on chromosome 14 |
C6ORF52 Genechromosome 6 open reading frame 52 Predicted to enable tRNA binding activity. Predicted to be involved in selenocysteine incorporation. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF58 Genechromosome 6 open reading frame 58 Located in extracellular space. [provided by Alliance of Genome Resources, Mar 2025] |
DUP17Q12 GeneChromosome 17q12 duplication syndrome |
LOC391636 Genechromosome 9 open reading frame 78 pseudogene |
C15ORF26 Genechromosome 15 open reading frame 26 Predicted to be involved in cilium assembly and flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF27 Genechromosome 15 open reading frame 27 Enables protein homodimerization activity. Predicted to be involved in transmembrane transport. Located in cytosol; dendrite; and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF26 Genechromosome 19 open reading frame 26 Predicted to enable transmembrane transporter binding activity. Predicted to be involved in negative regulation of calcium ion-dependent exocytosis and negative regulation of voltage-gated calcium channel activity. Predicted to be located in growth cone and secretory granule. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF24 Genechromosome 19 open reading frame 24 Located in cytoplasm and extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF25 Genechromosome 19 open reading frame 25 |
LOC647086 Genechromosome 20 open reading frame 27 pseudogene |
LOC100129996 Genechromosome 6 open reading frame 203 pseudogene |
SS18 Genesynovial sarcoma translocation, chromosome 18 Enables nuclear receptor coactivator activity. Involved in positive regulation of transcription by RNA polymerase II. Part of SWI/SNF complex. Implicated in synovial sarcoma. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF198 Genechromosome 1 open reading frame 198 Located in cytosol. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF196 Genechromosome 1 open reading frame 196 |
C1ORF195 Genechromosome 1 open reading frame 195 |
C1ORF194 Genechromosome 1 open reading frame 194 Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
CXORF65 Genechromosome X open reading frame 65 Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to act upstream of or within transcription by RNA polymerase II. [provided by Alliance of Genome Resources, Mar 2025] |
CXORF67 Genechromosome X open reading frame 67 Enables histone methyltransferase inhibitor activity. Involved in epigenetic regulation of gene expression. Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
CXORF66 Genechromosome X open reading frame 66 The protein encoded by this gene is predicted to be a type I membrane protein, however, its exact function is not known. [provided by RefSeq, Sep 2009] |
C8ORF48 Genechromosome 8 open reading frame 48 |
C8ORF46 Genechromosome 8 open reading frame 46 Predicted to be involved in neuron differentiation. Predicted to be located in nucleus and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C8ORF44 Genechromosome 8 open reading frame 44 |
C10ORF113 Genechromosome 10 open reading frame 113 |
C10ORF111 Genechromosome 10 open reading frame 111 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF226 Genechromosome 1 open reading frame 226 |
C1ORF228 Genechromosome 1 open reading frame 228 |
LOC100505524 Genechromosome 5 open reading frame 63 pseudogene |
LOC729141 Genechromosome 18 open reading frame 25 pseudogene |
C9ORF3 Genechromosome 9 open reading frame 3 This gene encodes a member of the M1 zinc aminopeptidase family. The encoded protein is a zinc-dependent metallopeptidase that catalyzes the removal of an amino acid from the amino terminus of a protein or peptide. This protein may play a role in the generation of angiotensin IV. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2010] |
C9ORF9 Genechromosome 9 open reading frame 9 Enables microtubule binding activity. Involved in axoneme assembly. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF59 Genechromosome 17 open reading frame 59 Enables identical protein binding activity. Involved in lysosome localization. Part of BORC complex. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF58 Genechromosome 17 open reading frame 58 Located in collagen-containing extracellular matrix. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF51 Genechromosome 17 open reading frame 51 |
C17ORF53 Genechromosome 17 open reading frame 53 Predicted to enable single-stranded DNA binding activity. Involved in DNA synthesis involved in DNA repair and interstrand cross-link repair. Located in site of DNA damage. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF58 Genechromosome 11 open reading frame 58 |
C11ORF53 Genechromosome 11 open reading frame 53 Enables sequence-specific DNA binding activity and transcription coactivator activity. Predicted to be involved in positive regulation of DNA-templated transcription. Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF52 Genechromosome 11 open reading frame 52 Located in extracellular exosome. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF57 Genechromosome 11 open reading frame 57 Enables identical protein binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF54 Genechromosome 11 open reading frame 54 Enables hydrolase activity, acting on ester bonds and zinc ion binding activity. Located in nuclear body. [provided by Alliance of Genome Resources, Mar 2025] |
WBSCR22 GeneWilliams Beuren syndrome chromosome region 22 This gene encodes a protein containing a nuclear localization signal and an S-adenosyl-L-methionine binding motif typical of methyltransferases, suggesting that the encoded protein may act on DNA methylation. This gene is deleted in Williams syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.23. Alternatively spliced transcript variants have been found. [provided by RefSeq, Feb 2011] |
C10ORF35 Genechromosome 10 open reading frame 35 Predicted to be located in membrane. Predicted to be active in intracellular membrane-bounded organelle. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF32 Genechromosome 10 open reading frame 32 Predicted to be involved in organelle transport along microtubule; regulation of endosome size; and regulation of lysosome size. Predicted to act upstream of or within several processes, including lysosome localization; motor behavior; and response to cycloheximide. Part of BORC complex. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF132 Genechromosome 1 open reading frame 132 Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex. [provided by Alliance of Genome Resources, Mar 2025] |
DUP3Q29 Genechromosome 3q29 microduplication syndrome |
C9ORF129 Genechromosome 9 open reading frame 129 |
DUPXP11.23P11.22 GeneChromosome Xp11.23-p11.22 duplication syndrome |
C20ORF187 Genechromosome 20 open reading frame 187 |
C20ORF181 Genechromosome 20 open reading frame 181 |
C5ORF66 Genechromosome 5 open reading frame 66 |
C5ORF67 Genechromosome 5 open reading frame 67 |
C5ORF64 Genechromosome 5 open reading frame 64 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF63 Genechromosome 5 open reading frame 63 Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C5ORF60 Genechromosome 5 open reading frame 60 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC728024 Genechromosome X open reading frame 56 pseudogene |
C1ORF112 Genechromosome 1 open reading frame 112 Enables protein kinase binding activity. Involved in several processes, including chromosome segregation; interstrand cross-link repair; and regulation of protein kinase activity. Located in several cellular components, including kinetochore; midbody; and spindle midzone. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF111 Genechromosome 1 open reading frame 111 Predicted to be involved in fusion of sperm to egg plasma membrane involved in single fertilization and spermatogenesis. Predicted to be located in membrane and nucleus. Predicted to be active in nuclear membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF110 Genechromosome 1 open reading frame 110 |
C1ORF116 Genechromosome 1 open reading frame 116 Located in cytosol and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF115 Genechromosome 1 open reading frame 115 Involved in regulation of response to drug. Located in 9+0 non-motile cilium. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF47 Genechromosome 4 open reading frame 47 Located in 9+0 non-motile cilium; centrosome; and cytoplasmic microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF46 Genechromosome 4 open reading frame 46 This gene encodes a small, conserved protein of unknown function that is expressed in a variety of tissues. There are pseudogenes for this gene on chromosomes 6, 8, 16, and X. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2013] |
C4ORF45 Genechromosome 4 open reading frame 45 |
C4ORF48 Genechromosome 4 open reading frame 48 Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in 3'-UTR-mediated mRNA stabilization and spermatogenesis. Predicted to be located in perinuclear region of cytoplasm. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF58 Genechromosome 3 open reading frame 58 Involved in several processes, including cardiac muscle cell proliferation; negative regulation of smooth muscle cell apoptotic process; and positive regulation of protein kinase C activity. Located in Golgi membrane and extracellular space. Part of COPI vesicle coat. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF52 Genechromosome 3 open reading frame 52 Located in plasma membrane. Implicated in hypotrichosis 15. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF56 Genechromosome 3 open reading frame 56 |
RCBTB2 Generegulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 This gene encodes a protein containing two C-terminal BTB/POZ domains that is related to regulator of chromosome condensation (RCC). The encoded protein may act as a guanine nucleotide exchange factor. This gene is observed to be lost or underexpressed in prostate cancers. There is a pseudogene of this gene on chromosome 10. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2013] |
RCBTB1 Generegulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 This gene encodes a protein with an N-terminal RCC1 domain and a C-terminal BTB (broad complex, tramtrack and bric-a-brac) domain. In rat, over-expression of this gene in vascular smooth muscle cells induced cellular hypertrophy. In rat, the C-terminus of RCBTB1 interacts with the angiotensin II receptor-1A. In humans, this gene maps to a region of chromosome 13q that is frequently deleted in B-cell chronic lymphocytic leukemia and other lymphoid malignancies. [provided by RefSeq, Jul 2008] |
DUP18PDEL18Q GeneChromosome 18 pericentric inversion |
LOC441320 Genechromosome 11 open reading frame2 pseudogene |
DEL18P GeneChromosome 18p deletion syndrome |
DEL18Q GeneChromosome 18q deletion syndrome |
C9ORF24 Genechromosome 9 open reading frame 24 This gene encodes a nuclear- or perinuclear-localized protein with no predicted domains or similarity to other known proteins. Expression of this gene is induced during the differentiation of bronchial epithelial cells, and the encoded protein may play a role in ciliogenesis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011] |
CECR Genecat eye syndrome chromosome region Cat eye syndrome (CES) is characterized clinically by the combination of coloboma of the iris and anal atresia with fistula, downslanting palpebral fissures, preauricular tags and/or pits, frequent occurrence of heart and renal malformations, and normal or near-normal mental development. A small supernumerary chromosome (smaller than chromosome 21) is present, frequently has 2 centromeres, is bisatellited, and represents an inv dup(22)(q11).[supplied by OMIM, Aug 2009] |
LOC100420928 Genechromosome 15 open reading frame 43 pseudogene |
C14ORF2 Genechromosome 14 open reading frame 2 Predicted to be involved in proton motive force-driven ATP synthesis. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF39 Genechromosome 11 open reading frame 39 |
C14ORF1 Genechromosome 14 open reading frame 1 Enables identical protein binding activity. Predicted to be involved in sterol biosynthetic process. Located in transport vesicle. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF30 Genechromosome 11 open reading frame 30 Predicted to enable identical protein binding activity. Predicted to be involved in DNA repair; chromatin organization; and regulation of DNA-templated transcription. Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
SCZD11 GeneSchizophrenia susceptibility locus, chromosome 10q-related |
C20ORF27 Genechromosome 20 open reading frame 27 Enables protein phosphatase 1 binding activity. Involved in positive regulation of non-canonical NF-kappaB signal transduction and positive regulation of transforming growth factor beta receptor signaling pathway. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF24 Genechromosome 20 open reading frame 24 Involved in mitochondrial respirasome assembly and multi-pass transmembrane protein insertion into ER membrane. Located in mitochondrion. Part of multi-pass translocon complex. Implicated in craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 2. [provided by Alliance of Genome Resources, Mar 2025] |
CHAMP1 Genechromosome alignment maintaining phosphoprotein 1 This gene encodes a zinc finger protein that functions as a regulator of chromosome segregation in mitosis. The encoded protein is required for correct alignment of chromosomes on the metaphase plate, and plays a role in maintaining the attachment of sister kinetochores to microtubules from opposite spindle poles. Mutations in this gene are associated with an autosomal dominant form of intellectual disability. [provided by RefSeq, Jul 2017] |
C14ORF132 Genechromosome 14 open reading frame 132 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100526841 Genechromosome 18 open reading frame 32 pseudogene |
LOC441750 Genechromosome 12 open reading frame 49 pseudogene |
CPXCR1 GeneCPX chromosome region, candidate 1 This gene is one of several genes identified in a region of the X chromosome associated with an X-linked cleft palate (CPX) disorder. The encoded protein contains a motif similar to a motif found in zinc-finger proteins. Mutation analysis of this gene has not revealed any mutation which causes the CPX disorder. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Sep 2011] |
C7ORF77 Genechromosome 7 open reading frame 77 |
C7ORF76 Genechromosome 7 open reading frame 76 |
C1ORF53 Genechromosome 1 open reading frame 53 Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF52 Genechromosome 1 open reading frame 52 Enables RNA binding activity. Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF50 Genechromosome 1 open reading frame 50 Enables identical protein binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF56 Genechromosome 1 open reading frame 56 This gene is a proto-oncogene whose promoter is methylated by DNA methyltransferase 3B (DNMT3B), which represses the proto-oncogene. However, a catalytically inactive isoform of DNMT3B is overexpressed in lymphomas, leading to hypomethylation of the proto-oncogene's promoter and derepression of the proto-oncogene. [provided by RefSeq, Sep 2016] |
C1ORF54 Genechromosome 1 open reading frame 54 Predicted to act upstream of or within epithelial cell proliferation involved in renal tubule morphogenesis; phosphatidylinositol 3-kinase/protein kinase B signal transduction; and response to wounding. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C18ORF21 Genechromosome 18 open reading frame 21 |
C18ORF25 Genechromosome 18 open reading frame 25 Enables transcription corepressor activity. Involved in negative regulation of viral life cycle. Is active in chromatin. [provided by Alliance of Genome Resources, Mar 2025] |
HBFQTL4 GeneFetal hemoglobin QTL on chromosome 8 |
DEL15Q24 GeneChromosome 15q24 deletion syndrome |
LOC390314 Genechromosome 20 open reading frame 27 pseudogene |
C16DELQ22 GeneChromosome 16q22 deletion syndrome |
C7ORF25 Genechromosome 7 open reading frame 25 |
C7ORF26 Genechromosome 7 open reading frame 26 Part of integrator complex. Is active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100129168 Genechromosome 6 open reading frame 203 pseudogene |
C6ORF62 Genechromosome 6 open reading frame 62 |
DEL15Q13.3 GeneChromosome 15q13.3 microdeletion syndrome |
C12ORF29 Genechromosome 12 open reading frame 29 Enables RNA ligase (ATP) activity. Involved in response to reactive oxygen species. [provided by Alliance of Genome Resources, Mar 2025] |
DEL5Q12 GeneChromosome 5q12 deletion sydrome |
C19ORF70 Genechromosome 19 open reading frame 70 Involved in cristae formation. Located in mitochondrial crista junction and nucleoplasm. Part of MICOS complex. Implicated in combined oxidative phosphorylation deficiency 37. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF73 Genechromosome 19 open reading frame 73 |
CXORF40A Genechromosome X open reading frame 40A Involved in regulation of interleukin-6 production. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
CXORF40B Genechromosome X open reading frame 40B Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
DUP1Q21 GeneChromosome 1q21.1 duplication syndrome |
C2ORF50 Genechromosome 2 open reading frame 50 Located in cilium. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF57 Genechromosome 2 open reading frame 57 Located in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF54 Genechromosome 2 open reading frame 54 |
LOC645086 Genechromosome 11 open reading frame 58 pseudogene |
WBSCR2 GeneWilliams-Beuren syndrome chromosome region 2 |
C14ORF177 Genechromosome 14 open reading frame 177 Predicted to be located in cytoplasm; motile cilium; and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C14ORF178 Genechromosome 14 open reading frame 178 |
C16ORF95 Genechromosome 16 open reading frame 95 |
LOC100129254 Genechromosome 3 open reading frame 38 pseudogene |
C2ORF27AP2 Genechromosome 2 open reading frame 27A pseudogene 2 |
C2ORF27AP3 Genechromosome 2 open reading frame 27A pseudogene 3 |
C2ORF27AP1 Genechromosome 2 open reading frame 27A pseudogene 1 |
XIC GeneX chromosome inactivation center |
C1ORF210 Genechromosome 1 open reading frame 210 Predicted to be located in early endosome; plasma membrane; and recycling endosome. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF216 Genechromosome 1 open reading frame 216 |
C17ORF62 Genechromosome 17 open reading frame 62 Involved in innate immune response and respiratory burst after phagocytosis. Located in endoplasmic reticulum. Implicated in autosomal recessive chronic granulomatous disease 5. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF64 Genechromosome 17 open reading frame 64 Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C17ORF67 Genechromosome 17 open reading frame 67 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C18ORF8 Genechromosome 18 open reading frame 8 This gene encodes a colon cancer associated protein. [provided by RefSeq, Jan 2013] |
LOC646970 Genechromosome 5 open reading frame 15 pseudogene |
LOC100132762 Genechromosome 17 open reading frame 80 pseudogene |
RSCIS GeneRadiation sensitivity/chromosome instability syndrome, autosomal dominant |
C5ORF58 Genechromosome 5 open reading frame 58 |
C5ORF56 Genechromosome 5 open reading frame 56 |
C5ORF52 Genechromosome 5 open reading frame 52 |
C5ORF51 Genechromosome 5 open reading frame 51 Involved in mitophagy. Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF86 Genechromosome 1 open reading frame 86 Enables K63-linked polyubiquitin modification-dependent protein binding activity and ubiquitin-modified protein reader activity. Involved in interstrand cross-link repair and translesion synthesis. Located in cell junction; chromosome; and nuclear body. Part of Fanconi anaemia nuclear complex and chromatin. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF87 Genechromosome 1 open reading frame 87 |
CXORF36 Genechromosome X open reading frame 36 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
C8ORF17 Genechromosome 8 open reading frame 17 Predicted to be involved in negative regulation of apoptotic process and positive regulation of cell population proliferation. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF19 Genechromosome 4 open reading frame 19 |
C4ORF17 Genechromosome 4 open reading frame 17 |
C3ORF84 Genechromosome 3 open reading frame 84 |
CXORF38 Genechromosome X open reading frame 38 Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100129989 Genechromosome 12 open reading frame 29 pseudogene |
C9ORF16 Genechromosome 9 open reading frame 16 Enables molecular adaptor activity. Involved in intermediate filament bundle assembly. Located in cell junction; polymeric cytoskeletal fiber; and subapical part of cell. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420859 Genechromosome 2 open reading frame 69 pseudogene |
C16ORF62 Genechromosome 16 open reading frame 62 Involved in Golgi to plasma membrane transport and endocytic recycling. Located in endosome. Implicated in Ritscher-Schinzel syndrome. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF78 Genechromosome 20 open reading frame 78 |
C3ORF80 Genechromosome 3 open reading frame 80 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
DEL1P36 GeneChromosome 1p36 deletion syndrome |
C11ORF24 Genechromosome 11 open reading frame 24 Located in Golgi apparatus and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100130455 Genechromosome 20 open reading frame 196 pseudogene |
C10ORF67 Genechromosome 10 open reading frame 67 Predicted to be located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF62 Genechromosome 10 open reading frame 62 |
C6ORF229 Genechromosome 6 open reading frame 229 |
C6ORF222 Genechromosome 6 open reading frame 222 |
C6ORF223 Genechromosome 6 open reading frame 223 |
C6ORF226 Genechromosome 6 open reading frame 226 |
C9ORF171 Genechromosome 9 open reading frame 171 Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF170 Genechromosome 9 open reading frame 170 |
C1ORF162 Genechromosome 1 open reading frame 162 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF167 Genechromosome 1 open reading frame 167 Implicated in coronary artery disease. [provided by Alliance of Genome Resources, Mar 2025] |
GTSCR1 GeneGilles de la Tourette syndrome chromosome region, candidate 1 (non-protein coding) Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF168 Genechromosome 1 open reading frame 168 Involved in T cell receptor signaling pathway and cell adhesion mediated by integrin. Located in immunological synapse and membrane raft. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100526840 Genechromosome 18 open reading frame 32 pseudogene |
C2ORF83 Genechromosome 2 open reading frame 83 Predicted to enable vitamin transmembrane transporter activity. Predicted to be involved in vitamin transmembrane transport. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C18ORF12 Genechromosome 18 open reading frame 12 |
LOC389705 Genechromosome 4 open reading frame 27 pseudogene |
DEL7Q11.23 GeneChromosome 7q11.23 deletion syndrome, distal, 1.2Mb |
C9ORF91 Genechromosome 9 open reading frame 91 Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100289196 Genechromosome 7 open reading frame 73 pseudogene |
C12ORF57 Genechromosome 12 open reading frame 57 This gene is ubiquitously expressed in human tissues. It is required for development of the human corpus callosum. Mutations in this gene are associated with Temtamy syndrome (TEMTYS). Multiple alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Sep 2014] |
C12ORF54 Genechromosome 12 open reading frame 54 |
DUP17Q21.31 GeneChromosome 17q21.31 duplication syndrome |
C19ORF40 Genechromosome 19 open reading frame 40 FAAP24 is a component of the Fanconi anemia (FA) core complex (see MIM 227650), which plays a crucial role in DNA damage response (Ciccia et al., 2007 [PubMed 17289582]).[supplied by OMIM, Mar 2008] |
C19ORF43 Genechromosome 19 open reading frame 43 Enables 3'-5' exonuclease activity and 5'-3' exonuclease activity. Involved in rRNA catabolic process. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF45 Genechromosome 19 open reading frame 45 |
C19ORF47 Genechromosome 19 open reading frame 47 Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C19ORF48 Genechromosome 19 open reading frame 48 |
C6ORF118 Genechromosome 6 open reading frame 118 |
C2ORF61 Genechromosome 2 open reading frame 61 Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in epigenetic programing of male pronucleus. Predicted to act upstream of or within pyrimidine-containing compound catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be active in female pronucleus; germinal vesicle; and male pronucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF69 Genechromosome 2 open reading frame 69 Involved in oxidative phosphorylation. Located in mitochondrion. Implicated in combined oxidative phosphorylation deficiency 53. [provided by Alliance of Genome Resources, Mar 2025] |
C2ORF68 Genechromosome 2 open reading frame 68 |
LOC100128808 Genechromosome 11 open reading frame 51 pseudogene |
LOC100420925 Genechromosome 2 open reading frame 27A pseudogene |
C7ORF55 Genechromosome 7 open reading frame 55 Involved in mitochondrial proton-transporting ATP synthase complex assembly. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C7ORF57 Genechromosome 7 open reading frame 57 |
C7ORF50 Genechromosome 7 open reading frame 50 Enables hormone activity. Involved in negative regulation of cholesterol biosynthetic process. Is active in extracellular space. [provided by Alliance of Genome Resources, Mar 2025] |
C14ORF142 Genechromosome 14 open reading frame 142 Involved in tRNA threonylcarbamoyladenosine modification. Located in cytosol; nucleolus; and nucleoplasm. Part of EKC/KEOPS complex. Implicated in Galloway-Mowat syndrome. [provided by Alliance of Genome Resources, Mar 2025] |
C14ORF144 Genechromosome 14 open reading frame 144 |
DEL19Q13.11 GeneChromosome 19q13.11 deletion syndrome |
LOC100288558 Genechromosome 4 open reading frame 46 pseudogene |
LOC100420770 Genechromosome 12 open reading frame 10 pseudogene |
LOC100420779 Genechromosome 16 open reading frame 70 pseudogene |
LOC100420778 Genechromosome 2 open reading frame 27A pseudogene |
C14ORF80 Genechromosome 14 open reading frame 80 Predicted to be involved in positive regulation of smoothened signaling pathway. Predicted to be located in centriole and cilium. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF48 Genechromosome 15 open reading frame 48 This gene was first identified in a study of human esophageal squamous cell carcinoma tissues. Levels of both the message and protein are reduced in carcinoma samples. In adult human tissues, this gene is expressed in the the esophagus, stomach, small intestine, colon and placenta. Alternatively spliced transcript variants that encode the same protein have been identified. [provided by RefSeq, Jun 2012] |
C15ORF40 Genechromosome 15 open reading frame 40 Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
C15ORF43 Genechromosome 15 open reading frame 43 Predicted to be involved in homologous chromosome pairing at meiosis and meiotic attachment of telomere to nuclear envelope. Predicted to act upstream of or within meiosis I; oogenesis; and spermatogenesis. Predicted to be located in chromosome, telomeric region. Predicted to be active in nuclear inner membrane. Implicated in spermatogenic failure 59. [provided by Alliance of Genome Resources, Mar 2025] |
C21ORF91 Genechromosome 21 open reading frame 91 Predicted to be involved in cerebral cortex neuron differentiation and positive regulation of dendritic spine development. [provided by Alliance of Genome Resources, Mar 2025] |
DEL10Q26 GeneChromosome 10q deletion syndrome |
WBSCR16 GeneWilliams-Beuren syndrome chromosome region 16 This gene encodes a protein containing regulator of chromosome condensation 1-like repeats. The encoded protein may function as a guanine nucleotide exchange factor. This gene is located in a region of chromosome 7 that is deleted in Williams-Beuren syndrome, a multisystem developmental disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013] |
C8ORF60 Genechromosome 8 open reading frame 60 |
LOC100287212 Genechromosome 4 open reading frame 3 pseudogene |
C4ORF50 Genechromosome 4 open reading frame 50 |
C10ORF131 Genechromosome 10 open reading frame 131 |
OTDD GeneOtodental dysplasia chromosome deletion syndrome |
DEL17Q11.2 Genechromosome 17q11.2 deletion syndrome |
LOC100125409 Genechromosome 4 open reading frame 27 pseudogene |
LOC399815 Genechromosome 10 open reading frame 88 pseudogene |
C15ORF62 Genechromosome 15 open reading frame 62 Predicted to enable small GTPase binding activity. Predicted to be involved in Rho protein signal transduction; positive regulation of cellular component biogenesis; and regulation of cell shape. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
AMLCR2 Geneacute myeloid leukemia chromosome region 2 |
C16ORF13 Genechromosome 16 open reading frame 13 |
DUP8Q22.1 GeneLeri pleonosteosis chromosome duplication syndrome |
C11ORF21 Genechromosome 11 open reading frame 21 Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
C4ORF3 Genechromosome 4 open reading frame 3 Predicted to act upstream of or within negative regulation of ATPase-coupled calcium transmembrane transporter activity. Predicted to be located in endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF71 Genechromosome 11 open reading frame 71 |
C11ORF70 Genechromosome 11 open reading frame 70 Predicted to be located in cytoplasm and motile cilium. Implicated in primary ciliary dyskinesia 38. [provided by Alliance of Genome Resources, Mar 2025] |
C11ORF73 Genechromosome 11 open reading frame 73 This gene encodes an evolutionarily conserved nuclear transport receptor that mediates heat-shock-induced nuclear import of 70 kDa heat-shock proteins (Hsp70s) through interactions with FG-nucleoporins. The protein mediates transport of the ATP form but not the ADP form of Hsp70 proteins under conditions of heat shock stress. Structural analyses demonstrate that the protein forms an asymmetric homodimer and that the N-terminal domain consists of a jelly-roll/beta-sandwich fold structure that contains hydrophobic pockets involved in FG-nucleoporin recognition. Reduction of RNA expression levels in HeLa cells using small interfering RNAs results in inhibition of heat shock-induced nuclear accumulation of Hsp70s, indicating a role for this gene in regulation of Hsp70 nuclear import during heat shock stress. [provided by RefSeq, Apr 2016] |
C11ORF74 Genechromosome 11 open reading frame 74 This gene encodes a protein that was identified as a cellular interacting partner of non-structural protein 10 of the severe acute respiratory syndrome coronavirus (SARS-CoV). The encoded protein may function as a negative regulator of transcription. There is a pseudogene for this gene on chromosome 1. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2013] |
HDLCQ2 GeneHigh density lipoprotein cholesterol level QTL on chromosome 8 |
C10ORF54 Genechromosome 10 open reading frame 54 Enables endopeptidase activator activity; enzyme binding activity; and identical protein binding activity. Involved in several processes, including negative regulation of cytokine production; positive regulation of metabolic process; and regulation of T cell activation. Located in plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C10ORF53 Genechromosome 10 open reading frame 53 |
DEL4Q21 GeneChromosome 4q21 deletion syndrome |
DUP22Q13 GeneChromosome 22q13 duplication syndrome |
GCY Genegrowth control, Y chromosome influenced |
C9ORF147 Genechromosome 9 open reading frame 147 |
C9ORF142 Genechromosome 9 open reading frame 142 The protein encoded by this gene plays a role in the nonhomologous end joining (NHEJ) pathway of DNA double-strand break repair. The encoded protein may function to stabilize the Ku70/Ku80 heterodimer to facilitate the assembly and maintain the stability of the NHEJ complex. [provided by RefSeq, Jul 2016] |
C1ORF131 Genechromosome 1 open reading frame 131 Enables RNA binding activity. Involved in ribosomal small subunit biogenesis. Located in chromosome. Part of small-subunit processome. [provided by Alliance of Genome Resources, Mar 2025] |
C1ORF134 Genechromosome 1 open reading frame 134 |
C1ORF137 Genechromosome 1 open reading frame 137 |
LOC100420789 Genechromosome 2 open reading frame 27A pseudogene |
C3ORF30 Genechromosome 3 open reading frame 30 Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF36 Genechromosome 3 open reading frame 36 |
C3ORF35 Genechromosome 3 open reading frame 35 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C3ORF38 Genechromosome 3 open reading frame 38 Involved in positive regulation of apoptotic process. Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
LOC644462 Geneamyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 2 pseudogene |
LOC389473 Genechromosome 5 open reading frame 13 pseudogene |
C20ORF203 Genechromosome 20 open reading frame 203 The protein encoded by this gene is thought to be a human-specific protein. Currently available evidence suggests that orthologous regions in other organisms contain sequence differences that would not support production of a protein product. Genome-wide association studies have suggested the possibility that a SNP in the 3' UTR, rs17123507, could be associated with nicotine addiction. Expression of this gene may be elevated in some individuals with Alzheimer's disease. [provided by RefSeq, Mar 2017] |
C20ORF202 Genechromosome 20 open reading frame 202 |
C9ORF40 Genechromosome 9 open reading frame 40 |
C9ORF41 Genechromosome 9 open reading frame 41 The protein encoded by this gene is a methyltransferase that converts carnosine to anserine, a dipeptide found abundantly in skeletal muscle. The encoded protein can methylate other dipeptides as well. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Feb 2016] |
C9ORF43 Genechromosome 9 open reading frame 43 |
C9ORF47 Genechromosome 9 open reading frame 47 |
C16ORF96 Genechromosome 16 open reading frame 96 |
C16ORF97 Genechromosome 16 open reading frame 97 |
C16ORF93 Genechromosome 16 open reading frame 93 Predicted to act upstream of or within gene expression; single fertilization; and sperm flagellum assembly. Predicted to be located in acrosomal vesicle and sperm principal piece. Predicted to be part of radial spoke. Predicted to be active in axoneme. [provided by Alliance of Genome Resources, Mar 2025] |
C16ORF90 Genechromosome 16 open reading frame 90 |
C16ORF91 Genechromosome 16 open reading frame 91 Predicted to be involved in mitochondrial respiratory chain complex III assembly. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
LOC729930 Genechromosome 11 open reading frame 74 pseudogene |
DEL17P13.1 GeneChromosome 17p13.1 deletion syndrome |
C12ORF80 Genechromosome 12 open reading frame 80 |
DEL11P15P14 GeneChromosome 11p15-p14 deletion syndrome |
C6ORF141 Genechromosome 6 open reading frame 141 Predicted to act upstream of or within blastocyst hatching. [provided by Alliance of Genome Resources, Mar 2025] |
DEL1Q21 GeneChromosome 1q21.1 deletion syndrome |
C1ORF74 Genechromosome 1 open reading frame 74 |
C2ORF72 Genechromosome 2 open reading frame 72 |
C18ORF42 Genechromosome 18 open reading frame 42 Enables protein kinase A binding activity. Involved in protein localization. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Mar 2025] |
C9ORF78 Genechromosome 9 open reading frame 78 Enables U5 snRNA binding activity. Involved in mRNA cis splicing, via spliceosome and regulation of homologous chromosome segregation. Located in chromosome, centromeric region; cytosol; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
NHP2L1 GeneNHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) Originally named because of its sequence similarity to the Saccharomyces cerevisiae NHP2 (non-histone protein 2), this protein appears to be a highly conserved nuclear protein that is a component of the [U4/U6.U5] tri-snRNP. It binds to the 5' stem-loop of U4 snRNA. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008] |
C1ORF220 Genechromosome 1 open reading frame 220 |
C1ORF229 Genechromosome 1 open reading frame 229 |
C9ORF173 Genechromosome 9 open reading frame 173 Predicted to be active in cytoskeleton. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF48 Genechromosome 6 open reading frame 48 Predicted to enable double-stranded RNA binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
C6ORF47 Genechromosome 6 open reading frame 47 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C13ORF42 Genechromosome 13 open reading frame 42 |
C2ORF92 Genechromosome 2 open reading frame 92 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
C20ORF204 Genechromosome 20 open reading frame 204 |
C10ORF143 Genechromosome 10 open reading frame 143 |
C1ORF202 Genechromosome 1 open reading frame 202 |
C17ORF113 Genechromosome 17 open reading frame 113 |
C19ORF85 Genechromosome 19 open reading frame 85 |
C4ORF54 Genechromosome 4 open reading frame 54 |
C8ORF90 Genechromosome 8 open reading frame 90 |
C1ORF232 Genechromosome 1 open reading frame 230 |
C17ORF114 Genechromosome 17 open reading frame 114 |
C3ORF85 Genechromosome 3 open reading frame 85 |
C7orf78 Genechromosome 7 open reading frame 78 |
CXORF49C Genechromosome X open reading frame 49C |
NSRP1 Genenuclear speckle splicing regulatory protein 1 Enables mRNA binding activity. Involved in developmental process and regulation of alternative mRNA splicing, via spliceosome. Located in nuclear speck. Part of ribonucleoprotein complex. [provided by Alliance of Genome Resources, Mar 2025] |
RNU5B-1 GeneRNA, U5B small nuclear 1 Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U5 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
SNRPCP6 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 6 |
RNU6-67P GeneRNA, U6 small nuclear 67, pseudogene |
RNU7-36P GeneRNA, U7 small nuclear 36 pseudogene |
NR1D1 Genenuclear receptor subfamily 1, group D, member 1 This gene encodes a transcription factor that is a member of the nuclear receptor subfamily 1. The encoded protein is a ligand-sensitive transcription factor that negatively regulates the expression of core clock proteins. In particular this protein represses the circadian clock transcription factor aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL). This protein may also be involved in regulating genes that function in metabolic, inflammatory and cardiovascular processes. [provided by RefSeq, Jan 2013] |
NR1D2 Genenuclear receptor subfamily 1, group D, member 2 This gene encodes a member of the nuclear hormone receptor family, specifically the NR1 subfamily of receptors. The encoded protein functions as a transcriptional repressor and may play a role in circadian rhythms and carbohydrate and lipid metabolism. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009] |
LOC100420828 Genenuclear pore associated protein 1 pseudogene |
HNRNPCP4 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 4 |
HNRNPCP2 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 2 |
RNU1-16P GeneRNA, U1 small nuclear 16, pseudogene |
LRIF1 Geneligand dependent nuclear receptor interacting factor 1 Predicted to enable nuclear retinoic acid receptor binding activity. Involved in dosage compensation by inactivation of X chromosome. Located in centriolar satellite; chromosome, telomeric region; and nuclear lumen. Implicated in facioscapulohumeral muscular dystrophy 3. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-53P GeneRNA, U7 small nuclear 53 pseudogene |
HNRNPFP1 Geneheterogeneous nuclear ribonucleoprotein F pseudogene 1 |
RNU5A-5P GeneRNA, U5A small nuclear 5, pseudogene |
NMTRS-TGA3-1 Genenuclear-encoded mitochondrial transfer RNA-Ser (TGA) 3-1 |
PCNA Geneproliferating cell nuclear antigen The protein encoded by this gene is found in the nucleus and is a cofactor of DNA polymerase delta. The encoded protein acts as a homotrimer and helps increase the processivity of leading strand synthesis during DNA replication. In response to DNA damage, this protein is ubiquitinated and is involved in the RAD6-dependent DNA repair pathway. Two transcript variants encoding the same protein have been found for this gene. Pseudogenes of this gene have been described on chromosome 4 and on the X chromosome. [provided by RefSeq, Jul 2008] |
PCNP GenePEST proteolytic signal containing nuclear protein Involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein ubiquitination. Located in nuclear body. [provided by Alliance of Genome Resources, Mar 2025] |
TRNP1 GeneTMF1-regulated nuclear protein 1 Predicted to enable DNA binding activity. Predicted to be involved in several processes, including cerebellar cortex morphogenesis; neural precursor cell proliferation; and regulation of cell population proliferation. Predicted to be located in euchromatin. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
U2AF1L4 GeneU2 small nuclear RNA auxiliary factor 1-like 4 Predicted to enable pre-mRNA 3'-splice site binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleoplasm. Predicted to be part of U2AF complex and spliceosomal complex. [provided by Alliance of Genome Resources, Mar 2025] |
RNU2-6P GeneRNA, U2 small nuclear 6, pseudogene |
SP140L GeneSP140 nuclear body protein-like Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
TC2N Genetandem C2 domains, nuclear Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPA1P50 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 50 |
SAMSN1 GeneSAM domain, SH3 domain and nuclear localization signals 1 SAMSN1 is a member of a novel gene family of putative adaptors and scaffold proteins containing SH3 and SAM (sterile alpha motif) domains (Claudio et al., 2001 [PubMed 11536050]).[supplied by OMIM, Mar 2008] |
HNRNPA1P57 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 57 |
HNRNPA1P59 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 59 |
LOC402230 Genesmall nuclear ribonucleoprotein 27kDa (U4/U6.U5) pseudogene |
HNRNPABP1 Geneheterogeneous nuclear ribonucleoprotein A/B pseudogene 1 |
NUCKS1 Genenuclear casein kinase and cyclin-dependent kinase substrate 1 This gene encodes a nuclear protein that is highly conserved in vertebrates. The conserved regions of the protein contain several consensus phosphorylation sites for casein kinase II and cyclin-dependent kinases, two putative nuclear localization signals, and a basic DNA-binding domain. It is phosphorylated in vivo by Cdk1 during mitosis of the cell cycle. [provided by RefSeq, Aug 2010] |
LOC100131425 GeneLSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene |
LOC100820733 GeneLSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene |
RNU7-1 GeneRNA, U7 small nuclear 1 Implicated in Aicardi-Goutieres syndrome. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-46P GeneRNA, U6 small nuclear 46, pseudogene |
NMTRL-TAA1-1 Genenuclear-encoded mitochondrial transfer RNA-Leu (TAA) 1-1 |
NRBF2P5 Genenuclear receptor binding factor 2 pseudogene 5 |
LOC100127934 Genemeiotic nuclear divisions 1 homolog (S. cerevisiae) pseudogene |
RNU5E-6P GeneRNA, U5E small nuclear 6, pseudogene |
RNU7-24P GeneRNA, U7 small nuclear 24 pseudogene |
SNRPD3 Genesmall nuclear ribonucleoprotein D3 polypeptide 18kDa This gene encodes a core component of the spliceosome, which is a nuclear ribonucleoprotein complex that functions in pre-mRNA splicing. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013] |
SNRPD2 Genesmall nuclear ribonucleoprotein D2 polypeptide 16.5kDa The protein encoded by this gene belongs to the small nuclear ribonucleoprotein core protein family. It is required for pre-mRNA splicing and small nuclear ribonucleoprotein biogenesis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009] |
SNRPD1 Genesmall nuclear ribonucleoprotein D1 polypeptide 16kDa This gene encodes a small nuclear ribonucleoprotein that belongs to the SNRNP core protein family. The protein may act as a charged protein scaffold to promote SNRNP assembly or strengthen SNRNP-SNRNP interactions through nonspecific electrostatic contacts with RNA. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2014] |
HNRNPA1P63 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 63 |
HNRNPA1P68 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 68 |
NPLOC4 Genenuclear protein localization 4 homolog (S. cerevisiae) Predicted to enable ubiquitin binding activity and ubiquitin protein ligase binding activity. Predicted to contribute to K48-linked polyubiquitin modification-dependent protein binding activity and K63-linked polyubiquitin modification-dependent protein binding activity. Involved in negative regulation of RIG-I signaling pathway; negative regulation of type I interferon production; and proteolysis involved in protein catabolic process. Located in nucleus. Part of UFD1-NPL4 complex and VCP-NPL4-UFD1 AAA ATPase complex. [provided by Alliance of Genome Resources, Mar 2025] |
NXF2B Genenuclear RNA export factor 2B This gene encodes a member of a family of nuclear RNA export proteins. The encoded protein is associated with the nuclear envelope and aids in the export of mRNAs. There is a closely related paralog of this gene located adjacent on chromosome X and on the opposite strand. [provided by RefSeq, Jun 2015] |
RNU1-28P GeneRNA, U1 small nuclear 28, pseudogene |
RNU1-13P GeneRNA, U1 small nuclear 13, pseudogene |
MNDA Genemyeloid cell nuclear differentiation antigen The myeloid cell nuclear differentiation antigen (MNDA) is detected only in nuclei of cells of the granulocyte-monocyte lineage. A 200-amino acid region of human MNDA is strikingly similar to a region in the proteins encoded by a family of interferon-inducible mouse genes, designated Ifi-201, Ifi-202, and Ifi-203, that are not regulated in a cell- or tissue-specific fashion. The 1.8-kb MNDA mRNA, which contains an interferon-stimulated response element in the 5-prime untranslated region, was significantly upregulated in human monocytes exposed to interferon alpha. MNDA is located within 2,200 kb of FCER1A, APCS, CRP, and SPTA1. In its pattern of expression and/or regulation, MNDA resembles IFI16, suggesting that these genes participate in blood cell-specific responses to interferons. [provided by RefSeq, Jul 2008] |
MND1 Genemeiotic nuclear divisions 1 homolog (S. cerevisiae) The product of the MND1 gene associates with HOP2 (MIM 608665) to form a stable heterodimeric complex that binds DNA and stimulates the recombinase activity of RAD51 (MIM 179617) and DMC1 (MIM 602721) (Chi et al., 2007 [PubMed 17639080]). Both the MND1 and HOP2 genes are indispensable for meiotic recombination.[supplied by OMIM, Mar 2008] |
RNU7-5P GeneRNA, U7 small nuclear 5 pseudogene |
NUTF2P8 Genenuclear transport factor 2 pseudogene 8 |
NUTF2P2 Genenuclear transport factor 2 pseudogene 2 |
NUTF2P6 Genenuclear transport factor 2 pseudogene 6 |
NUTF2P7 Genenuclear transport factor 2 pseudogene 7 |
NUTF2P4 Genenuclear transport factor 2 pseudogene 4 |
RNU6ATAC5P GeneRNA, U6atac small nuclear 5, pseudogene |
HNRNPA1P6 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 6 |
RMND1 Generequired for meiotic nuclear division 1 homolog (S. cerevisiae) The protein encoded by this gene belongs to the evolutionary conserved sif2 family of proteins that share the DUF155 domain in common. This protein is thought to be localized in the mitochondria and involved in mitochondrial translation. Mutations in this gene are associated with combined oxidative phosphorylation deficiency-11. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Dec 2012] |
NFYC Genenuclear transcription factor Y, gamma This gene encodes one subunit of a trimeric complex forming a highly conserved transcription factor that binds with high specificity to CCAAT motifs in the promoters of a variety of genes. The encoded protein, subunit C, forms a tight dimer with the B subunit, a prerequisite for subunit A association. The resulting trimer binds to DNA with high specificity and affinity. Subunits B and C each contain a histone-like motif. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2008] |
NFYB Genenuclear transcription factor Y, beta The protein encoded by this gene is one subunit of a trimeric complex, forming a highly conserved transcription factor that binds with high specificity to CCAAT motifs in the promoter regions in a variety of genes. This gene product, subunit B, forms a tight dimer with the C subunit, a prerequisite for subunit A association. The resulting trimer binds to DNA with high specificity and affinity. Subunits B and C each contain a histone-like motif. Observation of the histone nature of these subunits is supported by two types of evidence; protein sequence alignments and experiments with mutants. [provided by RefSeq, Jul 2008] |
NFYA Genenuclear transcription factor Y, alpha The protein encoded by this gene is one subunit of a trimeric complex, forming a highly conserved transcription factor that binds to CCAAT motifs in the promoter regions in a variety of genes. Subunit A associates with a tight dimer composed of the B and C subunits, resulting in a trimer that binds to DNA with high specificity and affinity. The sequence specific interactions of the complex are made by the A subunit, suggesting a role as the regulatory subunit. In addition, there is evidence of post-transcriptional regulation in this gene product, either by protein degradation or control of translation. Further regulation is represented by alternative splicing in the glutamine-rich activation domain, with clear tissue-specific preferences for the two isoforms. [provided by RefSeq, Jul 2008] |
PCNAP1 Geneproliferating cell nuclear antigen pseudogene 1 |
PCNAP4 Geneproliferating cell nuclear antigen pseudogene 4 |
LSM8 GeneLSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) This gene encodes a member of the like-Sm family of proteins. The encoded protein consists of a closed barrel shape, made up of five anti-parallel beta strands and an alpha helix. This protein partners with six paralogs to form a heteroheptameric ring which transiently binds U6 small nuclear RNAs and is involved in the general maturation of RNA in the nucleus. [provided by RefSeq, Jan 2010] |
LSM4 GeneLSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011] |
LSM5 GeneLSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004] |
LOC100420162 Genenuclear RNA export factor 5 pseudogene |
LSM6 GeneLSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004] |
SNRPGP9 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 9 |
SNRPGP7 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 7 |
SNRPGP6 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 6 |
SNRPGP5 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 5 |
SNRPGP4 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 4 |
SNRPGP1 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 1 |
LOC100129534 Genesmall nuclear ribonucleoprotein polypeptide N pseudogene |
NCOA2 Genenuclear receptor coactivator 2 The protein encoded by this gene functions as a transcriptional coactivator for nuclear hormone receptors, including steroid, thyroid, retinoid, and vitamin D receptors. The encoded protein acts as an intermediary factor for the ligand-dependent activity of these nuclear receptors, which regulate their target genes upon binding of cognate response elements. This gene has been found to be involved in translocations that result in fusions with other genes in various cancers, including the lysine acetyltransferase 6A (KAT6A) gene in acute myeloid leukemia, the ETS variant 6 (ETV6) gene in acute lymphoblastic leukemia, and the hes related family bHLH transcription factor with YRPW motif 1 (HEY1) gene in mesenchymal chondrosarcoma. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2016] |
NCOA3 Genenuclear receptor coactivator 3 The protein encoded by this gene is a nuclear receptor coactivator that interacts with nuclear hormone receptors to enhance their transcriptional activator functions. The encoded protein has histone acetyltransferase activity and recruits p300/CBP-associated factor and CREB binding protein as part of a multisubunit coactivation complex. This protein is initially found in the cytoplasm but is translocated into the nucleus upon phosphorylation. Several transcript variants encoding different isoforms have been found for this gene. In addition, a polymorphic repeat region is found in the C-terminus of the encoded protein. [provided by RefSeq, Mar 2010] |
NCOA1 Genenuclear receptor coactivator 1 The protein encoded by this gene acts as a transcriptional coactivator for steroid and nuclear hormone receptors. It is a member of the p160/steroid receptor coactivator (SRC) family and like other family members has histone acetyltransferase activity and contains a nuclear localization signal, as well as bHLH and PAS domains. The product of this gene binds nuclear receptors directly and stimulates the transcriptional activities in a hormone-dependent fashion. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008] |
NCOA6 Genenuclear receptor coactivator 6 The protein encoded by this gene is a transcriptional coactivator that can interact with nuclear hormone receptors to enhance their transcriptional activator functions. This protein has been shown to be involved in the hormone-dependent coactivation of several receptors, including prostanoid, retinoid, vitamin D3, thyroid hormone, and steroid receptors. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jun 2011] |
NCOA7 Genenuclear receptor coactivator 7 Enables nuclear receptor binding activity and nuclear receptor coactivator activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
NCOA4 Genenuclear receptor coactivator 4 This gene encodes an androgen receptor coactivator. The encoded protein interacts with the androgen receptor in a ligand-dependent manner to enhance its transcriptional activity. Chromosomal translocations between this gene and the ret tyrosine kinase gene, also located on chromosome 10, have been associated with papillary thyroid carcinoma. Alternatively spliced transcript variants have been described. Pseudogenes are present on chromosomes 4, 5, 10, and 14. [provided by RefSeq, Feb 2009] |
NCOA5 Genenuclear receptor coactivator 5 This gene encodes a coregulator for the alpha and beta estrogen receptors and the orphan nuclear receptor NR1D2. The protein localizes to the nucleus, and is thought to have both coactivator and corepressor functions. Its interaction with nuclear receptors is independent of the AF2 domain on the receptors, which is known to regulate interaction with other coreceptors. Several alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2017] |
RNU7-62P GeneRNA, U7 small nuclear 62 pseudogene |
HNRNPAB Geneheterogeneous nuclear ribonucleoprotein A/B This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are produced by RNA polymerase II and are components of the heterogeneous nuclear RNA (hnRNA) complexes. They are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene, which binds to one of the components of the multiprotein editosome complex, has two repeats of quasi-RRM (RNA recognition motif) domains that bind to RNAs. Two alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008] |
HNRNPA1P42 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 42 |
HNRNPA1P41 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 41 |
HNRNPA1P46 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 46 |
HNRNPA1P47 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 47 |
HNRNPA1P44 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 44 |
HNRNPA1P45 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 45 |
HNRNPA3 Geneheterogeneous nuclear ribonucleoprotein A3 Enables RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Located in nucleus. Part of catalytic step 2 spliceosome. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPA0 Geneheterogeneous nuclear ribonucleoprotein A0 This gene belongs to the A/B subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two repeats of quasi-RRM domains that bind RNAs, followed by a glycine-rich C-terminus. [provided by RefSeq, Jul 2008] |
HNRNPA1 Geneheterogeneous nuclear ribonucleoprotein A1 This gene encodes a member of a family of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs), which are RNA-binding proteins that associate with pre-mRNAs in the nucleus and influence pre-mRNA processing, as well as other aspects of mRNA metabolism and transport. The protein encoded by this gene is one of the most abundant core proteins of hnRNP complexes and plays a key role in the regulation of alternative splicing. Mutations in this gene have been observed in individuals with amyotrophic lateral sclerosis 20. Multiple alternatively spliced transcript variants have been found. There are numerous pseudogenes of this gene distributed throughout the genome. [provided by RefSeq, Feb 2016] |
RNU6-79P GeneRNA, U6 small nuclear 79, pseudogene |
NARFL Genenuclear prelamin A recognition factor-like Predicted to enable 4 iron, 4 sulfur cluster binding activity and metal ion binding activity. Involved in several processes, including intracellular oxygen homeostasis; iron-sulfur cluster assembly; and response to hypoxia. Part of cytosolic [4Fe-4S] assembly targeting complex. [provided by Alliance of Genome Resources, Mar 2025] |
RNU4-7P GeneRNA, U4 small nuclear 7, pseudogene |
NFKBIB Genenuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta The protein encoded by this gene belongs to the NF-kappa-B inhibitor family, which inhibit NF-kappa-B by complexing with, and trapping it in the cytoplasm. Phosphorylation of serine residues on these proteins by kinases marks them for destruction via the ubiquitination pathway, thereby allowing activation of the NF-kappa-B, which translocates to the nucleus to function as a transcription factor. Alternatively spliced transcript variants have been found for this gene.[provided by RefSeq, Jul 2011] |
NFKBID Genenuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta Predicted to enable NF-kappaB binding activity. Predicted to be involved in T cell receptor signaling pathway; positive regulation of T-helper 17 cell differentiation; and regulation of gene expression. Predicted to act upstream of or within several processes, including negative regulation of T cell differentiation in thymus; negative regulation of canonical NF-kappaB signal transduction; and positive regulation of thymocyte apoptotic process. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
NFKBIE Genenuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon The protein encoded by this gene binds to components of NF-kappa-B, trapping the complex in the cytoplasm and preventing it from activating genes in the nucleus. Phosphorylation of the encoded protein targets it for destruction by the ubiquitin pathway, which activates NF-kappa-B by making it available to translocate to the nucleus. [provided by RefSeq, Sep 2011] |
NFKBIZ Genenuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta This gene is a member of the ankyrin-repeat family and is induced by lipopolysaccharide (LPS). The C-terminal portion of the encoded product which contains the ankyrin repeats, shares high sequence similarity with the I kappa B family of proteins. The latter are known to play a role in inflammatory responses to LPS by their interaction with NF-B proteins through ankyrin-repeat domains. Studies in mouse indicate that this gene product is one of the nuclear I kappa B proteins and an activator of IL-6 production. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
NR5A2 Genenuclear receptor subfamily 5, group A, member 2 The protein encoded by this gene is a DNA-binding zinc finger transcription factor and is a member of the fushi tarazu factor-1 subfamily of orphan nuclear receptors. The encoded protein is involved in the expression of genes for hepatitis B virus and cholesterol biosynthesis, and may be an important regulator of embryonic development. [provided by RefSeq, Jun 2016] |
NR5A1 Genenuclear receptor subfamily 5, group A, member 1 The protein encoded by this gene is a transcriptional activator involved in sex determination. The encoded protein binds DNA as a monomer. Defects in this gene are a cause of XY sex reversal with or without adrenal failure as well as adrenocortical insufficiency without ovarian defect. [provided by RefSeq, Jul 2008] |
RNU6-8 GeneRNA, U6 small nuclear 8 Predicted to enable U4 snRNA binding activity. Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U6 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-9 GeneRNA, U6 small nuclear 9 Predicted to enable U4 snRNA binding activity. Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U6 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-7 GeneRNA, U6 small nuclear 7 Predicted to enable U4 snRNA binding activity. Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U6 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-1 GeneRNA, U6 small nuclear 1 Predicted to enable U4 snRNA binding activity. Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U6 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-2 GeneRNA, U6 small nuclear 2 Predicted to enable U4 snRNA binding activity. Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U6 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
NR6A1 Genenuclear receptor subfamily 6, group A, member 1 This gene encodes an orphan nuclear receptor which is a member of the nuclear hormone receptor family. Its expression pattern suggests that it may be involved in neurogenesis and germ cell development. The protein can homodimerize and bind DNA, but in vivo targets have not been identified. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Jun 2013] |
NUDC GenenudC nuclear distribution protein This gene encodes a nuclear distribution protein that plays an essential role in mitosis and cytokinesis. The encoded protein is involved in spindle formation during mitosis and in microtubule organization during cytokinesis. Pseudogenes of this gene are found on chromosome 2. [provided by RefSeq, Feb 2012] |
RNU6-69P GeneRNA, U6 small nuclear 69, pseudogene |
LOC105376955 Genenuclear pore membrane glycoprotein 210-like |
RNU1-20P GeneRNA, U1 small nuclear 20, pseudogene |
LOC100421782 Geneheterogeneous nuclear ribonucleoprotein A1-like 2 pseudogene |
GEMIN8P2 Genegem (nuclear organelle) associated protein 8 pseudogene 2 |
RNU7-47P GeneRNA, U7 small nuclear 47 pseudogene |
PIR Genepirin (iron-binding nuclear protein) This gene encodes a member of the cupin superfamily. The encoded protein is an Fe(II)-containing nuclear protein expressed in all tissues of the body and concentrated within dot-like subnuclear structures. Interactions with nuclear factor I/CCAAT box transcription factor as well as B cell lymphoma 3-encoded oncoprotein suggest the encoded protein may act as a transcriptional cofactor and be involved in the regulation of DNA transcription and replication. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2008] |
RNU7-86P GeneRNA, U7 small nuclear 86 pseudogene |
NCOR1P2 Genenuclear receptor corepressor 1 pseudogene 2 |
NMTRQ-TTG8-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 8-1 |
RNU7-13P GeneRNA, U7 small nuclear 13 pseudogene |
RNU6-36P GeneRNA, U6 small nuclear 36, pseudogene |
RNU4ATAC2P GeneRNA, U4atac small nuclear 2, pseudogene |
NUS1P4 Genenuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 4 |
NUS1P1 Genenuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 1 |
NUS1P3 Genenuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 3 |
NUS1P2 Genenuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 2 |
HNRNPR Geneheterogeneous nuclear ribonucleoprotein R This gene encodes an RNA-binding protein that is a member of the spliceosome C complex, which functions in pre-mRNA processing and transport. The encoded protein also promotes transcription at the c-fos gene. Alternative splicing results in multiple transcript variants. There are pseudogenes for this gene on chromosomes 4, 11, and 10. [provided by RefSeq, Jul 2014] |
RNU6-64P GeneRNA, U6 small nuclear 64, pseudogene |
HNRNPL Geneheterogeneous nuclear ribonucleoprotein L Heterogeneous nuclear RNAs (hnRNAs) which include mRNA precursors and mature mRNAs are associated with specific proteins to form heterogenous ribonucleoprotein (hnRNP) complexes. Heterogeneous nuclear ribonucleoprotein L is among the proteins that are stably associated with hnRNP complexes and along with other hnRNP proteins is likely to play a major role in the formation, packaging, processing, and function of mRNA. Heterogeneous nuclear ribonucleoprotein L is present in the nucleoplasm as part of the HNRP complex. HNRP proteins have also been identified outside of the nucleoplasm. Exchange of hnRNP for mRNA-binding proteins accompanies transport of mRNA from the nucleus to the cytoplasm. Since HNRP proteins have been shown to shuttle between the nucleus and the cytoplasm, it is possible that they also have cytoplasmic functions. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
SNRNP200 Genesmall nuclear ribonucleoprotein 200kDa (U5) Pre-mRNA splicing is catalyzed by the spliceosome, a complex of specialized RNA and protein subunits that removes introns from a transcribed pre-mRNA segment. The spliceosome consists of small nuclear RNA proteins (snRNPs) U1, U2, U4, U5 and U6, together with approximately 80 conserved proteins. U5 snRNP contains nine specific proteins. This gene encodes one of the U5 snRNP-specific proteins. This protein belongs to the DEXH-box family of putative RNA helicases. It is a core component of U4/U6-U5 snRNPs and appears to catalyze an ATP-dependent unwinding of U4/U6 RNA duplices. Mutations in this gene cause autosomal-dominant retinitis pigmentosa. Alternatively spliced transcript variants encoding different isoforms have been found, but the full-length nature of these variants has not been determined. [provided by RefSeq, Mar 2010] |
HNRNPDP1 Geneheterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) pseudogene 1 |
LOC101060637 Genenuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like |
PABPN1L Genepoly(A) binding protein, nuclear 1-like (cytoplasmic) Predicted to enable poly(A) binding activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay. Predicted to act upstream of or within maternal-to-zygotic transition of gene expression; negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process; and negative regulation of protein ubiquitination. Predicted to be located in cytoplasm. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPH1P2 Geneheterogeneous nuclear ribonucleoprotein H1 pseudogene 2 |
HNRNPH1P3 Geneheterogeneous nuclear ribonucleoprotein H1 pseudogene 3 |
HNRNPH1P1 Geneheterogeneous nuclear ribonucleoprotein H1 pseudogene 1 |
RNU5B-5P GeneRNA, U5B small nuclear 5, pseudogene |
THYN1 Genethymocyte nuclear protein 1 This gene encodes a protein that is highly conserved among vertebrates and plant species and may be involved in the induction of apoptosis. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008] |
RNU6-63P GeneRNA, U6 small nuclear 63, pseudogene |
RNU7-54P GeneRNA, U7 small nuclear 54 pseudogene |
RNU5A-2P GeneRNA, U5A small nuclear 2, pseudogene |
LOC100420944 Genenuclear transcription factor Y, beta pseudogene |
NMTRQ-TTG2-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 2-1 |
LOC102724426 GeneSjoegren syndrome nuclear autoantigen 1 homolog |
NFKB1 Genenuclear factor of kappa light polypeptide gene enhancer in B-cells 1 This gene encodes a 105 kD protein which can undergo cotranslational processing by the 26S proteasome to produce a 50 kD protein. The 105 kD protein is a Rel protein-specific transcription inhibitor and the 50 kD protein is a DNA binding subunit of the NF-kappa-B (NFKB) protein complex. NFKB is a transcription regulator that is activated by various intra- and extra-cellular stimuli such as cytokines, oxidant-free radicals, ultraviolet irradiation, and bacterial or viral products. Activated NFKB translocates into the nucleus and stimulates the expression of genes involved in a wide variety of biological functions. Inappropriate activation of NFKB has been associated with a number of inflammatory diseases while persistent inhibition of NFKB leads to inappropriate immune cell development or delayed cell growth. NFKB is a critical regulator of the immediate-early response to viral infection. Alternative splicing results in multiple transcript variants encoding different isoforms, at least one of which is proteolytically processed. [provided by RefSeq, Aug 2020] |
NFKB2 Genenuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) This gene encodes a subunit of the transcription factor complex nuclear factor-kappa-B (NFkB). The NFkB complex is expressed in numerous cell types and functions as a central activator of genes involved in inflammation and immune function. The protein encoded by this gene can function as both a transcriptional activator or repressor depending on its dimerization partner. The p100 full-length protein is co-translationally processed into a p52 active form. Chromosomal rearrangements and translocations of this locus have been observed in B cell lymphomas, some of which may result in the formation of fusion proteins. There is a pseudogene for this gene on chromosome 18. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2013] |
RNU7-32P GeneRNA, U7 small nuclear 32 pseudogene |
BLZF2P Genebasic leucine zipper nuclear factor 2 pseudogene |
NFATC1 Genenuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 The product of this gene is a component of the nuclear factor of activated T cells DNA-binding transcription complex. This complex consists of at least two components: a preexisting cytosolic component that translocates to the nucleus upon T cell receptor (TCR) stimulation, and an inducible nuclear component. Proteins belonging to this family of transcription factors play a central role in inducible gene transcription during immune response. The product of this gene is an inducible nuclear component. It functions as a major molecular target for the immunosuppressive drugs such as cyclosporin A. Multiple alternatively spliced transcript variants encoding distinct isoforms have been identified for this gene. Different isoforms of this protein may regulate inducible expression of different cytokine genes. [provided by RefSeq, Jul 2013] |
NFATC2 Genenuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 This gene is a member of the nuclear factor of activated T cells (NFAT) family. The product of this gene is a DNA-binding protein with a REL-homology region (RHR) and an NFAT-homology region (NHR). This protein is present in the cytosol and only translocates to the nucleus upon T cell receptor (TCR) stimulation, where it becomes a member of the nuclear factors of activated T cells transcription complex. This complex plays a central role in inducing gene transcription during the immune response. Alternate transcriptional splice variants encoding different isoforms have been characterized. [provided by RefSeq, Apr 2012] |
NFATC4 Genenuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 This gene encodes a member of the nuclear factor of activated T cells (NFAT) protein family. The encoded protein is part of a DNA-binding transcription complex. This complex consists of at least two components: a preexisting cytosolic component that translocates to the nucleus upon T cell receptor stimulation and an inducible nuclear component. NFAT proteins are activated by the calmodulin-dependent phosphatase, calcineurin. The encoded protein plays a role in the inducible expression of cytokine genes in T cells, especially in the induction of interleukin-2 and interleukin-4. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014] |
NRIP1 Genenuclear receptor interacting protein 1 Nuclear receptor interacting protein 1 (NRIP1) is a nuclear protein that specifically interacts with the hormone-dependent activation domain AF2 of nuclear receptors. Also known as RIP140, this protein modulates transcriptional activity of the estrogen receptor. [provided by RefSeq, Jul 2008] |
NRIP2 Genenuclear receptor interacting protein 2 Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to act upstream of or within Notch signaling pathway and negative regulation of transcription by RNA polymerase II. Located in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
NRIP3 Genenuclear receptor interacting protein 3 Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420758 Genepoly(A) binding protein, nuclear 1 pseudogene |
RNU7-33P GeneRNA, U7 small nuclear 33 pseudogene |
RNU5D-2P GeneRNA, U5D small nuclear 2, pseudogene |
ANP32BP2 Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member B pseudogene 2 |
ANP32F Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member F |
ANP32D Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member D Phosphoprotein 32 (PP32) is a tumor suppressor that can inhibit several types of cancers, including prostate and breast cancers. The protein encoded by this gene is one of at least two proteins that are similar in amino acid sequence to PP32 and are part of the same acidic nuclear phosphoprotein gene family. However, unlike PP32, the encoded protein is tumorigenic. The tumor suppressor function of PP32 has been localized to a 25 amino acid region that is absent in the protein encoded by this gene. This gene does not contain introns. [provided by RefSeq, Jul 2008] |
ANP32E Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member E Enables histone binding activity; histone chaperone activity; and protein folding chaperone. Predicted to be involved in regulation of apoptotic process. Located in nucleus. Part of Swr1 complex. [provided by Alliance of Genome Resources, Mar 2025] |
ANP32B Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member B Enables RNA polymerase binding activity and histone binding activity. Involved in several processes, including nucleosome assembly; positive regulation of cysteine-type endopeptidase activity; and positive regulation of protein export from nucleus. Located in cytoplasm; nucleolus; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
ANP32C Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member C Predicted to enable histone binding activity. Predicted to be involved in nucleocytoplasmic transport and regulation of apoptotic process. Predicted to be active in nucleus and perinuclear region of cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
ANP32A Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member A Enables RNA binding activity. Involved in nucleocytoplasmic transport. Located in endoplasmic reticulum; nucleus; and perinuclear region of cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420515 GeneCTD nuclear envelope phosphatase 1 pseudogene |
CSRNP1 Genecysteine-serine-rich nuclear protein 1 This gene encodes a protein that localizes to the nucleus and expression of this gene is induced in response to elevated levels of axin. The Wnt signalling pathway, which is negatively regulated by axin, is important in axis formation in early development and impaired regulation of this signalling pathway is often involved in tumors. A decreased level of expression of this gene in tumors compared to the level of expression in their corresponding normal tissues suggests that this gene product has a tumor suppressor function. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016] |
CSRNP2 Genecysteine-serine-rich nuclear protein 2 The protein encoded by this gene belongs to the CSRNP family of nuclear proteins that share conserved regions, including cysteine- and serine- rich regions, a basic domain, a transcriptional activation domain, and bind the sequence 'AGAGTG', thus have the hallmark of transcription factors. Studies in mice suggest that these genes may have redundant functions. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Aug 2011] |
CSRNP3 Genecysteine-serine-rich nuclear protein 3 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in positive regulation of apoptotic process and positive regulation of transcription by RNA polymerase II. Predicted to be located in chromatin. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
NUPR1 Genenuclear protein, transcriptional regulator, 1 Enables DNA binding activity and transcription coactivator activity. Involved in several processes, including negative regulation of programmed cell death; positive regulation of oxidative phosphorylation; and regulation of catabolic process. Acts upstream of or within negative regulation of cell cycle. Located in intercellular bridge; nucleoplasm; and perinuclear region of cytoplasm. Part of protein-DNA complex. [provided by Alliance of Genome Resources, Mar 2025] |
NASP Genenuclear autoantigenic sperm protein (histone-binding) This gene encodes a H1 histone binding protein that is involved in transporting histones into the nucleus of dividing cells. Multiple isoforms are encoded by transcript variants of this gene. The somatic form is expressed in all mitotic cells, is localized to the nucleus, and is coupled to the cell cycle. The testicular form is expressed in embryonic tissues, tumor cells, and the testis. In male germ cells, this protein is localized to the cytoplasm of primary spermatocytes, the nucleus of spermatids, and the periacrosomal region of mature spermatozoa. [provided by RefSeq, Jul 2008] |
RNU6-76P GeneRNA, U6 small nuclear 76, pseudogene |
RNU7-27P GeneRNA, U7 small nuclear 27 pseudogene |
SNRPCP9 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 9 |
SNRPCP8 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 8 |
SNRPCP3 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 3 |
SNRPCP2 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 2 |
SNRPCP7 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 7 |
SNRPCP4 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 4 |
SNAPC3 Genesmall nuclear RNA activating complex, polypeptide 3, 50kDa Predicted to enable RNA polymerase III type 3 promoter sequence-specific DNA binding activity and bent DNA binding activity. Predicted to contribute to RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and core promoter sequence-specific DNA binding activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Located in nuclear body and nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
SNAPC2 Genesmall nuclear RNA activating complex, polypeptide 2, 45kDa This gene encodes a subunit of the snRNA-activating protein complex which is associated with the TATA box-binding protein. The encoded protein is necessary for RNA polymerase II and III dependent small-nuclear RNA gene transcription. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2009] |
SNAPC1 Genesmall nuclear RNA activating complex, polypeptide 1, 43kDa Predicted to enable sequence-specific DNA binding activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Located in nucleolus and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
SNAPC5 Genesmall nuclear RNA activating complex, polypeptide 5, 19kDa This gene encodes a subunit of the small nuclear RNA (snRNA)-activating protein complex that plays a role in the transcription of snRNA genes. This complex binds to the promoters of snRNA genes transcribed by either RNA polymerase II or III and recruits other regulatory factors to activate snRNA gene transcription. The encoded protein may play a role in stabilizing this complex. A pseudogene of this gene has been identified on chromosome 6. [provided by RefSeq, Jul 2016] |
SNAPC4 Genesmall nuclear RNA activating complex, polypeptide 4, 190kDa This gene encodes the largest subunit of the small nuclear RNA-activating protein (SNAP) complex. The encoded protein contains a Myb DNA-binding domain, and is essential for RNA polymerase II and III polymerase transcription from small nuclear RNA promoters. A mutation in this gene is associated with ankylosing spondylitis. [provided by RefSeq, Jul 2016] |
LOC105372267 Genenuclear factor interleukin-3-regulated protein-like Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in circadian rhythm and regulation of DNA-templated transcription. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-21P GeneRNA, U6 small nuclear 21, pseudogene |
NUS1 Genenuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) This gene encodes a type I single transmembrane domain receptor, which is a subunit of cis-prenyltransferase, and serves as a specific receptor for the neural and cardiovascular regulator Nogo-B. The encoded protein is essential for dolichol synthesis and protein glycosylation. This gene is highly expressed in non-small cell lung carcinomas as well as estrogen receptor-alpha positive breast cancer cells where it promotes epithelial mesenchymal transition. This gene is associated with the poor prognosis of human hepatocellular carcinoma patients. Naturally occurring mutations in this gene cause a congenital disorder of glycosylation and are associated with epilepsy. A knockout of the orthologous gene in mice causes embryonic lethality before day 6.5. Pseudogenes of this gene have been defined on chromosomes 13 and X. [provided by RefSeq, May 2017] |
RNU2-3P GeneRNA, U2 small nuclear 3, pseudogene |
HNRNPA1P5 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 5 |
HNRNPA1P4 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 4 |
HNRNPA1P7 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 7 |
HNRNPA1P1 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 1 |
HNRNPA1P3 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 3 |
HNRNPA1P2 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 2 |
HNRNPA1P9 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 9 |
HNRNPA1P8 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 8 |
RNU7-75P GeneRNA, U7 small nuclear 75 pseudogene |
RNU7-4P GeneRNA, U7 small nuclear 4 pseudogene |
RN7SKP1 GeneRNA, 7SK small nuclear pseudogene 1 |
RNU5A-8P GeneRNA, U5A small nuclear 8, pseudogene |
HNRNPU Geneheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) This gene encodes a member of a family of proteins that bind nucleic acids and function in the formation of ribonucleoprotein complexes in the nucleus with heterogeneous nuclear RNA (hnRNA). The encoded protein has affinity for both RNA and DNA, and binds scaffold-attached region (SAR) DNA. Mutations in this gene have been associated with epileptic encephalopathy, early infantile, 54. A pseudogene of this gene has been identified on chromosome 14. [provided by RefSeq, Jun 2017] |
HNRNPK Geneheterogeneous nuclear ribonucleoprotein K This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene is located in the nucleoplasm and has three repeats of KH domains that binds to RNAs. It is distinct among other hnRNP proteins in its binding preference; it binds tenaciously to poly(C). This protein is also thought to have a role during cell cycle progession. Several alternatively spliced transcript variants have been described for this gene, however, not all of them are fully characterized. [provided by RefSeq, Jul 2008] |
HNRNPM Geneheterogeneous nuclear ribonucleoprotein M This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has three repeats of quasi-RRM domains that bind to RNAs. This protein also constitutes a monomer of the N-acetylglucosamine-specific receptor which is postulated to trigger selective recycling of immature GlcNAc-bearing thyroglobulin molecules. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2011] |
HNRNPC Geneheterogeneous nuclear ribonucleoprotein C (C1/C2) This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene can act as a tetramer and is involved in the assembly of 40S hnRNP particles. Multiple transcript variants encoding at least two different isoforms have been described for this gene. [provided by RefSeq, Jul 2008] |
HNRNPD Geneheterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are nucleic acid binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two repeats of quasi-RRM domains that bind to RNAs. It localizes to both the nucleus and the cytoplasm. This protein is implicated in the regulation of mRNA stability. Alternative splicing of this gene results in four transcript variants. [provided by RefSeq, Jul 2008] |
HNRNPF Geneheterogeneous nuclear ribonucleoprotein F This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins that complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and regulate alternative splicing, polyadenylation, and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has three repeats of quasi-RRM domains that bind to RNAs which have guanosine-rich sequences. This protein is very similar to the family member hnRPH. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008] |
RNU6-53P GeneRNA, U6 small nuclear 53, pseudogene |
NMTRQ-TTG3-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 3-1 |
RNU6-39P GeneRNA, U6 small nuclear 39, pseudogene |
RNU5F-6P GeneRNA, U5F small nuclear 6, pseudogene |
LOC100130466 Genenuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like |
ANP32BP1 Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member B pseudogene 1 |
CTRCT35 Genecataract, congenital nuclear, autosomal recessive |
RNU4-4P GeneRNA, U4 small nuclear 4, pseudogene |
NMTRQ-TTG12-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 12-1 |
RNU6-83P GeneRNA, U6 small nuclear 83, pseudogene |
NRM Genenurim (nuclear envelope membrane protein) The protein encoded by this gene contains transmembrane domains and resides within the inner nuclear membrane, where it is tightly associated with the nucleus. This protein shares homology with isoprenylcysteine carboxymethyltransferase enzymes. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Jul 2012] |
RNU1-27P GeneRNA, U1 small nuclear 27, pseudogene |
RNU6-48P GeneRNA, U6 small nuclear 48, pseudogene |
RNU1-18P GeneRNA, U1 small nuclear 18, pseudogene |
RNU2-1 GeneRNA, U2 small nuclear 1 The spliceosome is a multicomponent ribonucleoprotein complex that catalyzes the removal of introns from nuclear mRNA precursors. The spliceosome is composed of four small ribonucleoprotein particles (the U1, U2, and U4/U6 snRNPs) and numerous additional proteins. The U2 small nuclear RNA (snRNA) is a RNA component of the U2 snRNP that interacts with the 3' region of the intron at the branch site. Several sites in the human genome express U2 snRNAs. This locus represents an array of U2 snRNA genes located at 17q21-22 that undergoes concerted evolution to homogenize repeat units within the array. Each repeat in this array is approximately 6.1 kb long and contains a single copy of the U2 snRNA. Arrays of six to more than 30 repeats have been reported. [provided by RefSeq, Mar 2009] |
RNU7-42P GeneRNA, U7 small nuclear 42 pseudogene |
NR2C2AP Genenuclear receptor 2C2-associated protein Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-85P GeneRNA, U7 small nuclear 85 pseudogene |
LOC100132229 Genenuclear pore associated protein 1 pseudogene |
RNU7-28P GeneRNA, U7 small nuclear 28 pseudogene |
RNU7-65P GeneRNA, U7 small nuclear 65 pseudogene |
RNU7-38P GeneRNA, U7 small nuclear 38 pseudogene |
NPIPP1 Genenuclear pore complex interacting protein pseudogene 1 |
LOC105378245 Geneheterogeneous nuclear ribonucleoprotein A1-like |
HNRNPA1P19 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 19 |
HNRNPA1P18 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 18 |
HNRNPA1P15 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 15 |
HNRNPA1P14 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 14 |
HNRNPA1P17 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 17 |
HNRNPA1P16 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 16 |
HNRNPA1P11 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 11 |
HNRNPA1P10 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 10 |
HNRNPA1P13 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 13 |
HNRNPA1P12 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 12 |
SYNE1 Genespectrin repeat containing, nuclear envelope 1 This gene encodes a spectrin repeat containing protein expressed in skeletal and smooth muscle, and peripheral blood lymphocytes, that localizes to the nuclear membrane. Mutations in this gene have been associated with autosomal recessive spinocerebellar ataxia 8, also referred to as autosomal recessive cerebellar ataxia type 1 or recessive ataxia of Beauce. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008] |
SYNE2 Genespectrin repeat containing, nuclear envelope 2 The protein encoded by this gene is a nuclear outer membrane protein that binds cytoplasmic F-actin. This binding tethers the nucleus to the cytoskeleton and aids in the maintenance of the structural integrity of the nucleus. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2009] |
SYNE3 Genespectrin repeat containing, nuclear envelope family member 3 Enables actin filament binding activity and cytoskeleton-nuclear membrane anchor activity. Involved in cytoskeleton organization; establishment of protein localization to membrane; and regulation of cell shape. Located in nuclear membrane. Part of meiotic nuclear membrane microtubule tethering complex. Biomarker of Huntington's disease. [provided by Alliance of Genome Resources, Mar 2025] |
SYNE4 Genespectrin repeat containing, nuclear envelope family member 4 This gene is a member of the nesprin family of genes, that encode KASH (Klarsicht, Anc-1, Syne Homology) domain-containing proteins. In addition to the KASH domain, this protein also contains a coiled-coil and leucine zipper region, a spectrin repeat, and a kinesin-1 binding region. This protein localizes to the outer nuclear membrane, and is part of the linker of nucleoskeleton and cytoskeleton (LINC) complex in the nuclear envelope. LINC complexes are formed by SUN (Sad1, UNC-84)-KASH pairs, and are thought to mechanically couple nuclear components to the cytoskeleton. Mutations in this gene have been associated with progressive high-frequency hearing loss. The absence of this protein in mice also caused hearing loss, and changes in hair cell morphology in the ears. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Aug 2015] |
NMTRS-TGA2-1 Genenuclear-encoded mitochondrial transfer RNA-Ser (TGA) 2-1 |
ARNTL Genearyl hydrocarbon receptor nuclear translocator-like The protein encoded by this gene is a basic helix-loop-helix protein that forms a heterodimer with CLOCK. This heterodimer binds E-box enhancer elements upstream of Period (PER1, PER2, PER3) and Cryptochrome (CRY1, CRY2) genes and activates transcription of these genes. PER and CRY proteins heterodimerize and repress their own transcription by interacting in a feedback loop with CLOCK/ARNTL complexes. Defects in this gene have been linked to infertility, problems with gluconeogenesis and lipogenesis, and altered sleep patterns. The protein regulates interferon-stimulated gene expression and is an important factor in viral infection, including COVID-19. [provided by RefSeq, Oct 2021] |
NPIP Genenuclear pore complex interacting protein family, member A1 pseudogene |
ARNT2 Genearyl-hydrocarbon receptor nuclear translocator 2 This gene encodes a member of the basic-helix-loop-helix-Per-Arnt-Sim (bHLH-PAS) superfamily of transcription factors. The encoded protein acts as a partner for several sensor proteins of the bHLH-PAS family, forming heterodimers with the sensor proteins that bind regulatory DNA sequences in genes responsive to developmental and environmental stimuli. Under hypoxic conditions, the encoded protein complexes with hypoxia-inducible factor 1alpha in the nucleus and this complex binds to hypoxia-responsive elements in enhancers and promoters of oxygen-responsive genes. A highly similar protein in mouse forms functional complexes with both aryl hydrocarbon receptors and Single-minded proteins, suggesting additional roles for the encoded protein in the metabolism of xenobiotic compounds and the regulation of neurogenesis, respectively. [provided by RefSeq, Dec 2013] |
LOC100421673 Genesmall nuclear ribonucleoprotein polypeptide B pseudogene |
LOC100421672 Genesmall nuclear ribonucleoprotein polypeptide B pseudogene |
NAF1 Genenuclear assembly factor 1 ribonucleoprotein Enables identical protein binding activity and telomerase RNA binding activity. Involved in ribosome biogenesis; telomerase RNA stabilization; and telomerase holoenzyme complex assembly. Acts upstream of or within telomerase RNA localization to Cajal body. Located in cytoplasm and nucleoplasm. Part of sno(s)RNA-containing ribonucleoprotein complex. Implicated in melanoma. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPA1P48 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 48 Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of catalytic step 2 spliceosome. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-66P GeneRNA, U6 small nuclear 66, pseudogene |
HNF4GP1 Genehepatocyte nuclear factor 4, gamma pseudogene 1 |
LOC100506654 Genegem (nuclear organelle) associated protein 7 pseudogene |
RNU7-8P GeneRNA, U7 small nuclear 8 pseudogene |
LOC100820734 GeneLSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene |
RNU7-14P GeneRNA, U7 small nuclear 14 pseudogene |
HNRNPMP2 Geneheterogeneous nuclear ribonucleoprotein M pseudogene 2 |
HNRNPMP1 Geneheterogeneous nuclear ribonucleoprotein M pseudogene 1 |
NRBF2P4 Genenuclear receptor binding factor 2 pseudogene 4 |
LOC729200 Genesmall nuclear ribonucleoprotein polypeptide B pseudogene |
NMTRQ-TTG6-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 6-1 |
RNVU1-17 GeneRNA, variant U1 small nuclear 17 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-14 GeneRNA, variant U1 small nuclear 14 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-15 GeneRNA, variant U1 small nuclear 15 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-11 GeneRNA, variant U1 small nuclear 11 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-18 GeneRNA, variant U1 small nuclear 18 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-19 GeneRNA, variant U1 small nuclear 19 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-30P GeneRNA, U7 small nuclear 30 pseudogene |
NAIF1 Genenuclear apoptosis inducing factor 1 Involved in negative regulation of cell growth and regulation of mitochondrial membrane permeability involved in apoptotic process. Located in cytosol; nucleoplasm; and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100422717 Genepterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 pseudogene |
NPAT Genenuclear protein, ataxia-telangiectasia locus Enables transcription coactivator activity and transcription corepressor activity. Involved in cell cycle G1/S phase transition and positive regulation of transcription by RNA polymerase II. Located in Cajal body; Gemini of coiled bodies; and cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
SNAPC5P1 Genesmall nuclear RNA activating complex, polypeptide 5, 19kDa pseudogene 1 |
SNRPGP13 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 13 |
SNRPGP12 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 12 |
SNRPGP11 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 11 |
SNRPGP14 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 14 |
RNU5E-8P GeneRNA, U5E small nuclear 8, pseudogene |
LOC100421023 Genenuclear transcription factor Y, gamma pseudogene |
RNU7-51P GeneRNA, U7 small nuclear 51 pseudogene |
NMTRQ-TTG13-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 13-1 |
C1DP2 GeneC1D nuclear receptor corepressor pseudogene 2 |
NPIPB15 Genenuclear pore complex interacting protein family, member B15 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
NUFIP2 Genenuclear fragile X mental retardation protein interacting protein 2 Enables RNA binding activity. Located in several cellular components, including cytoplasmic stress granule; nuclear body; and ribosome. [provided by Alliance of Genome Resources, Mar 2025] |
NUFIP1 Genenuclear fragile X mental retardation protein interacting protein 1 This gene encodes a nuclear RNA binding protein that contains a C2H2 zinc finger motif and a nuclear localization signal. This protein is associated with the nuclear matrix in perichromatin fibrils and, in neurons, localizes to the cytoplasm in association with endoplasmic reticulum ribosomes. This protein interacts with the fragile X mental retardation protein (FMRP), the tumor suppressor protein BRCA1, upregulates RNA polymerase II transcription, and is involved in box C/D snoRNP biogenesis. A pseudogene of this gene resides on chromosome 6q12. [provided by RefSeq, Feb 2012] |
ANP32AP1 Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member A pseudogene 1 |
HNRNPA1P54 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 54 |
HNRNPA1P56 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 56 |
NR3C1P1 Genenuclear receptor subfamily 3, group C, member 1 pseudogene 1 |
LOC100421894 Geneexportin, tRNA (nuclear export receptor for tRNAs) pseudogene |
NSD1 Genenuclear receptor binding SET domain protein 1 This gene encodes a protein containing a SET domain, 2 LXXLL motifs, 3 nuclear translocation signals (NLSs), 4 plant homeodomain (PHD) finger regions, and a proline-rich region. The encoded protein enhances androgen receptor (AR) transactivation, and this enhancement can be increased further in the presence of other androgen receptor associated coregulators. This protein may act as a nucleus-localized, basic transcriptional factor and also as a bifunctional transcriptional regulator. Mutations of this gene have been associated with Sotos syndrome and Weaver syndrome. One version of childhood acute myeloid leukemia is the result of a cryptic translocation with the breakpoints occurring within nuclear receptor-binding Su-var, enhancer of zeste, and trithorax domain protein 1 on chromosome 5 and nucleoporin, 98-kd on chromosome 11. Multiple transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Sep 2018] |
RNU6-15P GeneRNA, U6 small nuclear 15, pseudogene |
RNU2-4P GeneRNA, U2 small nuclear 4, pseudogene |
RNU1-15P GeneRNA, U1 small nuclear 15, pseudogene |
RNU5F-4P GeneRNA, U5F small nuclear 4, pseudogene |
RNU6ATAC3P GeneRNA, U6atac small nuclear 3, pseudogene |
NMTRV-TAC1-1 Genenuclear-encoded mitochondrial transfer RNA-Val (TAC) 1-1 |
NFATC2IP Genenuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-72P GeneRNA, U7 small nuclear 72 pseudogene |
NMTRL-TAA4-1 Genenuclear-encoded mitochondrial transfer RNA-Leu (TAA) 4-1 |
RNU6-56P GeneRNA, U6 small nuclear 56, pseudogene |
SNRPGP8 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 8 |
HNRNPA1P77 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 77 |
LOC100130180 Genenuclear factor, erythroid 2-like 3 pseudogene |
LOC100288853 Genepoly(A) binding protein, nuclear 1 pseudogene |
NMTRL-TAA5-1 Genenuclear-encoded mitochondrial transfer RNA-Leu (TAA) 5-1 |
MINA GeneMYC induced nuclear antigen MINA is a c-Myc (MYC; MIM 190080) target gene that may play a role in cell proliferation or regulation of cell growth. (Tsuneoka et al., 2002 [PubMed 12091391]; Zhang et al., 2005 [PubMed 15897898]).[supplied by OMIM, May 2008] |
RNU4-9P GeneRNA, U4 small nuclear 9, pseudogene |
NMTRQ-TTG7-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 7-1 |
RNU6-71P GeneRNA, U6 small nuclear 71, pseudogene |
RNU7-22P GeneRNA, U7 small nuclear 22 pseudogene |
SNRPB2 Genesmall nuclear ribonucleoprotein polypeptide B The protein encoded by this gene associates with stem loop IV of U2 small nuclear ribonucleoprotein (U2 snRNP) in the presence of snRNP-A'. The encoded protein may play a role in pre-mRNA splicing. Autoantibodies from patients with systemic lupus erythematosus frequently recognize epitopes on the encoded protein. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008] |
RNU7-59P GeneRNA, U7 small nuclear 59 pseudogene |
EIF4ENIF1 Geneeukaryotic translation initiation factor 4E nuclear import factor 1 The protein encoded by this gene is a nucleocytoplasmic shuttle protein for the translation initiation factor eIF4E. This shuttle protein interacts with the importin alpha-beta complex to mediate nuclear import of eIF4E. It is predominantly cytoplasmic; its own nuclear import is regulated by a nuclear localization signal and nuclear export signals. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2009] |
RNU6-26P GeneRNA, U6 small nuclear 26, pseudogene |
RNU6-10P GeneRNA, U6 small nuclear 10, pseudogene |
LOC100422493 Generequired for meiotic nuclear division 1 homolog (S. cerevisiae) pseudogene |
RNU7-41P GeneRNA, U7 small nuclear 41 pseudogene |
RNU6ATAC4P GeneRNA, U6atac small nuclear 4, pseudogene |
RNU1-3 GeneRNA, U1 small nuclear 3 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU1-2 GeneRNA, U1 small nuclear 2 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-31P GeneRNA, U6 small nuclear 31, pseudogene |
LOC440353 Genenuclear pore complex interacting protein family, member A1 pseudogene Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPCP9 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 9 |
HNRNPCP8 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 8 |
HNRNPCP7 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 7 |
HNRNPCP6 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 6 |
HNRNPCP1 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 1 |
HNRNPCP3 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 3 |
SP100 GeneSP100 nuclear antigen This gene encodes a subnuclear organelle and major component of the PML (promyelocytic leukemia)-SP100 nuclear bodies. PML and SP100 are covalently modified by the SUMO-1 modifier, which is considered crucial to nuclear body interactions. The encoded protein binds heterochromatin proteins and is thought to play a role in tumorigenesis, immunity, and gene regulation. Alternatively spliced variants have been identified for this gene; one of which encodes a high-mobility group protein. [provided by RefSeq, Aug 2011] |
NRBP2 Genenuclear receptor binding protein 2 Predicted to enable protein serine/threonine kinase activity. Involved in negative regulation of macroautophagy. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
NRBP1 Genenuclear receptor binding protein 1 Predicted to enable protein homodimerization activity and protein serine/threonine kinase activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Located in endomembrane system. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-60P GeneRNA, U7 small nuclear 60 pseudogene |
HNRNPA1P64 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 64 |
HNRNPA1P66 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 66 |
HNRNPA1P67 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 67 |
HNRNPA1P60 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 60 |
HNRNPA1P61 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 61 |
NR2E1 Genenuclear receptor subfamily 2, group E, member 1 The protein encoded by this gene is an orphan receptor involved in retinal development. The encoded protein also regulates adult neural stem cell proliferation and may be involved in control of aggressive behavior. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2015] |
NR2E3 Genenuclear receptor subfamily 2, group E, member 3 This protein is part of a large family of nuclear receptor transcription factors involved in signaling pathways. Nuclear receptors have been shown to regulate pathways involved in embryonic development, as well as in maintenance of proper cell function in adults. Members of this family are characterized by discrete domains that function in DNA and ligand binding. This gene encodes a retinal nuclear receptor that is a ligand-dependent transcription factor. Defects in this gene are a cause of enhanced S cone syndrome. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008] |
LOC441722 GeneU2 small nuclear RNA auxiliary factor 1-like 4 pseudogene |
RNU5B-3P GeneRNA, U5B small nuclear 3, pseudogene |
SNRNP40 Genesmall nuclear ribonucleoprotein 40kDa (U5) This gene encodes a component of the U5 small nuclear ribonucleoprotein (snRNP) particle. The U5 snRNP is part of the spliceosome, a multiprotein complex that catalyzes the removal of introns from pre-messenger RNAs. [provided by RefSeq, Jul 2008] |
SNRNP48 Genesmall nuclear ribonucleoprotein 48kDa (U11/U12) Predicted to enable metal ion binding activity. Predicted to be involved in RNA splicing. Located in cytosol and nucleoplasm. Part of U12-type spliceosomal complex. [provided by Alliance of Genome Resources, Mar 2025] |
NFAT5 Genenuclear factor of activated T-cells 5, tonicity-responsive The product of this gene is a member of the nuclear factors of activated T cells family of transcription factors. Proteins belonging to this family play a central role in inducible gene transcription during the immune response. This protein regulates gene expression induced by osmotic stress in mammalian cells. Unlike monomeric members of this protein family, this protein exists as a homodimer and forms stable dimers with DNA elements. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
RNU1-22P GeneRNA, U1 small nuclear 22, pseudogene |
GEMIN7 Genegem (nuclear organelle) associated protein 7 The protein encoded by this gene is a component of the core SMN complex, which is required for pre-mRNA splicing in the nucleus. The encoded protein is found in the nucleoplasm, in nuclear `gems` (Gemini of Cajal bodies), and in the cytoplasm. Three transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008] |
RN7SKP8 GeneRNA, 7SK small nuclear pseudogene 8 |
RN7SKP9 GeneRNA, 7SK small nuclear pseudogene 9 |
RN7SKP6 GeneRNA, 7SK small nuclear pseudogene 6 |
RN7SKP7 GeneRNA, 7SK small nuclear pseudogene 7 |
RN7SKP4 GeneRNA, 7SK small nuclear pseudogene 4 |
RN7SKP5 GeneRNA, 7SK small nuclear pseudogene 5 |
RN7SKP2 GeneRNA, 7SK small nuclear pseudogene 2 |
RN7SKP3 GeneRNA, 7SK small nuclear pseudogene 3 |
RPRD1A Generegulation of nuclear pre-mRNA domain containing 1A This gene encodes a cell-cycle and transcription regulatory protein. The encoded protein interacts with the cell cycle inhibitor cyclin-dependent kinase 4 inhibitor B and may function as a negative regulator of G(1)/S phase progression. This protein also forms homo- and hetrodimers with the protein, regulation of nuclear pre-mRNA domain-containing protein 1B, to form a scaffold that interacts with the C-terminal domain of RNA polymerase II subunit B1 and regulates several aspects of transcription. Alternate splicing results in multiple transcript variants. A pseudogene of this gene is found on chromosome 16. [provided by RefSeq, Dec 2014] |
RPRD1B Generegulation of nuclear pre-mRNA domain containing 1B Enables RNA polymerase II complex binding activity and identical protein binding activity. Involved in several processes, including RNA polymerase II promoter clearance; positive regulation of cell population proliferation; and positive regulation of transcription by RNA polymerase II. Located in nucleoplasm. Part of transcription preinitiation complex. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-80P GeneRNA, U7 small nuclear 80 pseudogene |
NPAP1P1 Genenuclear pore associated protein 1 pseudogene 1 |
NPAP1P3 Genenuclear pore associated protein 1 pseudogene 3 |
NPAP1P2 Genenuclear pore associated protein 1 pseudogene 2 |
NPAP1P4 Genenuclear pore associated protein 1 pseudogene 4 |
NPAP1P6 Genenuclear pore associated protein 1 pseudogene 6 |
NPAP1P8 Genenuclear pore associated protein 1 pseudogene 8 |
PCNPP3 GenePEST containing nuclear protein pseudogene 3 |
PCNPP1 GenePEST containing nuclear protein pseudogene 1 |
PCNPP5 GenePEST containing nuclear protein pseudogene 5 |
PCNPP4 GenePEST containing nuclear protein pseudogene 4 |
RNU7-11P GeneRNA, U7 small nuclear 11 pseudogene |
RNU7-35P GeneRNA, U7 small nuclear 35 pseudogene |
RNU7-68P GeneRNA, U7 small nuclear 68 pseudogene |
LOC729497 Genenuclear receptor coactivator 4 pseudogene |
LOC440973 Genenuclear transcription factor Y, beta pseudogene |
NUPR1L Genenuclear protein, transcriptional regulator, 1-like Involved in several processes, including cellular response to starvation; negative regulation of cell population proliferation; and negative regulation of transcription by RNA polymerase II. Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-52P GeneRNA, U7 small nuclear 52 pseudogene |
RNU5A-4P GeneRNA, U5A small nuclear 4, pseudogene |
GEMIN8 Genegem (nuclear organelle) associated protein 8 The protein encoded by this gene is part of the SMN complex, which is necessary for spliceosomal snRNP assembly in the cytoplasm and pre-mRNA splicing in the nucleus. The encoded protein binds to both SMN1 and the GEMIN6/GEMIN7 heterodimer, mediating their interaction. This protein is found in nuclear Gemini of Cajal bodies (gems) and in the cytoplasm. Three transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, May 2010] |
GEMIN2 Genegem (nuclear organelle) associated protein 2 This gene encodes one of the proteins found in the SMN complex, which consists of several gemin proteins and the protein known as the survival of motor neuron protein. The SMN complex is localized to a subnuclear compartment called gems (gemini of coiled bodies) and is required for assembly of spliceosomal snRNPs and for pre-mRNA splicing. This protein interacts directly with the survival of motor neuron protein and it is required for formation of the SMN complex. A knockout mouse targeting the mouse homolog of this gene exhibited disrupted snRNP assembly and motor neuron degeneration. [provided by RefSeq, Aug 2011] |
GEMIN6 Genegem (nuclear organelle) associated protein 6 GEMIN6 is part of a large macromolecular complex, localized to both the cytoplasm and the nucleus, that plays a role in the cytoplasmic assembly of small nuclear ribonucleoproteins (snRNPs). Other members of this complex include SMN (MIM 600354), GEMIN2 (SIP1; MIM 602595), GEMIN3 (DDX20; MIM 606168), GEMIN4 (MIM 606969), and GEMIN5 (MIM 607005).[supplied by OMIM, Jul 2002] |
GEMIN4 Genegem (nuclear organelle) associated protein 4 The product of this gene is part of a large complex localized to the cytoplasm, nucleoli, and to discrete nuclear bodies called Gemini bodies (gems). The complex functions in spliceosomal snRNP assembly in the cytoplasm, and regenerates spliceosomes required for pre-mRNA splicing in the nucleus. The encoded protein directly interacts with a DEAD box protein and several spliceosome core proteins. Alternatively spliced transcript variants have been described, but their biological validity has not been determined. [provided by RefSeq, Jul 2008] |
GEMIN5 Genegem (nuclear organelle) associated protein 5 This gene encodes a WD repeat protein that is a component of the survival of motor neurons (SMN) complex. The SMN complex plays a critical role in mRNA splicing through the assembly of spliceosomal small nuclear ribonucleoproteins (snRNPs), and may also mediate the assembly and transport of other classes of ribonucleoproteins. The encoded protein is the snRNA-binding component of the SMN complex. Dysregulation of this gene may play a role in alternative mRNA splicing and tumor cell motility. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011] |
RALY GeneRALY heterogeneous nuclear ribonucleoprotein This gene encodes a member of the heterogeneous nuclear ribonucleoprotein (hnRNP) gene family. This protein may play a role in pre-mRNA splicing and in embryonic development. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2011] |
RNU6-45P GeneRNA, U6 small nuclear 45, pseudogene |
NFXL1 Genenuclear transcription factor, X-box binding-like 1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-34P GeneRNA, U6 small nuclear 34, pseudogene |
NXF4 Genenuclear RNA export factor 4 pseudogene |
NXF5 Genenuclear RNA export factor 5 This gene is one member of a family of nuclear RNA export factor genes. Most transcript variants are candidates for nonsense-mediated decay (NMD) and may not express proteins in vivo. [provided by RefSeq, Sep 2022] |
NXF1 Genenuclear RNA export factor 1 This gene is one member of a family of nuclear RNA export factor genes. Common domain features of this family are a noncanonical RNP-type RNA-binding domain (RBD), 4 leucine-rich repeats (LRRs), a nuclear transport factor 2 (NTF2)-like domain that allows heterodimerization with NTF2-related export protein-1 (NXT1), and a ubiquitin-associated domain that mediates interactions with nucleoporins. The LRRs and NTF2-like domains are required for export activity. Alternative splicing seems to be a common mechanism in this gene family. The encoded protein of this gene shuttles between the nucleus and the cytoplasm and binds in vivo to poly(A)+ RNA. It is the vertebrate homologue of the yeast protein Mex67p. The encoded protein overcomes the mRNA export block caused by the presence of saturating amounts of CTE (constitutive transport element) RNA of type D retroviruses. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2008] |
NXF2 Genenuclear RNA export factor 2 This gene encodes a member of a family of nuclear RNA export proteins. The encoded protein is associated with the nuclear envelope and aids in the export of mRNAs. There is a closely related paralog of this gene located adjacent on chromosome X and on the opposite strand. [provided by RefSeq, Aug 2013] |
NXF3 Genenuclear RNA export factor 3 This gene is one member of a family of nuclear RNA export factor genes. Common domain features of this family are a noncanonical RNP-type RNA-binding domain (RBD), 4 leucine-rich repeats (LRRs), a nuclear transport factor 2 (NTF2)-like domain that allows heterodimerization with NTF2-related export protein-1 (NXT1), and a ubiquitin-associated domain that mediates interactions with nucleoporins. The LRRs and NTF2-like domains are required for export activity. Alternative splicing seems to be a common mechanism in this gene family. The encoded protein of this gene has shortened LRR and ubiquitin-associated domains and its RDB is unable to bind RNA. It is located in the nucleoplasm but is not associated with either the nuclear envelope or the nucleolus. [provided by RefSeq, Jul 2008] |
GEMIN8P4 Genegem (nuclear organelle) associated protein 8 pseudogene 4 |
GEMIN8P3 Genegem (nuclear organelle) associated protein 8 pseudogene 3 |
LSM1P1 GeneLSM1, U6 small nuclear RNA associated pseudogene 1 |
RNU6-55P GeneRNA, U6 small nuclear 55, pseudogene |
NPIPB5 Genenuclear pore complex interacting protein family, member B5 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
RNU5F-7P GeneRNA, U5F small nuclear 7, pseudogene Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPH1 Geneheterogeneous nuclear ribonucleoprotein H1 (H) This gene encodes a member of a subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins that complex with heterogeneous nuclear RNA. These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some may shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has three repeats of quasi-RRM domains that bind to RNA and is very similar to the family member HNRPF. This gene may be associated with hereditary lymphedema type I. Alternatively spliced transcript variants have been described [provided by RefSeq, Mar 2012] |
HNRNPH3 Geneheterogeneous nuclear ribonucleoprotein H3 (2H9) This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two repeats of quasi-RRM domains that bind to RNAs. It is localized in nuclear bodies of the nucleus. This protein is involved in the splicing process and it also participates in early heat shock-induced splicing arrest by transiently leaving the hnRNP complexes. Several alternatively spliced transcript variants have been noted for this gene, however, not all are fully characterized. [provided by RefSeq, Jul 2008] |
HNRNPH2 Geneheterogeneous nuclear ribonucleoprotein H2 (H') This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has three repeats of quasi-RRM domains that binds to RNAs. It is very similar to the family member HNRPH1. This gene is thought to be involved in Fabray disease and X-linked agammaglobulinemia phenotype. Alternative splicing results in multiple transcript variants encoding the same protein. Read-through transcription between this locus and the ribosomal protein L36a gene has been observed. [provided by RefSeq, Jan 2011] |
RNU7-19P GeneRNA, U7 small nuclear 19 pseudogene |
RNU7-78P GeneRNA, U7 small nuclear 78 pseudogene |
HNRNPUL2 Geneheterogeneous nuclear ribonucleoprotein U-like 2 Enables RNA binding activity. Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPUL1 Geneheterogeneous nuclear ribonucleoprotein U-like 1 This gene encodes a nuclear RNA-binding protein of the heterogeneous nuclear ribonucleoprotein (hnRNP) family. This protein binds specifically to adenovirus early-1B-55kDa oncoprotein. It may play an important role in nucleocytoplasmic RNA transport, and its function is modulated by early-1B-55kDa in adenovirus-infected cells. [provided by RefSeq, Mar 2016] |
RNU4ATAC GeneRNA, U4atac small nuclear (U12-dependent splicing) The small nuclear RNA (snRNA) encoded by this gene is part of the U12-dependent minor spliceosome complex. In addition to the encoded RNA, this ribonucleoprotein complex consists of U11, U12, U5, and U6atac snRNAs. The U12-dependent spliceosome acts on approximately 700 specific introns in the human genome. Defects in this gene are a cause of microcephalic osteodysplastic primordial dwarfism type 1 (MOPD). [provided by RefSeq, Jul 2011] |
LOC613037 Genenuclear pore complex interacting protein pseudogene Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
RPRD2 Generegulation of nuclear pre-mRNA domain containing 2 Predicted to enable RNA polymerase II complex binding activity. Predicted to be involved in mRNA 3'-end processing. Part of transcription preinitiation complex. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-25P GeneRNA, U7 small nuclear 25 pseudogene |
NUFIP1P Genenuclear fragile X mental retardation protein interacting protein 1 pseudogene |
C1DP4 GeneC1D nuclear receptor corepressor pseudogene 4 |
GEMIN8P1 Genegem (nuclear organelle) associated protein 8 pseudogene 1 |
RNU7-81P GeneRNA, U7 small nuclear 81 pseudogene |
RNU6-23P GeneRNA, U6 small nuclear 23, pseudogene |
RNU7-10P GeneRNA, U7 small nuclear 10 pseudogene |
RNU7-20P GeneRNA, U7 small nuclear 20 pseudogene |
PCNAP2 Geneproliferating cell nuclear antigen pseudogene 2 |
RNU7-6P GeneRNA, U7 small nuclear 6 pseudogene |
RNU7-77P GeneRNA, U7 small nuclear 77 pseudogene |
NFRKB Genenuclear factor related to kappaB binding protein Enables protease binding activity. Involved in several processes, including chromatin remodeling; regulation of chromosome organization; and regulation of nucleobase-containing compound metabolic process. Located in Ino80 complex and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
NFX1 Genenuclear transcription factor, X-box binding 1 MHC class II gene expression is controlled primarily at the transcriptional level by transcription factors that bind to the X and Y boxes, two highly conserved elements in the proximal promoter of MHC class II genes. The protein encoded by this gene is a transcriptional repressor capable of binding to the conserved X box motif of HLA-DRA and other MHC class II genes in vitro. The protein may play a role in regulating the duration of an inflammatory response by limiting the period in which class II MHC molecules are induced by IFN-gamma. Three alternative splice variants, each of which encodes a different isoform, have been identified. [provided by RefSeq, Jul 2008] |
RN7SK GeneRNA, 7SK small nuclear Predicted to be involved in negative regulation of transcription elongation by RNA polymerase II. Part of 7SK snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
PCBD2 Genepterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 Predicted to enable 4-alpha-hydroxytetrahydrobiopterin dehydratase activity. Involved in positive regulation of DNA-templated transcription. Located in mitochondrion. [provided by Alliance of Genome Resources, Mar 2025] |
NMTRS-TGA1-1 Genenuclear-encoded mitochondrial transfer RNA-Ser (TGA) 1-1 |
LOC100421402 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene |
NFE4 Genenuclear factor, erythroid 4 The erythroid-specific protein encoded by this gene, and the ubiquitous transcription factor CP2, form the stage selector protein (SSP) complex, which is involved in preferential expression of the gamma-globin genes in fetal erythroid cells. Alternate use of an in-frame upstream non-AUG (CUG) translation initiation codon, and a downstream AUG codon, results in two isoforms. While the long isoform (22 kDa) acts as an activator, the short isoform (14 kDa) has been shown to repress gamma-globin gene expression. This gene is located in an intron of the FBXL13 gene on the opposite strand. [provided by RefSeq, Jul 2008] |
NFE2 Genenuclear factor, erythroid 2 Enables WW domain binding activity; identical protein binding activity; and sequence-specific double-stranded DNA binding activity. Contributes to cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including labyrinthine layer blood vessel development; negative regulation of bone mineralization; and positive regulation of peptidyl-lysine acetylation. Part of RNA polymerase II transcription regulator complex and protein-DNA complex. [provided by Alliance of Genome Resources, Mar 2025] |
PABPN1 Genepoly(A) binding protein, nuclear 1 This gene encodes an abundant nuclear protein that binds with high affinity to nascent poly(A) tails. The protein is required for progressive and efficient polymerization of poly(A) tails at the 3' ends of eukaryotic transcripts and controls the size of the poly(A) tail to about 250 nt. At steady-state, this protein is localized in the nucleus whereas a different poly(A) binding protein is localized in the cytoplasm. This gene contains a GCG trinucleotide repeat at the 5' end of the coding region, and expansion of this repeat from the normal 6 copies to 8-13 copies leads to autosomal dominant oculopharyngeal muscular dystrophy (OPMD) disease. Related pseudogenes have been identified on chromosomes 19 and X. Read-through transcription also exists between this gene and the neighboring upstream BCL2-like 2 (BCL2L2) gene. [provided by RefSeq, Dec 2010] |
NR2F6 Genenuclear receptor subfamily 2, group F, member 6 Enables DNA-binding transcription factor activity and sequence-specific double-stranded DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
NR2F1 Genenuclear receptor subfamily 2, group F, member 1 The protein encoded by this gene is a nuclear hormone receptor and transcriptional regulator. The encoded protein acts as a homodimer and binds to 5'-AGGTCA-3' repeats. Defects in this gene are a cause of Bosch-Boonstra optic atrophy syndrome (BBOAS). [provided by RefSeq, Apr 2014] |
NR2F2 Genenuclear receptor subfamily 2, group F, member 2 This gene encodes a member of the steroid thyroid hormone superfamily of nuclear receptors. The encoded protein is a ligand inducible transcription factor that is involved in the regulation of many different genes. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Mar 2010] |
RNU5D-1 GeneRNA, U5D small nuclear 1 Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U5 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
TPR Genetranslocated promoter region, nuclear basket protein This gene encodes a large coiled-coil protein that forms intranuclear filaments attached to the inner surface of nuclear pore complexes (NPCs). The protein directly interacts with several components of the NPC. It is required for the nuclear export of mRNAs and some proteins. Oncogenic fusions of the 5' end of this gene with several different kinase genes occur in some neoplasias. [provided by RefSeq, Jul 2008] |
RNU4-6P GeneRNA, U4 small nuclear 6, pseudogene |
SET GeneSET nuclear proto-oncogene The protein encoded by this gene inhibits acetylation of nucleosomes, especially histone H4, by histone acetylases (HAT). This inhibition is most likely accomplished by masking histone lysines from being acetylated, and the consequence is to silence HAT-dependent transcription. The encoded protein is part of a complex localized to the endoplasmic reticulum but is found in the nucleus and inhibits apoptosis following attack by cytotoxic T lymphocytes. This protein can also enhance DNA replication of the adenovirus genome. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011] |
HNRNPCP10 Geneheterogeneous nuclear ribonucleoprotein C pseudogene 10 |
LOC100303749 GeneLSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene |
CTDNEP1 GeneCTD nuclear envelope phosphatase 1 Enables protein serine/threonine phosphatase activity. Involved in several processes, including positive regulation of triglyceride biosynthetic process; protein dephosphorylation; and protein localization to nucleus. Located in endoplasmic reticulum membrane; lipid droplet; and nuclear membrane. Part of Nem1-Spo7 phosphatase complex. [provided by Alliance of Genome Resources, Mar 2025] |
NMTRQ-TTG11-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 11-1 |
SNRNP70 Genesmall nuclear ribonucleoprotein 70kDa (U1) Enables U1 snRNA binding activity. Involved in mRNA splicing, via spliceosome and regulation of RNA splicing. Located in nucleoplasm. Part of U1 snRNP and spliceosomal complex. Implicated in disease of mental health and systemic lupus erythematosus. Biomarker of Alzheimer's disease. [provided by Alliance of Genome Resources, Mar 2025] |
NUMA1 Genenuclear mitotic apparatus protein 1 This gene encodes a large protein that forms a structural component of the nuclear matrix. The encoded protein interacts with microtubules and plays a role in the formation and organization of the mitotic spindle during cell division. Chromosomal translocation of this gene with the RARA (retinoic acid receptor, alpha) gene on chromosome 17 have been detected in patients with acute promyelocytic leukemia. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2013] |
RNU7-49P GeneRNA, U7 small nuclear 49 pseudogene |
RNU5E-1 GeneRNA, U5E small nuclear 1 Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U5 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU1-21P GeneRNA, U1 small nuclear 21, pseudogene |
LOC100131261 Geneproline-rich nuclear receptor coactivator 2 pseudogene |
RNU7-44P GeneRNA, U7 small nuclear 44 pseudogene |
NR4A2 Genenuclear receptor subfamily 4, group A, member 2 This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. The encoded protein may act as a transcription factor. Mutations in this gene have been associated with disorders related to dopaminergic dysfunction, including Parkinson disease, schizophernia, and manic depression. Misregulation of this gene may be associated with rheumatoid arthritis. Alternatively spliced transcript variants have been described, but their biological validity has not been determined. [provided by RefSeq, Jul 2008] |
NR4A3 Genenuclear receptor subfamily 4, group A, member 3 This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. The encoded protein may act as a transcriptional activator. The protein can efficiently bind the NGFI-B Response Element (NBRE). Three different versions of extraskeletal myxoid chondrosarcomas (EMCs) are the result of reciprocal translocations between this gene and other genes. The translocation breakpoints are associated with Nuclear Receptor Subfamily 4, Group A, Member 3 (on chromosome 9) and either Ewing Sarcome Breakpoint Region 1 (on chromosome 22), RNA Polymerase II, TATA Box-Binding Protein-Associated Factor, 68-KD (on chromosome 17), or Transcription factor 12 (on chromosome 15). Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2010] |
NR4A1 Genenuclear receptor subfamily 4, group A, member 1 This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. Expression is induced by phytohemagglutinin in human lymphocytes and by serum stimulation of arrested fibroblasts. The encoded protein acts as a nuclear transcription factor. Translocation of the protein from the nucleus to mitochondria induces apoptosis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2011] |
TP53INP1 Genetumor protein p53 inducible nuclear protein 1 Predicted to enable antioxidant activity. Involved in autophagic cell death; positive regulation of DNA-templated transcription; and positive regulation of autophagy. Located in autophagosome; cytosol; and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
TP53INP2 Genetumor protein p53 inducible nuclear protein 2 The protein encoded by this gene promotes autophagy and is essential for proper autophagosome formation and processing. In addition, the encoded protein can enhance rDNA transcription by helping in the assembly of the POLR1/RNA polymerase I preinitiation complex. Finally, this protein serves as a transcriptional activator for some genes. [provided by RefSeq, Jul 2016] |
RNU7-87P GeneRNA, U7 small nuclear 87 pseudogene |
NSRP1P1 Genenuclear speckle splicing regulatory protein 1 pseudogene 1 |
RNU7-12P GeneRNA, U7 small nuclear 12 pseudogene |
RNU6ATAC GeneRNA, U6atac small nuclear (U12-dependent splicing) Predicted to enable U4atac snRNA binding activity and pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition and spliceosomal tri-snRNP complex assembly. Predicted to be part of U6atac snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPA1P37 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 37 |
HNRNPA1P36 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 36 |
HNRNPA1P35 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 35 |
HNRNPA1P34 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 34 |
HNRNPA1P33 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 33 |
HNRNPA1P39 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 39 |
HNRNPA1P38 Geneheterogeneous nuclear ribonucleoprotein A1pseudogene 38 |
NMTRL-TAA3-1 Genenuclear-encoded mitochondrial transfer RNA-Leu (TAA) 3-1 |
RNU5B-6P GeneRNA, U5B small nuclear 6, pseudogene |
RNU7-57P GeneRNA, U7 small nuclear 57 pseudogene |
RNU6-52P GeneRNA, U6 small nuclear 52, pseudogene |
HNRNPA1P43 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 43 |
LOC100421387 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene |
NRBF2P1 Genenuclear receptor binding factor 2 pseudogene 1 |
NRBF2P3 Genenuclear receptor binding factor 2 pseudogene 3 |
NRBF2P2 Genenuclear receptor binding factor 2 pseudogene 2 |
NEMF Genenuclear export mediator factor This gene encodes a component of the ribosome quality control complex. The encoded protein facilitates the recognition and ubiquitination of stalled 60S subunits by the ubiquitin ligase listerin. A similar protein in fly functions as a tumor suppressor. [provided by RefSeq, Jul 2016] |
RNU7-88P GeneRNA, U7 small nuclear 88 pseudogene |
LOC101060275 Genenuclear pore complex-interacting protein family member B4-like |
NMTRQ-TTG10-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 10-1 |
RN7SKP10 GeneRNA, 7SK small nuclear pseudogene 10 |
HNRNPLP2 Geneheterogeneous nuclear ribonucleoprotein L pseudogene 2 |
HNRNPLP1 Geneheterogeneous nuclear ribonucleoprotein L pseudogene 1 |
NCOR1P1 Genenuclear receptor corepressor 1 pseudogene 1 |
NCOR1P3 Genenuclear receptor corepressor 1 pseudogene 3 |
BA395L14.12 Genesmall nuclear ribonucleoprotein polypeptide A' pseudogene |
RNU6-58P GeneRNA, U6 small nuclear 58, pseudogene |
RNU5E-9P GeneRNA, U5E small nuclear 9, pseudogene |
C1D GeneC1D nuclear receptor corepressor The protein encoded by this gene is a DNA binding and apoptosis-inducing protein and is localized in the nucleus. It is also a Rac3-interacting protein which acts as a corepressor for the thyroid hormone receptor. This protein is thought to regulate TRAX/Translin complex formation. Alternate splicing results in multiple transcript variants that encode the same protein. Multiple pseudogenes of this gene are found on chromosome 10.[provided by RefSeq, Jun 2010] |
NPIPA8 Genenuclear pore complex interacting protein family, member A8 |
NPIPA5 Genenuclear pore complex interacting protein family, member A5 |
NPIPA7 Genenuclear pore complex interacting protein family, member A7 |
NPIPA1 Genenuclear pore complex interacting protein family, member A1 Predicted to be involved in mRNA transport and protein transport. Predicted to be located in nuclear membrane. Predicted to be part of nuclear pore. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPA2 Genenuclear pore complex interacting protein family, member A2 Predicted to be involved in mRNA transport and protein transport. Predicted to be located in nuclear membrane. Predicted to be part of nuclear pore. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPA3 Genenuclear pore complex interacting protein family, member A3 |
RNU7-73P GeneRNA, U7 small nuclear 73 pseudogene |
RNU6V GeneRNA, U6 small nuclear variant sequence with SNRPE pseudogene sequence |
RNU5E-5P GeneRNA, U5E small nuclear 5, pseudogene |
SNRPGP10 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 10 |
SNRPGP15 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 15 Predicted to contribute to RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of SMN-Sm protein complex and nucleus. Predicted to be active in P granule. [provided by Alliance of Genome Resources, Mar 2025] |
NMTRQ-TTG9-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 9-1 |
RNU1-17P GeneRNA, U1 small nuclear 17, pseudogene |
RNU2-2P GeneRNA, U2 small nuclear 2, pseudogene |
RNU5F-2P GeneRNA, U5F small nuclear 2, pseudogene |
RNU7-74P GeneRNA, U7 small nuclear 74 pseudogene |
MDM1 GeneMdm1 nuclear protein homolog (mouse) This gene encodes a microtubule-binding nuclear protein that localizes to the centrioles of dividing cells and differentiating multiciliated cells and negatively regulates centriole duplication. The encoded protein is closely associated with the centriole barrel, and resides in the centriole lumen. Naturally-occurring mutations in the orthologous mouse gene are associated with age-related retinal degeneration. [provided by RefSeq, Feb 2019] |
RNU6-50P GeneRNA, U6 small nuclear 50, pseudogene |
ARNTL2 Genearyl hydrocarbon receptor nuclear translocator-like 2 This gene encodes a basic helix-loop-helix transcription factor belonging to the PAS (PER, ARNT, SIM) superfamily. The PAS proteins play important roles in adaptation to low atmospheric and cellular oxygen levels, exposure to certain environmental pollutants, and diurnal oscillations in light and temperature. This protein forms a transcriptionally active heterodimer with the circadian CLOCK protein, the structurally related MOP4, and hypoxia-inducible factors, such as HIF1alpha. Consistent with its role as a biologically relevant partner of circadian and hypoxia factors, this protein is coexpressed in regions of the brain such as the thalamus, hypothalamus, and amygdala. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Oct 2011] |
LOC441228 Geneexportin, tRNA (nuclear export receptor for tRNAs) pseudogene |
CTRCT27 GeneCataract, congenital, nuclear progressive |
PNRC1 Geneproline-rich nuclear receptor coactivator 1 Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Predicted to be active in P-body and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
PNRC2 Geneproline-rich nuclear receptor coactivator 2 Involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Located in Golgi apparatus; P-body; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
RNU5E-2P GeneRNA, U5E small nuclear 2, pseudogene |
NMTRL-TAA6-1 Genenuclear-encoded mitochondrial transfer RNA-Leu (TAA) 6-1 |
SNRNP25 Genesmall nuclear ribonucleoprotein 25kDa (U11/U12) Two types of spliceosomes catalyze splicing of pre-mRNAs. The major U2-type spliceosome is found in all eukaryotes and removes U2-type introns, which represent more than 99% of pre-mRNA introns. The minor U12-type spliceosome is found in some eukaryotes and removes U12-type introns, which are rare and have distinct splice consensus signals. The U12-type spliceosome consists of several small nuclear RNAs and associated proteins. This gene encodes a 25K protein that is a component of the U12-type spliceosome. [provided by RefSeq, Apr 2010] |
SNRNP27 Genesmall nuclear ribonucleoprotein 27kDa (U4/U6.U5) This gene encodes a serine/arginine-rich (SR) protein. SR proteins play important roles in pre-mRNA splicing by facilitating the recognition and selection of splice sites. The encoded protein associates with the 25S U4/U6.U5 tri-snRNP, a major component of the U2-type spiceosome. The expression of this gene may be altered in cells infected with the human T-cell lymphotropic virus type 1 (HTLV-1) retrovirus. A pseudogene of this gene is located on the long arm of chromosome 5. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Feb 2011] |
LCOR Geneligand dependent nuclear receptor corepressor LCOR is a transcriptional corepressor widely expressed in fetal and adult tissues that is recruited to agonist-bound nuclear receptors through a single LxxLL motif, also referred to as a nuclear receptor (NR) box (Fernandes et al., 2003 [PubMed 12535528]).[supplied by OMIM, Mar 2008] |
RNU6-82P GeneRNA, U6 small nuclear 82, pseudogene |
RNU1-24P GeneRNA, U1 small nuclear 24, pseudogene |
NFKBIL1 Genenuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 This gene encodes a divergent member of the I-kappa-B family of proteins. Its function has not been determined. The gene lies within the major histocompatibility complex (MHC) class I region on chromosome 6. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2009] |
RNU7-43P GeneRNA, U7 small nuclear 43 pseudogene |
MNS1 Genemeiosis-specific nuclear structural 1 This gene encodes a protein highly similar to the mouse meiosis-specific nuclear structural 1 protein. The mouse protein was shown to be expressed at the pachytene stage during spermatogenesis and may function as a nuclear skeletal protein to regulate nuclear morphology during meiosis. [provided by RefSeq, Oct 2008] |
NXT2 Genenuclear transport factor 2-like export factor 2 The protein encoded by this gene contains a nuclear transport factor 2 (NTF2) domain, which plays an important role in the trafficking of macromolecules, ions, and small molecules between the cytoplasm and nucleus. This protein may also have a role in mRNA nuclear export. Alternatively spliced transcript variants encoding different isoforms have been noted for this gene. [provided by RefSeq, Jun 2011] |
NXT1 Genenuclear transport factor 2-like export factor 1 The protein encoded by this gene is located in the nuclear envelope. It has protein similarity to nuclear transport factor 2. This protein functions as a nuclear export factor in both RAN (Ras-related nuclear protein)- and CRM1 (required for chromosome region maintenance)-dependent pathways. It is found to stimulate the export of U1 snRNA in RAN- and CRM1-dependent pathways and the export of tRNA and mRNA in a CRM1-independent pathway. The encoded protein heterodimerizes with Tap protein and may regulate the ability of Tap protein to mediate nuclear mRNA export. The use of alternate polyadenylation sites has been found for this gene. [provided by RefSeq, Jul 2008] |
NCOA4P1 Genenuclear receptor coactivator 4 pseudogene 1 |
RNU7-66P GeneRNA, U7 small nuclear 66 pseudogene |
NR2C2 Genenuclear receptor subfamily 2, group C, member 2 This gene encodes a protein that belongs to the nuclear hormone receptor family. Members of this family act as ligand-activated transcription factors and function in many biological processes such as development, cellular differentiation and homeostasis. The activated receptor/ligand complex is translocated to the nucleus where it binds to hormone response elements of target genes. The protein encoded by this gene plays a role in protecting cells from oxidative stress and damage induced by ionizing radiation. The lack of a similar gene in mouse results in growth retardation, severe spinal curvature, subfertility, premature aging, and prostatic intraepithelial neoplasia (PIN) development. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2014] |
NR2C1 Genenuclear receptor subfamily 2, group C, member 1 This gene encodes a nuclear hormone receptor characterized by a highly conserved DNA binding domain (DBD), a variable hinge region, and a carboxy-terminal ligand binding domain (LBD) that is typical for all members of the steroid/thyroid hormone receptor superfamily. This protein also belongs to a large family of ligand-inducible transcription factors that regulate gene expression by binding to specific DNA sequences within promoters of target genes. Multiple alternatively spliced transcript variants have been described, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Jul 2008] |
RNU6-19P GeneRNA, U6 small nuclear 19, pseudogene |
RNU4-3P GeneRNA, U4 small nuclear 3, pseudogene |
NUGGC Genenuclear GTPase, germinal center associated Enables GTPase activity. Involved in cellular response to lipopolysaccharide; negative regulation of apoptotic process; and regulation of nuclear cell cycle DNA replication. Predicted to be located in nuclear speck. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100288093 Genenuclear RNA export factor 3 pseudogene |
RNU6-16P GeneRNA, U6 small nuclear 16, pseudogene |
RNU7-9P GeneRNA, U7 small nuclear 9 pseudogene |
LOC105378594 Genenuclear speckle splicing regulatory protein 1-like |
HNRNPA1L2 Geneheterogeneous nuclear ribonucleoprotein A1-like 2 Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in cytoplasm and nucleus. Predicted to be part of catalytic step 2 spliceosome. [provided by Alliance of Genome Resources, Mar 2025] |
LOC728333 Genenuclear receptor coactivator 4 pseudogene |
NCBP1 Genenuclear cap binding protein subunit 1, 80kDa The product of this gene is a component of the nuclear cap-binding protein complex (CBC), which binds to the monomethylated 5' cap of nascent pre-mRNA in the nucleoplasm. The encoded protein promotes high-affinity mRNA-cap binding and associates with the CTD of RNA polymerase II. The CBC promotes pre-mRNA splicing, 3'-end processing, RNA nuclear export, and nonsense-mediated mRNA decay. [provided by RefSeq, Jul 2008] |
NCBP2 Genenuclear cap binding protein subunit 2, 20kDa The product of this gene is a component of the nuclear cap-binding protein complex (CBC), which binds to the monomethylated 5' cap of nascent pre-mRNA in the nucleoplasm. The encoded protein has an RNP domain commonly found in RNA binding proteins, and contains the cap-binding activity. The CBC promotes pre-mRNA splicing, 3'-end processing, RNA nuclear export, and nonsense-mediated mRNA decay. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
RNU7-82P GeneRNA, U7 small nuclear 82 pseudogene |
RNU7-17P GeneRNA, U7 small nuclear 17 pseudogene |
LOC401703 GeneU2 small nuclear RNA auxiliary factor 1-like 4 pseudogene |
LCORL Geneligand dependent nuclear receptor corepressor-like This gene encodes a transcription factor that appears to function in spermatogenesis. Polymorphisms in this gene are associated with measures of skeletal frame size and adult height. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009] |
RNU6-6P GeneRNA, U6 small nuclear 6, pseudogene Predicted to be located in nuclear speck. [provided by Alliance of Genome Resources, Mar 2025] |
NMTRP-TGG1-1 Genenuclear-encoded mitochondrial transfer RNA-Pro (TGG) 1-1 |
RNVU1-20 GeneRNA, variant U1 small nuclear 20 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
LOC105369271 Genenuclear pore complex-interacting protein family member B7-like |
NRBF2 Genenuclear receptor binding factor 2 Involved in autophagy. Located in cytoplasm and phosphatidylinositol 3-kinase complex, class III. [provided by Alliance of Genome Resources, Mar 2025] |
RNU4-1 GeneRNA, U4 small nuclear 1 Predicted to enable U6 snRNA binding activity. Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4 snRNP and U4/U6 x U5 tri-snRNP complex. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-37P GeneRNA, U7 small nuclear 37 pseudogene |
NCOR2 Genenuclear receptor corepressor 2 This gene encodes a nuclear receptor co-repressor that mediates transcriptional silencing of certain target genes. The encoded protein is a member of a family of thyroid hormone- and retinoic acid receptor-associated co-repressors. This protein acts as part of a multisubunit complex which includes histone deacetylases to modify chromatin structure that prevents basal transcriptional activity of target genes. Aberrant expression of this gene is associated with certain cancers. Alternate splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Apr 2011] |
NCOR1 Genenuclear receptor corepressor 1 This gene encodes a protein that mediates ligand-independent transcription repression of thyroid-hormone and retinoic-acid receptors by promoting chromatin condensation and preventing access of the transcription machinery. It is part of a complex which also includes histone deacetylases and transcriptional regulators similar to the yeast protein Sin3p. This gene is located between the Charcot-Marie-Tooth and Smith-Magenis syndrome critical regions on chromosome 17. Alternate splicing results in multiple transcript variants. Pseudogenes of this gene are found on chromosomes 17 and 20.[provided by RefSeq, Jun 2010] |
HNRNPA3P16 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 16 |
HNRNPA3P14 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 14 |
HNRNPA3P13 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 13 |
HNRNPA3P12 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 12 |
HNRNPA3P11 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 11 |
HNRNPA3P10 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 10 |
LOC100130001 Genesmall nuclear ribonucleoprotein polypeptide B pseudogene |
RNU7-18P GeneRNA, U7 small nuclear 18 pseudogene |
NFE2L3P1 Genenuclear factor, erythroid 2-like 3 pseudogene 1 |
NPAP1P5 Genenuclear pore associated protein 1 pseudogene 5 |
RNU1-14P GeneRNA, U1 small nuclear 14, pseudogene |
LOC150417 Genesmall nuclear ribonucleoprotein polypeptide A' pseudogene |
HNRNPA1P29 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 29 |
RNU6ATAC2P GeneRNA, U6atac small nuclear 2, pseudogene |
RNU5F-5P GeneRNA, U5F small nuclear 5, pseudogene |
SNRPA1 Genesmall nuclear ribonucleoprotein polypeptide A' Enables RNA binding activity. Involved in mRNA splicing, via spliceosome and spermatogenesis. Located in nuclear speck. Part of U2-type catalytic step 2 spliceosome and U2-type precatalytic spliceosome. Implicated in connective tissue disease. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-71P GeneRNA, U7 small nuclear 71 pseudogene |
HNRNPDLP4 Geneheterogeneous nuclear ribonucleoprotein D-like pseudogene 4 |
PCBD1 Genepterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha This gene encodes a member of the pterin-4-alpha-carbinolamine dehydratase family. The encoded protein has been identified as a moonlighting protein based on its ability to perform mechanistically distinct functions. The encoded protein functions as both a dehydratase involved in tetrahydrobiopterin biosynthesis, and as a cofactor for HNF1A-dependent transcription. A deficiency of this enzyme leads to hyperphenylalaninemia. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014] |
RNVU1-3 GeneRNA, variant U1 small nuclear 3 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100420798 Genepoly(A) binding protein, nuclear 1 pseudogene |
RNU6-68P GeneRNA, U6 small nuclear 68, pseudogene |
RNU6-57P GeneRNA, U6 small nuclear 57, pseudogene |
BLZF1 Genebasic leucine zipper nuclear factor 1 Enables ubiquitin protein ligase binding activity. Acts upstream of or within Golgi organization and Golgi to plasma membrane protein transport. Located in Golgi apparatus and nucleoplasm. Biomarker of hepatocellular carcinoma. [provided by Alliance of Genome Resources, Mar 2025] |
LOC100129099 Geneproline-rich nuclear receptor coactivator 2 pseudogene |
LSM7 GeneLSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004] |
LSM1 GeneLSM1, U6 small nuclear RNA associated This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Increased expression of this gene may play a role in cellular transformation and the progression of several malignancies including lung cancer, mesothelioma and breast cancer. Alternatively spliced transcript variants have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 9. [provided by RefSeq, Nov 2011] |
LSM2 GeneLSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Pseudogenes of this gene are located on the short arm of chromosomes 6 and 19. [provided by RefSeq, Nov 2011] |
RNU6-72P GeneRNA, U6 small nuclear 72, pseudogene |
NEAT1 Genenuclear paraspeckle assembly transcript 1 (non-protein coding) This gene produces a long non-coding RNA (lncRNA) transcribed from the multiple endocrine neoplasia locus. This lncRNA is retained in the nucleus where it forms the core structural component of the paraspeckle sub-organelles. It may act as a transcriptional regulator for numerous genes, including some genes involved in cancer progression. [provided by RefSeq, Mar 2015] |
RNU5E-7P GeneRNA, U5E small nuclear 7, pseudogene |
RNU12 GeneRNA, U12 small nuclear Predicted to enable pre-mRNA branch point binding activity. Predicted to be involved in negative regulation of neuron apoptotic process. Predicted to act upstream of or within RNA splicing. Predicted to be part of U12 snRNP. Implicated in autosomal recessive spinocerebellar ataxia 33. [provided by Alliance of Genome Resources, Mar 2025] |
RNU11 GeneRNA, U11 small nuclear Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to act upstream of or within RNA splicing. Predicted to be part of U11 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU4-8P GeneRNA, U4 small nuclear 8, pseudogene |
RNU7-58P GeneRNA, U7 small nuclear 58 pseudogene |
RNU5A-7P GeneRNA, U5A small nuclear 7, pseudogene |
RNU7-23P GeneRNA, U7 small nuclear 23 pseudogene |
DCANP1 Genedendritic cell-associated nuclear protein This intronless gene is specifically expressed in dendritic cells (DCs), which are potent antigen-presenting cells involved in activating naive T cells to initiate antigen-specific immune response. The encoded protein is localized mainly in the perinucleus. One of the alleles (A/T) of this gene, that causes premature translation termination at aa 117, has been associated with an increased prevalence of major depression in humans. [provided by RefSeq, Jul 2008] |
NR1H5P Genenuclear receptor subfamily 1, group H, member 5, pseudogene |
SNRPEP9 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 9 |
SNRPEP8 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 8 |
SNRPEP5 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 5 |
SNRPEP4 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 4 |
SNRPEP7 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 7 |
SNRPEP6 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 6 |
SNRPEP1 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 1 |
SNRPEP3 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 3 |
SNRPEP2 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 2 |
HNRNPA3P6 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 6 |
HNRNPA3P5 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 5 |
SNRPCP1 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 1 |
LOC730069 Genenuclear receptor binding factor 2 pseudogene |
RNU7-89P GeneRNA, U7 small nuclear 89 pseudogene |
NMTRL-TAA2-1 Genenuclear-encoded mitochondrial transfer RNA-Leu (TAA) 2-1 |
LOC100421349 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene |
RNU7-61P GeneRNA, U7 small nuclear 61 pseudogene |
HNRNPA1P51 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 51 |
HNRNPA1P53 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 53 |
HNRNPA1P52 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 52 |
HNRNPA1P55 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 55 |
HNRNPA1P58 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 58 |
RNU7-63P GeneRNA, U7 small nuclear 63 pseudogene |
SNRPGP2 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 2 |
RNU12-2P GeneRNA, U12 small nuclear 2, pseudogene |
NPAP1 Genenuclear pore associated protein 1 This intronless retrogene is located in the Prader-Willi syndrome region on chromosome 15. This gene exhibits tissue-specific imprinting. Expression in adult testis and brain is biallelic, while expression in fetal brain is monoallelic and only from the paternal chromosome. The encoded protein is associated with the nuclear pore complex. [provided by RefSeq, Mar 2021] |
NR1H4 Genenuclear receptor subfamily 1, group H, member 4 This gene encodes a ligand-activated transcription factor that shares structural features in common with nuclear hormone receptor family members. This protein functions as a receptor for bile acids, and when bound to bile acids, binds to DNA and regulates the expression of genes involved in bile acid synthesis and transport. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Feb 2016] |
NR1H2 Genenuclear receptor subfamily 1, group H, member 2 The liver X receptors, LXRA (NR1H3; MIM 602423) and LXRB, form a subfamily of the nuclear receptor superfamily and are key regulators of macrophage function, controlling transcriptional programs involved in lipid homeostasis and inflammation. The inducible LXRA is highly expressed in liver, adrenal gland, intestine, adipose tissue, macrophages, lung, and kidney, whereas LXRB is ubiquitously expressed. Ligand-activated LXRs form obligate heterodimers with retinoid X receptors (RXRs; see MIM 180245) and regulate expression of target genes containing LXR response elements (summary by Korf et al., 2009 [PubMed 19436111]).[supplied by OMIM, Jan 2010] |
PCNPP2 GenePEST containing nuclear protein pseudogene 2 |
NVL Genenuclear VCP-like This gene encodes a member of the AAA (ATPases associated with diverse cellular activities) superfamily. Multiple transcript variants encoding different isoforms have been found for this gene. Two encoded proteins, described as major and minor isoforms, have been localized to distinct regions of the nucleus. The largest encoded protein (major isoform) has been localized to the nucleolus and shown to participate in ribosome biosynthesis (PMID: 15469983, 16782053), while the minor isoform has been localized to the nucleoplasmin. [provided by RefSeq, Aug 2011] |
SNRPEP10 Genesmall nuclear ribonucleoprotein polypeptide E pseudogene 10 |
LOC100420528 GeneCTD nuclear envelope phosphatase 1 pseudogene |
NMTRQ-TTG1-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 1-1 |
NMTRQ-TTG15-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 15-1 |
RNU7-46P GeneRNA, U7 small nuclear 46 pseudogene |
NR3C2 Genenuclear receptor subfamily 3, group C, member 2 This gene encodes the mineralocorticoid receptor, which mediates aldosterone actions on salt and water balance within restricted target cells. The protein functions as a ligand-dependent transcription factor that binds to mineralocorticoid response elements in order to transactivate target genes. Mutations in this gene cause autosomal dominant pseudohypoaldosteronism type I, a disorder characterized by urinary salt wasting. Defects in this gene are also associated with early onset hypertension with severe exacerbation in pregnancy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009] |
NR3C1 Genenuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) This gene encodes glucocorticoid receptor, which can function both as a transcription factor that binds to glucocorticoid response elements in the promoters of glucocorticoid responsive genes to activate their transcription, and as a regulator of other transcription factors. This receptor is typically found in the cytoplasm, but upon ligand binding, is transported into the nucleus. It is involved in inflammatory responses, cellular proliferation, and differentiation in target tissues. Mutations in this gene are associated with generalized glucocorticoid resistance. Alternative splicing of this gene results in transcript variants encoding either the same or different isoforms. Additional isoforms resulting from the use of alternate in-frame translation initiation sites have also been described, and shown to be functional, displaying diverse cytoplasm-to-nucleus trafficking patterns and distinct transcriptional activities (PMID:15866175). [provided by RefSeq, Feb 2011] |
RNU5A-1 GeneRNA, U5A small nuclear 1 Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U5 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
NFE2L3 Genenuclear factor, erythroid 2-like 3 This gene encodes a member of the cap 'n' collar basic-region leucine zipper family of transcription factors. The encoded protein heterodimerizes with small musculoaponeurotic fibrosarcoma factors to bind antioxidant response elements in target genes. This protein is a membrane bound glycoprotein that is targeted to the endoplasmic reticulum and the nuclear envelope. Pseudogenes of this gene are found on chromosomes 16, 17, and 18. [provided by RefSeq, Mar 2009] |
NFE2L2 Genenuclear factor, erythroid 2-like 2 This gene encodes a transcription factor which is a member of a small family of basic leucine zipper (bZIP) proteins. The encoded transcription factor regulates genes which contain antioxidant response elements (ARE) in their promoters; many of these genes encode proteins involved in response to injury and inflammation which includes the production of free radicals. Multiple transcript variants encoding different isoforms have been characterized for this gene. [provided by RefSeq, Sep 2015] |
NFE2L1 Genenuclear factor, erythroid 2-like 1 This gene encodes a protein that is involved in globin gene expression in erythrocytes. Confusion has occurred in bibliographic databases due to the shared symbol of NRF1 for this gene, NFE2L1, and for `nuclear respiratory factor 1` which has an official symbol of NRF1. [provided by RefSeq, Jul 2008] |
RNU6-35P GeneRNA, U6 small nuclear 35, pseudogene |
SNRPD2P2 Genesmall nuclear ribonucleoprotein D2 pseudogene 2 |
SNRPD2P1 Genesmall nuclear ribonucleoprotein D2 pseudogene 1 |
NR1H3 Genenuclear receptor subfamily 1, group H, member 3 The protein encoded by this gene belongs to the NR1 subfamily of the nuclear receptor superfamily. The NR1 family members are key regulators of macrophage function, controlling transcriptional programs involved in lipid homeostasis and inflammation. This protein is highly expressed in visceral organs, including liver, kidney and intestine. It forms a heterodimer with retinoid X receptor (RXR), and regulates expression of target genes containing retinoid response elements. Studies in mice lacking this gene suggest that it may play an important role in the regulation of cholesterol homeostasis. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011] |
LOC105369248 Genenuclear pore complex-interacting protein family member B5-like |
RNU7-40P GeneRNA, U7 small nuclear 40 pseudogene |
RNU7-69P GeneRNA, U7 small nuclear 69 pseudogene |
RNU7-34P GeneRNA, U7 small nuclear 34 pseudogene |
HNRNPA3P7 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 7 |
HNRNPA3P3 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 3 |
RNU5B-4P GeneRNA, U5B small nuclear 4, pseudogene |
HNRNPA3P9 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 9 |
HNRNPA3P8 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 8 |
RNU7-55P GeneRNA, U7 small nuclear 55 pseudogene |
NCBP2L Genenuclear cap binding protein subunit 2-like Predicted to enable RNA cap binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of nuclear cap binding activity complex. [provided by Alliance of Genome Resources, Mar 2025] |
RNU5A-3P GeneRNA, U5A small nuclear 3, pseudogene |
HNF4G Genehepatocyte nuclear factor 4, gamma Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in several cellular components, including intercellular bridge; mitotic spindle; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
HNF4A Genehepatocyte nuclear factor 4, alpha The protein encoded by this gene is a nuclear transcription factor which binds DNA as a homodimer. The encoded protein controls the expression of several genes, including hepatocyte nuclear factor 1 alpha, a transcription factor which regulates the expression of several hepatic genes. This gene may play a role in development of the liver, kidney, and intestines. Mutations in this gene have been associated with monogenic autosomal dominant non-insulin-dependent diabetes mellitus type I. Alternative splicing of this gene results in multiple transcript variants encoding several different isoforms. [provided by RefSeq, Apr 2012] |
LOC100133316 Generequired for meiotic nuclear division 1 homolog (S. cerevisiae) pseudogene |
RNU7-26P GeneRNA, U7 small nuclear 26 pseudogene |
SNRPN Genesmall nuclear ribonucleoprotein polypeptide N This gene is located within the Prader-Willi Syndrome critical region on chromosome 15 and is imprinted and expressed from the paternal allele. It encodes a component of the small nuclear ribonucleoprotein complex, which functions in pre-mRNA processing and may contribute to tissue-specific alternative splicing. Alternative promoter use and alternative splicing result in a multitude of transcript variants encoding the same protein. Transcript variants that initiate at the CpG island-associated imprinting center may be bicistronic and also encode the SNRPN upstream reading frame protein (SNURF) from an upstream open reading frame. In addition, long spliced transcripts for small nucleolar RNA host gene 14 (SNHG14) may originate from the promoters at this locus and share exons with this gene. Alterations in this region are associated with parental imprint switch failure, which may cause Angelman syndrome or Prader-Willi syndrome. [provided by RefSeq, Mar 2017] |
SNRPB Genesmall nuclear ribonucleoprotein polypeptides B and B1 The protein encoded by this gene is one of several nuclear proteins that are found in common among U1, U2, U4/U6, and U5 small ribonucleoprotein particles (snRNPs). These snRNPs are involved in pre-mRNA splicing, and the encoded protein may also play a role in pre-mRNA splicing or snRNP structure. Autoantibodies from patients with systemic lupus erythematosus frequently recognize epitopes on the encoded protein. Two transcript variants encoding different isoforms (B and B') have been found for this gene. [provided by RefSeq, Jul 2008] |
SNRPC Genesmall nuclear ribonucleoprotein polypeptide C This gene encodes one of the specific protein components of the U1 small nuclear ribonucleoprotein (snRNP) particle required for the formation of the spliceosome. The encoded protein participates in the processing of nuclear precursor messenger RNA splicing. snRNP particles are attacked by autoantibodies frequently produced by patients with connective tissue diseases. The genome contains several pseudogenes of this functional gene. Alternative splicing results in a non-coding transcript variant.[provided by RefSeq, Oct 2009] |
SNRPA Genesmall nuclear ribonucleoprotein polypeptide A The protein encoded by this gene associates with stem loop II of the U1 small nuclear ribonucleoprotein, which binds the 5' splice site of precursor mRNAs and is required for splicing. The encoded protein autoregulates itself by polyadenylation inhibition of its own pre-mRNA via dimerization and has been implicated in the coupling of splicing and polyadenylation. [provided by RefSeq, Oct 2010] |
SNRPF Genesmall nuclear ribonucleoprotein polypeptide F Enables RNA binding activity. Involved in spliceosomal snRNP assembly. Located in cytosol and nucleus. Part of several cellular components, including methylosome; nucleus; and pICln-Sm protein complex. Biomarker of nasopharynx carcinoma. [provided by Alliance of Genome Resources, Mar 2025] |
SNRPG Genesmall nuclear ribonucleoprotein polypeptide G The protein encoded by this gene is a component of the U1, U2, U4, and U5 small nuclear ribonucleoprotein complexes, precursors of the spliceosome. The encoded protein may also be a part of the U7 small nuclear ribonucleoprotein complex, which participates in the processing of the 3' end of histone transcripts. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015] |
SNRPE Genesmall nuclear ribonucleoprotein polypeptide E The protein encoded by this gene is a core component of U small nuclear ribonucleoproteins, which are key components of the pre-mRNA processing spliceosome. The encoded protein plays a role in the 3' end processing of histone transcripts. This protein is one of the targets in the autoimmune disease systemic lupus erythematosus, and mutations in this gene have been associated with hypotrichosis. Several pseudogenes of this gene have been identified. [provided by RefSeq, Jun 2016] |
NMTRQ-TTG14-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 14-1 |
NFIL3 Genenuclear factor, interleukin 3 regulated The protein encoded by this gene is a transcriptional regulator that binds as a homodimer to activating transcription factor (ATF) sites in many cellular and viral promoters. The encoded protein represses PER1 and PER2 expression and therefore plays a role in the regulation of circadian rhythm. Three transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Feb 2014] |
RNVU1-8 GeneRNA, variant U1 small nuclear 8 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-4 GeneRNA, variant U1 small nuclear 4 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-6 GeneRNA, variant U1 small nuclear 6 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be located in nucleus. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-7 GeneRNA, variant U1 small nuclear 7 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNVU1-1 GeneRNA, variant U1 small nuclear 1 |
U2AF1 GeneU2 small nuclear RNA auxiliary factor 1 This gene belongs to the splicing factor SR family of genes. U2 auxiliary factor, comprising a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the small subunit which plays a critical role in both constitutive and enhancer-dependent RNA splicing by directly mediating interactions between the large subunit and proteins bound to the enhancers. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008] |
U2AF2 GeneU2 small nuclear RNA auxiliary factor 2 U2 auxiliary factor (U2AF), comprised of a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the U2AF large subunit which contains a sequence-specific RNA-binding region with 3 RNA recognition motifs and an Arg/Ser-rich domain necessary for splicing. The large subunit binds to the polypyrimidine tract of introns early during spliceosome assembly. Multiple transcript variants have been detected for this gene, but the full-length natures of only two have been determined to date. [provided by RefSeq, Jul 2008] |
NARF Genenuclear prelamin A recognition factor Several proteins have been found to be prenylated and methylated at their carboxyl-terminal ends. Prenylation was initially believed to be important only for membrane attachment. However, another role for prenylation appears to be its importance in protein-protein interactions. The only nuclear proteins known to be prenylated in mammalian cells are prelamin A- and B-type lamins. Prelamin A is farnesylated and carboxymethylated on the cysteine residue of a carboxyl-terminal CaaX motif. This post-translationally modified cysteine residue is removed from prelamin A when it is endoproteolytically processed into mature lamin A. The protein encoded by this gene binds to the prenylated prelamin A carboxyl-terminal tail domain. It may be a component of a prelamin A endoprotease complex. The encoded protein is located in the nucleus, where it partially colocalizes with the nuclear lamina. It shares limited sequence similarity with iron-only bacterial hydrogenases. Alternatively spliced transcript variants encoding different isoforms have been identified for this gene, including one with a novel exon that is generated by RNA editing. [provided by RefSeq, Jul 2008] |
HNRNPA3P4 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 4 |
HNRNPA3P2 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 2 |
HNRNPA3P1 Geneheterogeneous nuclear ribonucleoprotein A3 pseudogene 1 This locus shares sequence similarity with heterogeneous nuclear ribonuclear proteins and represents an apparent transcribed pseudogene of the HNRPA3 gene, which maps to chromosome 2. [provided by RefSeq, Jul 2008] |
RNU6-75P GeneRNA, U6 small nuclear 75, pseudogene |
RNU5E-4P GeneRNA, U5E small nuclear 4, pseudogene |
TINF2 GeneTERF1 (TRF1)-interacting nuclear factor 2 This gene encodes one of the proteins of the shelterin, or telosome, complex which protects telomeres by allowing the cell to distinguish between telomeres and regions of DNA damage. The protein encoded by this gene is a critical part of shelterin; it interacts with the three DNA-binding proteins of the shelterin complex, and it is important for assembly of the complex. Mutations in this gene cause dyskeratosis congenita (DKC), an inherited bone marrow failure syndrome. [provided by RefSeq, Mar 2010] |
SNRPCP19 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 19 |
SNRPCP18 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 18 |
SNRPCP15 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 15 |
SNRPCP14 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 14 |
SNRPCP12 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 12 |
SNRPCP11 Genesmall nuclear ribonucleoprotein polypeptide C pseudogene 11 |
NRF1 Genenuclear respiratory factor 1 This gene encodes a protein that homodimerizes and functions as a transcription factor which activates the expression of some key metabolic genes regulating cellular growth and nuclear genes required for respiration, heme biosynthesis, and mitochondrial DNA transcription and replication. The protein has also been associated with the regulation of neurite outgrowth. Alternative splicing results in multiple transcript variants. Confusion has occurred in bibliographic databases due to the shared symbol of NRF1 for this gene and for `nuclear factor (erythroid-derived 2)-like 1` which has an official symbol of NFE2L1. [provided by RefSeq, May 2014] |
NFYAP1 Genenuclear transcription factor Y, alpha pseudogene 1 |
RNU1-11P GeneRNA, U1 small nuclear 11, pseudogene |
RNU7-7P GeneRNA, U7 small nuclear 7 pseudogene |
RNU6-81P GeneRNA, U6 small nuclear 81, pseudogene |
HNRNPRP1 Geneheterogeneous nuclear ribonucleoprotein R pseudogene 1 |
HNRNPRP2 Geneheterogeneous nuclear ribonucleoprotein R pseudogene 2 |
HNRNPRP3 Geneheterogeneous nuclear ribonucleoprotein R pseudogene 3 |
RNU7-76P GeneRNA, U7 small nuclear 76 pseudogene |
RNU4-2 GeneRNA, U4 small nuclear 2 Predicted to enable U6 snRNA binding activity. Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4 snRNP and U4/U6 x U5 tri-snRNP complex. [provided by Alliance of Genome Resources, Mar 2025] |
LOC392364 Genenuclear pore associated protein 1 pseudogene |
PCNAP3 Geneproliferating cell nuclear antigen pseudogene 3 |
SNRPFP4 Genesmall nuclear ribonucleoprotein polypeptide F pseudogene 4 |
SNRPFP2 Genesmall nuclear ribonucleoprotein polypeptide F pseudogene 2 |
SNRPFP1 Genesmall nuclear ribonucleoprotein polypeptide F pseudogene 1 |
SP140 GeneSP140 nuclear body protein This gene encodes a member of the SP100 family of proteins, which are share common domains including an N-terminal homogeneously staining region domain followed by a SP100/autoimmune regulator/NucP41/P75/deformed epidermal autoregulatory factor domain, a plant homeobox zinc finger, and a bromodomain. The encoded protein is interferon-inducible and is expressed at high levels in the nuclei of leukocytes. Variants of this gene have been associated with multiple sclerosis, Crohn's disease, and chronic lymphocytic leukemia. Alternative splicing results in multiple variants. [provided by RefSeq, Aug 2016] |
NR1I3 Genenuclear receptor subfamily 1, group I, member 3 This gene encodes a member of the nuclear receptor superfamily, and is a key regulator of xenobiotic and endobiotic metabolism. The protein binds to DNA as a monomer or a heterodimer with the retinoid X receptor and regulates the transcription of target genes involved in drug metabolism and bilirubin clearance, such as cytochrome P450 family members. Unlike most nuclear receptors, this transcriptional regulator is constitutively active in the absence of ligand but is regulated by both agonists and inverse agonists. Ligand binding results in translocation of this protein to the nucleus, where it activates or represses target gene transcription. These ligands include bilirubin, a variety of foreign compounds, steroid hormones, and prescription drugs. In addition to drug metabolism, the CAR protein is also reported to regulate genes involved in glucose metabolism, lipid metabolism, cell proliferation, and circadian clock regulation. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2020] |
NR1I2 Genenuclear receptor subfamily 1, group I, member 2 This gene product belongs to the nuclear receptor superfamily, members of which are transcription factors characterized by a ligand-binding domain and a DNA-binding domain. The encoded protein is a transcriptional regulator of the cytochrome P450 gene CYP3A4, binding to the response element of the CYP3A4 promoter as a heterodimer with the 9-cis retinoic acid receptor RXR. It is activated by a range of compounds that induce CYP3A4, including dexamethasone and rifampicin. Several alternatively spliced transcripts encoding different isoforms, some of which use non-AUG (CUG) translation initiation codon, have been described for this gene. Additional transcript variants exist, however, they have not been fully characterized. [provided by RefSeq, Jul 2008] |
NPIPB9 Genenuclear pore complex interacting protein family, member B9 |
SNIP1 GeneSmad nuclear interacting protein 1 This gene encodes a protein that contains a coiled-coil motif and C-terminal forkhead-associated (FHA) domain. The encoded protein functions as a transcriptional coactivator that increases c-Myc activity and inhibits transforming growth factor beta (TGF-beta) and nuclear factor kappa-B (NF-kB) signaling. The encoded protein also regulates the stability of cyclin D1 mRNA, and may play a role in cell proliferation and cancer progression. Mutations in this gene are a cause of psychomotor retardation, epilepsy, and craniofacial dysmorphism (PMRED). [provided by RefSeq, Mar 2012] |
RNU4-5P GeneRNA, U4 small nuclear 5, pseudogene |
SNRPGP3 Genesmall nuclear ribonucleoprotein polypeptide G pseudogene 3 |
LOC100129492 Genesmall nuclear ribonucleoprotein Sm D1 pseudogene |
RNU4-10P GeneRNA, U4 small nuclear 10, pseudogene |
LOC101929240 GeneU5 small nuclear ribonucleoprotein 200 kDa helicase pseudogene |
HNRNPA1P74 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 74 |
RNU1-19P GeneRNA, U1 small nuclear 19, pseudogene |
RNU6-14P GeneRNA, U6 small nuclear 14, pseudogene |
RNU5F-8P GeneRNA, U5F small nuclear 8, pseudogene |
RNU7-45P GeneRNA, U7 small nuclear 45 pseudogene |
RNU7-84P GeneRNA, U7 small nuclear 84 pseudogene |
ARNT Genearyl hydrocarbon receptor nuclear translocator This gene encodes a protein containing a basic helix-loop-helix domain and two characteristic PAS domains along with a PAC domain. The encoded protein binds to ligand-bound aryl hydrocarbon receptor and aids in the movement of this complex to the nucleus, where it promotes the expression of genes involved in xenobiotic metabolism. This protein is also a co-factor for transcriptional regulation by hypoxia-inducible factor 1. Chromosomal translocation of this locus with the ETV6 (ets variant 6) gene on chromosome 12 have been described in leukemias. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2013] |
SSNA1 GeneSjogren syndrome nuclear autoantigen 1 Enables identical protein binding activity and microtubule binding activity. Involved in axonogenesis; cell division; and microtubule nucleation. Located in several cellular components, including axoneme; microtubule organizing center; and midbody. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-30P GeneRNA, U6 small nuclear 30, pseudogene |
HNRNPA2B1 Geneheterogeneous nuclear ribonucleoprotein A2/B1 This gene belongs to the A/B subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two repeats of quasi-RRM domains that bind to RNAs. This gene has been described to generate two alternatively spliced transcript variants which encode different isoforms. [provided by RefSeq, Jul 2008] |
RNU6-78P GeneRNA, U6 small nuclear 78, pseudogene |
RNU7-39P GeneRNA, U7 small nuclear 39 pseudogene |
RNU7-64P GeneRNA, U7 small nuclear 64 pseudogene |
LOC100533852 Genenuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) pseudogene |
HNRNPA1P20 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 20 |
HNRNPA1P21 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 21 |
HNRNPA1P22 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 22 |
HNRNPA1P23 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 23 |
HNRNPA1P24 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 24 |
HNRNPA1P25 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 25 |
HNRNPA1P26 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 26 |
HNRNPA1P27 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 27 |
HNRNPA1P28 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 28 |
RNU7-70P GeneRNA, U7 small nuclear 70 pseudogene |
NFATC3 Genenuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 The product of this gene is a member of the nuclear factors of activated T cells DNA-binding transcription complex. This complex consists of at least two components: a preexisting cytosolic component that translocates to the nucleus upon T cell receptor (TCR) stimulation and an inducible nuclear component. Other members of this family participate to form this complex also. The product of this gene plays a role in the regulation of gene expression in T cells and immature thymocytes. Several transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Nov 2010] |
HNRNPKP5 Geneheterogeneous nuclear ribonucleoprotein K pseudogene 5 |
HNRNPKP4 Geneheterogeneous nuclear ribonucleoprotein K pseudogene 4 |
HNRNPKP1 Geneheterogeneous nuclear ribonucleoprotein K pseudogene 1 |
HNRNPKP3 Geneheterogeneous nuclear ribonucleoprotein K pseudogene 3 |
HNRNPKP2 Geneheterogeneous nuclear ribonucleoprotein K pseudogene 2 |
RNU7-56P GeneRNA, U7 small nuclear 56 pseudogene |
NR0B2 Genenuclear receptor subfamily 0, group B, member 2 The protein encoded by this gene is an unusual orphan receptor that contains a putative ligand-binding domain but lacks a conventional DNA-binding domain. The gene product is a member of the nuclear hormone receptor family, a group of transcription factors regulated by small hydrophobic hormones, a subset of which do not have known ligands and are referred to as orphan nuclear receptors. The protein has been shown to interact with retinoid and thyroid hormone receptors, inhibiting their ligand-dependent transcriptional activation. In addition, interaction with estrogen receptors has been demonstrated, leading to inhibition of function. Studies suggest that the protein represses nuclear hormone receptor-mediated transactivation via two separate steps: competition with coactivators and the direct effects of its transcriptional repressor function. [provided by RefSeq, Jul 2008] |
NR0B1 Genenuclear receptor subfamily 0, group B, member 1 This gene encodes a protein that contains a DNA-binding domain. The encoded protein acts as a dominant-negative regulator of transcription which is mediated by the retinoic acid receptor. This protein also functions as an anti-testis gene by acting antagonistically to Sry. Mutations in this gene result in both X-linked congenital adrenal hypoplasia and hypogonadotropic hypogonadism. [provided by RefSeq, Jul 2008] |
RNU5F-1 GeneRNA, U5F small nuclear 1 Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U5 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
C1DP1 GeneC1D nuclear receptor corepressor pseudogene 1 |
C1DP3 GeneC1D nuclear receptor corepressor pseudogene 3 |
NPIPB11 Genenuclear pore complex interacting protein family, member B11 Predicted to act upstream of or within prevention of polyspermy. Predicted to be located in external side of plasma membrane and sperm head plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB1P Genenuclear pore complex interacting protein family, member B1, pseudogene |
RMND5A Generequired for meiotic nuclear division 5 homolog A (S. cerevisiae) Predicted to enable metal ion binding activity and ubiquitin protein ligase activity. Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Located in cytoplasm and nucleoplasm. Part of ubiquitin ligase complex. [provided by Alliance of Genome Resources, Mar 2025] |
RMND5B Generequired for meiotic nuclear division 5 homolog B (S. cerevisiae) Predicted to enable metal ion binding activity and ubiquitin protein ligase activity. Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Located in cytosol. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-15P GeneRNA, U7 small nuclear 15 pseudogene |
NFKBIA Genenuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha This gene encodes a member of the NF-kappa-B inhibitor family, which contain multiple ankrin repeat domains. The encoded protein interacts with REL dimers to inhibit NF-kappa-B/REL complexes which are involved in inflammatory responses. The encoded protein moves between the cytoplasm and the nucleus via a nuclear localization signal and CRM1-mediated nuclear export. Mutations in this gene have been found in ectodermal dysplasia anhidrotic with T-cell immunodeficiency autosomal dominant disease. [provided by RefSeq, Aug 2011] |
RNU1-1 GeneRNA, U1 small nuclear 1 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU1-4 GeneRNA, U1 small nuclear 4 Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-59P GeneRNA, U6 small nuclear 59, pseudogene |
RNU7-31P GeneRNA, U7 small nuclear 31 pseudogene |
LOC105379766 Genesmall nuclear ribonucleoprotein-associated protein N-like |
TOE1 Genetarget of EGR1, member 1 (nuclear) Enables poly(A)-specific ribonuclease activity and snRNA binding activity. Involved in snRNA 3'-end processing. Located in Cajal body and cytoplasm. Implicated in pontocerebellar hypoplasia type 7. [provided by Alliance of Genome Resources, Mar 2025] |
RNU5B-2P GeneRNA, U5B small nuclear 2, pseudogene |
RNU5E-3P GeneRNA, U5E small nuclear 3, pseudogene |
RNU7-50P GeneRNA, U7 small nuclear 50 pseudogene |
NPIPB3 Genenuclear pore complex interacting protein family, member B3 Predicted to be located in nuclear envelope. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB4 Genenuclear pore complex interacting protein family, member B4 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB7 Genenuclear pore complex interacting protein family, member B7 Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB6 Genenuclear pore complex interacting protein family, member B6 |
NPIPB8 Genenuclear pore complex interacting protein family, member B8 |
RNU5A-6P GeneRNA, U5A small nuclear 6, pseudogene |
LSG1 Genelarge 60S subunit nuclear export GTPase 1 This gene encodes a protein related to the yeast large subunit GTPase 1. The encoded protein is necessary for cell viability and may localize in the endoplasmic reticulum, nucleus and cytoplasm.[provided by RefSeq, Feb 2009] |
HNRNPLL Geneheterogeneous nuclear ribonucleoprotein L-like HNRNPLL is a master regulator of activation-induced alternative splicing in T cells. In particular, it alters splicing of CD45 (PTPRC; MIM 151460), a tyrosine phosphatase essential for T-cell development and activation (Oberdoerffer et al., 2008 [PubMed 18669861]).[supplied by OMIM, Aug 2008] |
RNU5E-10P GeneRNA, U5E small nuclear 10, pseudogene |
RNU7-29P GeneRNA, U7 small nuclear 29 pseudogene |
SNRPBP1 Genesmall nuclear ribonucleoprotein polypeptides B and B1 pseudogene 1 |
NFE2L3P2 Genenuclear factor, erythroid 2-like 3 pseudogene 2 |
HNRNPA1P40 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 40 |
RNU7-79P GeneRNA, U7 small nuclear 79 pseudogene |
RNU6-28P GeneRNA, U6 small nuclear 28, pseudogene |
GEMIN2P2 Genegem (nuclear organelle) associated protein 2 pseudogene 2 |
GEMIN2P1 Genegem (nuclear organelle) associated protein 2 pseudogene 1 |
LOC102725157 Genenuclear pore complex-interacting protein family member B5-like |
SNRPFP3 Genesmall nuclear ribonucleoprotein polypeptide F pseudogene 3 |
RNU2-5P GeneRNA, U2 small nuclear 5, pseudogene |
RHNO1 GeneRAD9-HUS1-RAD1 interacting nuclear orphan 1 Enables chromatin-protein adaptor activity. Involved in several processes, including DNA repair; cellular response to radiation; and regulation of cell cycle process. Located in chromosome and nucleus. Is active in chromatin and site of double-strand break. [provided by Alliance of Genome Resources, Mar 2025] |
RNU5F-3P GeneRNA, U5F small nuclear 3, pseudogene |
NASPP1 Genenuclear autoantigenic sperm protein pseudogene 1 |
LSM10 GeneLSM10, U7 small nuclear RNA associated Enables U7 snRNA binding activity. Involved in positive regulation of G1/S transition of mitotic cell cycle. Located in Cajal body. Part of U7 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
LSM11 GeneLSM11, U7 small nuclear RNA associated Enables U7 snRNA binding activity. Involved in mRNA 3'-end processing by stem-loop binding activity and cleavage; positive regulation of G1/S transition of mitotic cell cycle; and regulation of chromatin organization. Located in nuclear body. Part of U7 snRNP and telomerase holoenzyme complex. Implicated in Aicardi-Goutieres syndrome. [provided by Alliance of Genome Resources, Mar 2025] |
RNU7-48P GeneRNA, U7 small nuclear 48 pseudogene |
HNRNPCL1 Geneheterogeneous nuclear ribonucleoprotein C-like 1 Enables identical protein binding activity. Predicted to be part of ribonucleoprotein complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPCL3 Geneheterogeneous nuclear ribonucleoprotein C-like 3 Predicted to enable RNA binding activity. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPCL2 Geneheterogeneous nuclear ribonucleoprotein C-like 2 Enables identical protein binding activity. Predicted to be part of ribonucleoprotein complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPCL4 Geneheterogeneous nuclear ribonucleoprotein C-like 4 Predicted to enable RNA binding activity. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-42P GeneRNA, U6 small nuclear 42, pseudogene |
LOC100128345 Genenuclear transcription factor Y, gamma pseudogene |
ANP32BP3 Geneacidic (leucine-rich) nuclear phosphoprotein 32 family, member B pseudogene 3 |
HNRNPUP1 Geneheterogeneous nuclear ribonucleoprotein U pseudogene 1 |
HNRNPDL Geneheterogeneous nuclear ribonucleoprotein D-like This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two RRM domains that bind to RNAs. Three alternatively spliced transcript variants have been described for this gene. One of the variants is probably not translated because the transcript is a candidate for nonsense-mediated mRNA decay. The protein isoforms encoded by this gene are similar to its family member HNRPD. [provided by RefSeq, May 2011] |
NMTRQ-CTG1-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (CTG) 1-1 |
LOC100130602 Generegulation of nuclear pre-mRNA domain containing 1A pseudogene |
NUTF2 Genenuclear transport factor 2 This gene encodes a cytosolic factor that facilitates protein transport into the nucleus. The encoded protein is required for nuclear import of the small Ras-like GTPase, Ran which is involved in numerous cellular processes. This protein also interacts with the nuclear pore complex glycoprotein p62. [provided by RefSeq, Apr 2016] |
RNU7-21P GeneRNA, U7 small nuclear 21 pseudogene |
HNRNPDLP2 Geneheterogeneous nuclear ribonucleoprotein D-like pseudogene 2 |
HNRNPDLP1 Geneheterogeneous nuclear ribonucleoprotein D-like pseudogene 1 |
HNRNPA1P32 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 32 |
HNRNPA1P31 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 31 |
HNRNPA1P30 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 30 |
LOC642262 Genenuclear receptor coactivator 4 pseudogene |
NUDCP2 Genenuclear distribution gene C homolog (A. nidulans) pseudogene 2 |
NUDCP1 Genenuclear distribution gene C homolog (A. nidulans) pseudogene 1 |
SNRNP35 Genesmall nuclear ribonucleoprotein 35kDa (U11/U12) The protein encoded by this gene is a homolog of the U1-snRNP binding protein. The N-terminal half contains a RNA recognition motif and the C-terminal half is rich in Arg/Asp and Arg/Glu dipeptides, which is a characteristic of a variety of splicing factors. This protein is a component of the U11/U12 small nuclear ribonucleoproteins (snRNP) that form part of the U12-type spliceosome. Alternative splicing results in multiple transcript variants encoding two distinct isoforms and representing a non-protein coding variant. [provided by RefSeq, Aug 2013] |
NR1I4 Genenuclear receptor subfamily 1, group I, member 4 |
RNU7-3P GeneRNA, U7 small nuclear 3 pseudogene |
RNU7-2P GeneRNA, U7 small nuclear 2 pseudogene |
RNU2-7P GeneRNA, U2 small nuclear 7, pseudogene |
MUSTN1 Genemusculoskeletal, embryonic nuclear protein 1 Predicted to be involved in glucose homeostasis and positive regulation of myoblast differentiation. Predicted to act upstream of or within positive regulation of chondrocyte differentiation; positive regulation of chondrocyte proliferation; and positive regulation of macromolecule biosynthetic process. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
RNU6-33P GeneRNA, U6 small nuclear 33, pseudogene |
LSM3 GeneLSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004] |
SP110 GeneSP110 nuclear body protein The nuclear body is a multiprotein complex that may have a role in the regulation of gene transcription. This gene is a member of the SP100/SP140 family of nuclear body proteins and encodes a leukocyte-specific nuclear body component. The protein can function as an activator of gene transcription and may serve as a nuclear hormone receptor coactivator. In addition, it has been suggested that the protein may play a role in ribosome biogenesis and in the induction of myeloid cell differentiation. Alternative splicing has been observed for this gene and three transcript variants, encoding distinct isoforms, have been identified. [provided by RefSeq, Jul 2008] |
RNU7-67P GeneRNA, U7 small nuclear 67 pseudogene |
LOC101930116 Geneheterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog |
HNRNPA1P73 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 73 |
HNRNPA1P71 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 71 |
HNRNPA1P70 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 70 |
LOC729978 Genenuclear pore complex interacting protein pseudogene Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
LOC105369973 Geneheterogeneous nuclear ribonucleoprotein A1-like |
NMTRQ-TTG4-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 4-1 |
CNEP1R1 GeneCTD nuclear envelope phosphatase 1 regulatory subunit 1 This gene encodes a transmembrane protein that belongs to the Tmemb_18A family. A similar protein in yeast is a component of an endoplasmic reticulum-associated protein phosphatase complex and is thought to play a role in the synthesis of triacylglycerol. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013] |
NMTRQ-TTG5-1 Genenuclear-encoded mitochondrial transfer RNA-Gln (TTG) 5-1 |
BANP GeneBTG3 associated nuclear protein This gene encodes a protein that binds to matrix attachment regions. The protein forms a complex with p53 and negatively regulates p53 transcription, and functions as a tumor suppressor and cell cycle regulator. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2010] |
LOC100128467 Genenuclear distribution protein nudE-like 1-like |
RNU7-83P GeneRNA, U7 small nuclear 83 pseudogene |
RNU7-16P GeneRNA, U7 small nuclear 16 pseudogene |
NFIB Genenuclear factor I/B Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and transcription regulator inhibitor activity. Involved in brain development and regulation of DNA-templated transcription. Located in fibrillar center and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
LOC105371186 Genenuclear pore complex-interacting protein family member A5-like |
LOC105371189 Genenuclear pore complex-interacting protein family member B9-like |
NFIC Genenuclear factor I/C (CCAAT-binding transcription factor) The protein encoded by this gene belongs to the CTF/NF-I family. These are dimeric DNA-binding proteins, and function as cellular transcription factors and as replication factors for adenovirus DNA replication. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Oct 2011] |
NFIA Genenuclear factor I/A This gene encodes a member of the NF1 (nuclear factor 1) family of transcription factors. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011] |
NFIX Genenuclear factor I/X (CCAAT-binding transcription factor) The protein encoded by this gene is a transcription factor that binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3 in viral and cellular promoters. The encoded protein can also stimulate adenovirus replication in vitro. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2012] |
NSD3 Genenuclear receptor binding SET domain protein 3 This gene is related to the Wolf-Hirschhorn syndrome candidate-1 gene and encodes a protein with PWWP (proline-tryptophan-tryptophan-proline) domains. This protein methylates histone H3 at lysine residues 4 and 27, which represses gene transcription. Two alternatively spliced variants have been described. [provided by RefSeq, May 2015] |
SNU13 Genesmall nuclear ribonucleoprotein 13 Originally named because of its sequence similarity to the Saccharomyces cerevisiae NHP2 (non-histone protein 2), this protein appears to be a highly conserved nuclear protein that is a component of the [U4/U6.U5] tri-snRNP. It binds to the 5' stem-loop of U4 snRNA. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008] |
NCBP3 Genenuclear cap binding subunit 3 Enables RNA 7-methylguanosine cap binding activity and mRNA binding activity. Involved in defense response to virus; mRNA export from nucleus; and snRNA export from nucleus. Located in cytoplasm and nuclear speck. Part of nuclear cap binding activity complex. [provided by Alliance of Genome Resources, Mar 2025] |
NSD2 Genenuclear receptor binding SET domain protein 2 This gene encodes a protein that contains four domains present in other developmental proteins: a PWWP domain, an HMG box, a SET domain, and a PHD-type zinc finger. It is expressed ubiquitously in early development. Wolf-Hirschhorn syndrome (WHS) is a malformation syndrome associated with a hemizygous deletion of the distal short arm of chromosome 4. This gene maps to the 165 kb WHS critical region and has also been involved in the chromosomal translocation t(4;14)(p16.3;q32.3) in multiple myelomas. Alternative splicing of this gene results in multiple transcript variants encoding different isoforms. Some transcript variants are nonsense-mediated mRNA (NMD) decay candidates, hence not represented as reference sequences. [provided by RefSeq, Jul 2008] |
HIKESHI Geneheat shock protein nuclear import factor hikeshi This gene encodes an evolutionarily conserved nuclear transport receptor that mediates heat-shock-induced nuclear import of 70 kDa heat-shock proteins (Hsp70s) through interactions with FG-nucleoporins. The protein mediates transport of the ATP form but not the ADP form of Hsp70 proteins under conditions of heat shock stress. Structural analyses demonstrate that the protein forms an asymmetric homodimer and that the N-terminal domain consists of a jelly-roll/beta-sandwich fold structure that contains hydrophobic pockets involved in FG-nucleoporin recognition. Reduction of RNA expression levels in HeLa cells using small interfering RNAs results in inhibition of heat shock-induced nuclear accumulation of Hsp70s, indicating a role for this gene in regulation of Hsp70 nuclear import during heat shock stress. [provided by RefSeq, Apr 2016] |
NEMP1 Genenuclear envelope integral membrane protein 1 Involved in nuclear membrane organization. Predicted to be located in nuclear inner membrane. Predicted to be active in nuclear envelope. [provided by Alliance of Genome Resources, Mar 2025] |
DERPC GeneDERPC proline and glycine rich nuclear protein Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
NEMP2 Genenuclear envelope integral membrane protein 2 Predicted to be located in nuclear inner membrane. Predicted to be active in nuclear envelope. [provided by Alliance of Genome Resources, Mar 2025] |
NUPR2 Genenuclear protein 2, transcriptional regulator Involved in several processes, including cellular response to starvation; negative regulation of cell population proliferation; and negative regulation of transcription by RNA polymerase II. Located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB2 Genenuclear pore complex interacting protein family member B2 Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
GCNA Genegerm cell nuclear acidic peptidase Enables SUMO polymer binding activity. Involved in protein-DNA covalent cross-linking repair. Located in PML body. Implicated in X-linked spermatogenic failure 4. [provided by Alliance of Genome Resources, Mar 2025] |
HNRNPA1L3 Geneheterogeneous nuclear ribonucleoprotein A1 like 3 Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of catalytic step 2 spliceosome. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB13 Genenuclear pore complex interacting protein family, member B13 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB12 Genenuclear pore complex interacting protein family member B12 Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
NPIPB14P Genenuclear pore complex interacting protein family member B14, pseudogene |
HNRNPA1P49 Geneheterogeneous nuclear ribonucleoprotein A1 pseudogene 49 |
RNU6-645P GeneRNA, U6 small nuclear 645, pseudogene |
NPIPA6 Genenuclear pore complex interacting protein family, member A6 |
VCF1 GeneVCP nuclear cofactor family member 1 |
VCF2 GeneVCP nuclear cofactor family member 2 |